RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 BTDP43251 543 aa13.08□□□□□ -0.32
LTBR-203ENST00000441074 CLNS1AP54105 237 aaKnown RBP13.08□□□□□ -0.32
LTBR-203ENST00000441074 NLRP5P59047 1200 aa13.08□□□□□ -0.32
LTBR-203ENST00000441074 ARMC9Q7Z3E5 817 aa13.08□□□□□ -0.32
LTBR-203ENST00000441074 MAATS1Q7Z4T9 603 aa13.08□□□□□ -0.32
LTBR-203ENST00000441074 EIF1ADQ8N9N8 165 aaKnown RBP13.08□□□□□ -0.32
LTBR-203ENST00000441074 P2RX5Q93086 422 aa13.08□□□□□ -0.32
LTBR-203ENST00000441074 MS4A14Q96JA4 679 aa13.08□□□□□ -0.32
LTBR-203ENST00000441074 ZSCAN5CA6NGD5 496 aaPredicted RBP13.07□□□□□ -0.32
LTBR-203ENST00000441074 KIF3CO14782 793 aa13.07□□□□□ -0.32
LTBR-203ENST00000441074 PPP2R5AQ15172 486 aa13.07□□□□□ -0.32
LTBR-203ENST00000441074 PFKFB3Q16875 520 aaPredicted RBP13.07□□□□□ -0.32
LTBR-203ENST00000441074 NBPF9Q3BBW0 867 aa13.07□□□□□ -0.32
LTBR-203ENST00000441074 NAALADL2Q58DX5 795 aa13.07□□□□□ -0.32
LTBR-203ENST00000441074 SPTY2D1Q68D10 685 aaPredicted RBP13.07□□□□□ -0.32
LTBR-203ENST00000441074 C4orf32Q8N8J7 132 aa13.07□□□□□ -0.32
LTBR-203ENST00000441074 SEC16BQ96JE7 1060 aa13.07□□□□□ -0.32
LTBR-203ENST00000441074 SCLT1Q96NL6 688 aa13.07□□□□□ -0.32
LTBR-203ENST00000441074 RTFDC1Q9BY42 306 aaPredicted RBP13.07□□□□□ -0.32
LTBR-203ENST00000441074 SLC12A6Q9UHW9 1150 aa13.07□□□□□ -0.32
LTBR-203ENST00000441074 SALL4Q9UJQ4 1053 aa13.07□□□□□ -0.32
LTBR-203ENST00000441074 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.07□□□□□ -0.32
LTBR-203ENST00000441074 LAMB1P07942 1786 aa13.07□□□□□ -0.32
LTBR-203ENST00000441074 GCOM1H8Y6P7 765 aaPredicted RBP13.07□□□□□ -0.32
LTBR-203ENST00000441074 MGRN1O60291 552 aa13.07□□□□□ -0.32
LTBR-203ENST00000441074 NEBLO76041 1014 aa13.07□□□□□ -0.32
LTBR-203ENST00000441074 MYZAPP0CAP1 466 aa13.07□□□□□ -0.32
LTBR-203ENST00000441074 PAX7P23759 505 aa13.07□□□□□ -0.32
LTBR-203ENST00000441074 CALRP27797 417 aaKnown RBP13.07□□□□□ -0.32
LTBR-203ENST00000441074 HPDP32754 393 aaPredicted RBP13.07□□□□□ -0.32
LTBR-203ENST00000441074 SCTRP47872 440 aa13.07□□□□□ -0.32
LTBR-203ENST00000441074 SPRED3Q2MJR0 410 aa13.07□□□□□ -0.32
LTBR-203ENST00000441074 PIK3AP1Q6ZUJ8 805 aa13.07□□□□□ -0.32
LTBR-203ENST00000441074 C15orf52Q6ZUT6 534 aaKnown RBP13.07□□□□□ -0.32
LTBR-203ENST00000441074 SH3GLB2Q9NR46 395 aa13.07□□□□□ -0.32
LTBR-203ENST00000441074 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.07□□□□□ -0.32
LTBR-203ENST00000441074 DNAJC8O75937 253 aaPredicted RBP13.06□□□□□ -0.32
LTBR-203ENST00000441074 GHRP10912 638 aa13.06□□□□□ -0.32
LTBR-203ENST00000441074 KIF5BP33176 963 aa13.06□□□□□ -0.32
LTBR-203ENST00000441074 SLC8A3P57103 927 aa13.06□□□□□ -0.32
LTBR-203ENST00000441074 BIRC3Q13489 604 aa13.06□□□□□ -0.32
LTBR-203ENST00000441074 ANKRD40Q6AI12 368 aa13.06□□□□□ -0.32
LTBR-203ENST00000441074 CACNA2D3Q8IZS8 1091 aa13.06□□□□□ -0.32
LTBR-203ENST00000441074 SRBD1Q8N5C6 995 aaKnown RBP13.06□□□□□ -0.32
LTBR-203ENST00000441074 MTMR8Q96EF0 704 aa13.06□□□□□ -0.32
LTBR-203ENST00000441074 TRIM6Q9C030 488 aaPredicted RBP13.06□□□□□ -0.32
LTBR-203ENST00000441074 KBTBD4Q9NVX7 518 aa13.06□□□□□ -0.32
LTBR-203ENST00000441074 MTMR7Q9Y216 660 aa13.06□□□□□ -0.32
LTBR-203ENST00000441074 MYH10P35580 1976 aa13.06□□□□□ -0.32
LTBR-203ENST00000441074 G3V3G9 751 aa13.06□□□□□ -0.32
LTBR-203ENST00000441074 H0YGN5 161 aa13.06□□□□□ -0.32
LTBR-203ENST00000441074 SSBP05455 408 aaKnown RBP eCLIP13.06□□□□□ -0.32
LTBR-203ENST00000441074 PAEPP09466 180 aa13.06□□□□□ -0.32
LTBR-203ENST00000441074 MYBP10242 640 aa13.06□□□□□ -0.32
LTBR-203ENST00000441074 PPP1R2P41236 205 aa13.06□□□□□ -0.32
LTBR-203ENST00000441074 PICALMQ13492 652 aa13.06□□□□□ -0.32
LTBR-203ENST00000441074 QPCTQ16769 361 aa13.06□□□□□ -0.32
LTBR-203ENST00000441074 DCAF8Q5TAQ9 597 aa13.06□□□□□ -0.32
LTBR-203ENST00000441074 KRT12Q99456 494 aa13.06□□□□□ -0.32
LTBR-203ENST00000441074 KDM4CQ9H3R0 1056 aa13.06□□□□□ -0.32
LTBR-203ENST00000441074 SIK3Q9Y2K2 1263 aa13.06□□□□□ -0.32
LTBR-203ENST00000441074 NFS1Q9Y697 457 aa13.06□□□□□ -0.32
LTBR-203ENST00000441074 KIF13BQ9NQT8 1826 aa13.06□□□□□ -0.32
LTBR-203ENST00000441074 IBSPP21815 317 aaPredicted RBP13.05□□□□□ -0.32
LTBR-203ENST00000441074 BYSLQ13895 437 aaKnown RBP13.05□□□□□ -0.32
LTBR-203ENST00000441074 AOC3Q16853 763 aa13.05□□□□□ -0.32
LTBR-203ENST00000441074 ASTE1Q2TB18 679 aaPredicted RBP13.05□□□□□ -0.32
LTBR-203ENST00000441074 RUFY4Q6ZNE9 571 aa13.05□□□□□ -0.32
LTBR-203ENST00000441074 TAF1DQ9H5J8 278 aaPredicted RBP13.05□□□□□ -0.32
LTBR-203ENST00000441074 MAGEF1Q9HAY2 307 aa13.05□□□□□ -0.32
LTBR-203ENST00000441074 PIM2Q9P1W9 311 aa13.05□□□□□ -0.32
LTBR-203ENST00000441074 CACNB3P54284 484 aa13.05□□□□□ -0.32
LTBR-203ENST00000441074 IRX1P78414 480 aaPredicted RBP13.05□□□□□ -0.32
LTBR-203ENST00000441074 E2F5Q15329 346 aa13.05□□□□□ -0.32
LTBR-203ENST00000441074 AGBL2Q5U5Z8 902 aa13.05□□□□□ -0.32
LTBR-203ENST00000441074 STYK1Q6J9G0 422 aa13.05□□□□□ -0.32
LTBR-203ENST00000441074 ANKRD13CQ8N6S4 541 aa13.05□□□□□ -0.32
LTBR-203ENST00000441074 MAB21L3Q8N8X9 362 aa13.05□□□□□ -0.32
LTBR-203ENST00000441074 CCT6BQ92526 530 aa13.05□□□□□ -0.32
LTBR-203ENST00000441074 TATDN2Q93075 761 aa13.05□□□□□ -0.32
LTBR-203ENST00000441074 ISCUQ9H1K1 167 aa13.05□□□□□ -0.32
LTBR-203ENST00000441074 COL11A2P13942 1736 aaPredicted RBP13.04□□□□□ -0.32
LTBR-203ENST00000441074 BAZ2AQ9UIF9 1905 aaKnown RBP13.04□□□□□ -0.32
LTBR-203ENST00000441074 SSU72P8A0A1W2PR75 194 aa13.04□□□□□ -0.32
LTBR-203ENST00000441074 HSD17B3P37058 310 aa13.04□□□□□ -0.32
LTBR-203ENST00000441074 PPP2R2AP63151 447 aa13.04□□□□□ -0.32
LTBR-203ENST00000441074 TNNC1P63316 161 aa13.04□□□□□ -0.32
LTBR-203ENST00000441074 RASSF7Q02833 373 aa13.04□□□□□ -0.32
LTBR-203ENST00000441074 RCSD1Q6JBY9 416 aa13.04□□□□□ -0.32
LTBR-203ENST00000441074 KIAA0825Q8IV33 1275 aa13.04□□□□□ -0.32
LTBR-203ENST00000441074 TTLL6Q8N841 843 aa13.04□□□□□ -0.32
LTBR-203ENST00000441074 RASSF8Q8NHQ8 419 aa13.04□□□□□ -0.32
LTBR-203ENST00000441074 CNKSR1Q969H4 720 aa13.04□□□□□ -0.32
LTBR-203ENST00000441074 CCDC47Q96A33 483 aaKnown RBP13.04□□□□□ -0.32
LTBR-203ENST00000441074 LRRC45Q96CN5 670 aa13.04□□□□□ -0.32
LTBR-203ENST00000441074 HOOK2Q96ED9 719 aa13.04□□□□□ -0.32
LTBR-203ENST00000441074 CUEDC2Q9H467 287 aa13.04□□□□□ -0.32
LTBR-203ENST00000441074 ATP8A2Q9NTI2 1148 aa13.04□□□□□ -0.32
LTBR-203ENST00000441074 USP17L3A6NCW0 530 aa13.04□□□□□ -0.32
LTBR-203ENST00000441074 USP17L4A6NCW7 530 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms