RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 KCTD2Q14681 263 aa21.32■■□□□ 1
SNX17-203ENST00000440760 KCNB1Q14721 858 aa21.32■■□□□ 1
SNX17-203ENST00000440760 GTF3C2Q8WUA4 911 aaPredicted RBP21.32■■□□□ 1
SNX17-203ENST00000440760 PPP1R9BQ96SB3 815 aa21.32■■□□□ 1
SNX17-203ENST00000440760 LXNQ9BS40 222 aa21.32■■□□□ 1
SNX17-203ENST00000440760 TUFT1Q9NNX1 390 aa21.32■■□□□ 1
SNX17-203ENST00000440760 CTNND2Q9UQB3 1225 aa21.32■■□□□ 1
SNX17-203ENST00000440760 STK24Q9Y6E0 443 aa21.32■■□□□ 1
SNX17-203ENST00000440760 IGF2BP3O00425 579 aaKnown RBP eCLIP21.31■■□□□ 1
SNX17-203ENST00000440760 IKBKBO14920 756 aa21.31■■□□□ 1
SNX17-203ENST00000440760 CCNE2O96020 404 aa21.31■■□□□ 1
SNX17-203ENST00000440760 FCER1AP12319 257 aa21.31■■□□□ 1
SNX17-203ENST00000440760 EPHA7Q15375 998 aa21.31■■□□□ 1
SNX17-203ENST00000440760 RGMBQ6NW40 437 aa21.31■■□□□ 1
SNX17-203ENST00000440760 IWS1Q96ST2 819 aa21.31■■□□□ 1
SNX17-203ENST00000440760 PARK7Q99497 189 aaKnown RBP21.31■■□□□ 1
SNX17-203ENST00000440760 MROH8Q9H579 483 aa21.31■■□□□ 1
SNX17-203ENST00000440760 TBC1D22BQ9NU19 505 aa21.31■■□□□ 1
SNX17-203ENST00000440760 DNM3Q9UQ16 869 aa21.31■■□□□ 1
SNX17-203ENST00000440760 TELO2Q9Y4R8 837 aa21.31■■□□□ 1
SNX17-203ENST00000440760 SAMM50Q9Y512 469 aa21.31■■□□□ 1
SNX17-203ENST00000440760 SYNRGQ9UMZ2 1314 aa21.31■■□□□ 1
SNX17-203ENST00000440760 IDEP14735 1019 aa21.3■■□□□ 1
SNX17-203ENST00000440760 KCNA2P16389 499 aa21.3■■□□□ 1
SNX17-203ENST00000440760 STXBP2Q15833 593 aa21.3■■□□□ 1
SNX17-203ENST00000440760 HSP90AA4PQ58FG1 418 aa21.3■■□□□ 1
SNX17-203ENST00000440760 BHMT2Q9H2M3 363 aa21.3■■□□□ 1
SNX17-203ENST00000440760 WDR81Q562E7 1941 aa21.3■■□□□ 1
SNX17-203ENST00000440760 PLXNA1Q9UIW2 1896 aa21.3■■□□□ 1
SNX17-203ENST00000440760 SMTNL1A8MU46 457 aa21.3■■□□□ 1
SNX17-203ENST00000440760 CYP11B2P19099 503 aa21.3■■□□□ 1
SNX17-203ENST00000440760 PRCPP42785 496 aa21.3■■□□□ 1
SNX17-203ENST00000440760 SP4Q02446 784 aa21.3■■□□□ 1
SNX17-203ENST00000440760 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.3■■□□□ 1
SNX17-203ENST00000440760 EEPD1Q7L9B9 569 aa21.3■■□□□ 1
SNX17-203ENST00000440760 SHCBP1Q8NEM2 672 aa21.3■■□□□ 1
SNX17-203ENST00000440760 DNAJC19Q96DA6 116 aa21.3■■□□□ 1
SNX17-203ENST00000440760 ADD3Q9UEY8 706 aaKnown RBP21.3■■□□□ 1
SNX17-203ENST00000440760 DNAJC25-GNG10A0A024R161 153 aa21.29■■□□□ 1
SNX17-203ENST00000440760 ATP1A3P13637 1013 aa21.29■■□□□ 1
SNX17-203ENST00000440760 EDNRBP24530 442 aa21.29■■□□□ 1
SNX17-203ENST00000440760 GNPTABQ3T906 1256 aa21.29■■□□□ 1
SNX17-203ENST00000440760 ARSHQ5FYA8 562 aa21.29■■□□□ 1
SNX17-203ENST00000440760 SEPT14Q6ZU15 432 aa21.29■■□□□ 1
SNX17-203ENST00000440760 UNC13DQ70J99 1090 aa21.29■■□□□ 1
SNX17-203ENST00000440760 STAM2O75886 525 aa21.28■■□□□ 1
SNX17-203ENST00000440760 ECM2O94769 699 aaPredicted RBP21.28■■□□□ 1
SNX17-203ENST00000440760 GCLCP48506 637 aaPredicted RBP21.28■■□□□ 1
SNX17-203ENST00000440760 STK4Q13043 487 aa21.28■■□□□ 1
SNX17-203ENST00000440760 UGCGQ16739 394 aa21.28■■□□□ 1
SNX17-203ENST00000440760 GIMAP8Q8ND71 665 aaPredicted RBP21.28■■□□□ 1
SNX17-203ENST00000440760 TRIM5Q9C035 493 aa21.28■■□□□ 1
SNX17-203ENST00000440760 FANCLQ9NW38 375 aa21.28■■□□□ 1
SNX17-203ENST00000440760 MORF4L1Q9UBU8 362 aa21.28■■□□□ 1
SNX17-203ENST00000440760 NFE2L3Q9Y4A8 694 aa21.28■■□□□ 1
SNX17-203ENST00000440760 SLC10A3P09131 477 aa21.28■■□□□ 1
SNX17-203ENST00000440760 CCNA1P78396 465 aa21.28■■□□□ 1
SNX17-203ENST00000440760 SP2Q02086 613 aa21.28■■□□□ 1
SNX17-203ENST00000440760 SYT2Q8N9I0 419 aaPredicted RBP21.28■■□□□ 1
SNX17-203ENST00000440760 KIAA0895Q8NCT3 520 aa21.28■■□□□ 1
SNX17-203ENST00000440760 RUSC1Q9BVN2 902 aa21.28■■□□□ 1
SNX17-203ENST00000440760 TCEAL9Q9UHQ7 104 aa21.28■■□□□ 1
SNX17-203ENST00000440760 ABT1Q9ULW3 272 aaKnown RBP21.28■■□□□ 1
SNX17-203ENST00000440760 TLL2Q9Y6L7 1015 aa21.28■■□□□ 1
SNX17-203ENST00000440760 SPATA31C2B4DYI2 1134 aa21.27■■□□□ 1
SNX17-203ENST00000440760 EIF3JO75822 258 aaKnown RBP21.27■■□□□ 1
SNX17-203ENST00000440760 EYA4O95677 639 aa21.27■■□□□ 1
SNX17-203ENST00000440760 ERCC5P28715 1186 aaPredicted RBP21.27■■□□□ 1
SNX17-203ENST00000440760 CNNM4Q6P4Q7 775 aa21.27■■□□□ 1
SNX17-203ENST00000440760 CCDC47Q96A33 483 aaKnown RBP21.27■■□□□ 1
SNX17-203ENST00000440760 LRRC27Q9C0I9 530 aa21.27■■□□□ 1
SNX17-203ENST00000440760 SLC39A2Q9NP94 309 aa21.27■■□□□ 1
SNX17-203ENST00000440760 KRT18P05783 430 aaKnown RBP21.27■□□□□ 0.99
SNX17-203ENST00000440760 ZNF75DP51815 510 aa21.27■□□□□ 0.99
SNX17-203ENST00000440760 KRT76Q01546 638 aa21.27■□□□□ 0.99
SNX17-203ENST00000440760 COASYQ13057 564 aa21.27■□□□□ 0.99
SNX17-203ENST00000440760 ADSSL1Q8N142 457 aa21.27■□□□□ 0.99
SNX17-203ENST00000440760 SMC1BQ8NDV3 1235 aa21.27■□□□□ 0.99
SNX17-203ENST00000440760 GLIS3Q8NEA6 775 aa21.27■□□□□ 0.99
SNX17-203ENST00000440760 ENOX1Q8TC92 643 aaKnown RBP21.27■□□□□ 0.99
SNX17-203ENST00000440760 NELFBQ8WX92 580 aa21.27■□□□□ 0.99
SNX17-203ENST00000440760 CPA4Q9UI42 421 aa21.27■□□□□ 0.99
SNX17-203ENST00000440760 LOXHD1Q8IVV2 1947 aa21.26■□□□□ 0.99
SNX17-203ENST00000440760 TRIM49BA6NDI0 452 aa21.26■□□□□ 0.99
SNX17-203ENST00000440760 WDR64B1ANS9 1081 aa21.26■□□□□ 0.99
SNX17-203ENST00000440760 MAFGO15525 162 aa21.26■□□□□ 0.99
SNX17-203ENST00000440760 TPM4P67936 248 aa21.26■□□□□ 0.99
SNX17-203ENST00000440760 PAK1Q13153 545 aa21.26■□□□□ 0.99
SNX17-203ENST00000440760 GRM1Q13255 1194 aa21.26■□□□□ 0.99
SNX17-203ENST00000440760 SARM1Q6SZW1 724 aa21.26■□□□□ 0.99
SNX17-203ENST00000440760 CDHR1Q96JP9 859 aa21.26■□□□□ 0.99
SNX17-203ENST00000440760 POLD4Q9HCU8 107 aa21.26■□□□□ 0.99
SNX17-203ENST00000440760 JPH1Q9HDC5 661 aaPredicted RBP21.26■□□□□ 0.99
SNX17-203ENST00000440760 SAMSN1Q9NSI8 373 aaKnown RBP21.26■□□□□ 0.99
SNX17-203ENST00000440760 PVALEFA0A1B0GWK0 134 aa21.25■□□□□ 0.99
SNX17-203ENST00000440760 MANSC4A6NHS7 340 aaPredicted RBP21.25■□□□□ 0.99
SNX17-203ENST00000440760 FAM155AB1AL88 458 aaPredicted RBP21.25■□□□□ 0.99
SNX17-203ENST00000440760 P4HBP07237 508 aaKnown RBP21.25■□□□□ 0.99
SNX17-203ENST00000440760 ADORA2AP29274 412 aa21.25■□□□□ 0.99
SNX17-203ENST00000440760 TRMT1LQ7Z2T5 733 aaKnown RBP21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms