RNA–Protein interactions for RNA: ENST00000440571.5

CNOT3-203, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 1,125 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-203ENST00000440571 PPP4R3AQ6IN85 833 aa25.53■■□□□ 1.68
CNOT3-203ENST00000440571 TRIM43Q96BQ3 446 aaPredicted RBP25.53■■□□□ 1.68
CNOT3-203ENST00000440571 MBOAT7Q96N66 472 aa25.53■■□□□ 1.68
CNOT3-203ENST00000440571 FOXP1Q9H334 677 aaPredicted RBP25.53■■□□□ 1.68
CNOT3-203ENST00000440571 TCEAL9Q9UHQ7 104 aa25.53■■□□□ 1.68
CNOT3-203ENST00000440571 FAM205CA6NFA0 338 aa25.52■■□□□ 1.68
CNOT3-203ENST00000440571 B4GALT4O60513 344 aa25.52■■□□□ 1.68
CNOT3-203ENST00000440571 GLG1Q92896 1179 aa25.52■■□□□ 1.68
CNOT3-203ENST00000440571 SNX21Q969T3 373 aa25.52■■□□□ 1.68
CNOT3-203ENST00000440571 LBHD1Q9BQE6 289 aaPredicted RBP25.52■■□□□ 1.68
CNOT3-203ENST00000440571 SMARCAD1Q9H4L7 1026 aa25.52■■□□□ 1.68
CNOT3-203ENST00000440571 HDAC6Q9UBN7 1215 aa25.52■■□□□ 1.68
CNOT3-203ENST00000440571 ZNF215Q9UL58 517 aaPredicted RBP25.52■■□□□ 1.68
CNOT3-203ENST00000440571 DNAH12Q6ZR08 3092 aa25.52■■□□□ 1.68
CNOT3-203ENST00000440571 K7ELQ4 463 aaPredicted RBP25.51■■□□□ 1.67
CNOT3-203ENST00000440571 KIAA0355O15063 1070 aa25.51■■□□□ 1.67
CNOT3-203ENST00000440571 SESTD1Q86VW0 696 aa25.51■■□□□ 1.67
CNOT3-203ENST00000440571 RIT2Q99578 217 aa25.51■■□□□ 1.67
CNOT3-203ENST00000440571 AZI2Q9H6S1 392 aa25.51■■□□□ 1.67
CNOT3-203ENST00000440571 TRMT13Q9NUP7 481 aaKnown RBP25.51■■□□□ 1.67
CNOT3-203ENST00000440571 MARCH6O60337 910 aa25.5■■□□□ 1.67
CNOT3-203ENST00000440571 GAS7O60861 476 aa25.5■■□□□ 1.67
CNOT3-203ENST00000440571 ATG7O95352 703 aa25.5■■□□□ 1.67
CNOT3-203ENST00000440571 CCNE2O96020 404 aa25.5■■□□□ 1.67
CNOT3-203ENST00000440571 RAG1P15918 1043 aa25.5■■□□□ 1.67
CNOT3-203ENST00000440571 PDE4DIPQ5VU43 2346 aa25.5■■□□□ 1.67
CNOT3-203ENST00000440571 ZNF746Q6NUN9 644 aaPredicted RBP25.5■■□□□ 1.67
CNOT3-203ENST00000440571 TRIM50Q86XT4 487 aa25.5■■□□□ 1.67
CNOT3-203ENST00000440571 SLC5A5Q92911 643 aa25.5■■□□□ 1.67
CNOT3-203ENST00000440571 NOD1Q9Y239 953 aa25.5■■□□□ 1.67
CNOT3-203ENST00000440571 H3BQV1 296 aa25.49■■□□□ 1.67
CNOT3-203ENST00000440571 KRT76Q01546 638 aa25.49■■□□□ 1.67
CNOT3-203ENST00000440571 LRCH2Q5VUJ6 765 aa25.49■■□□□ 1.67
CNOT3-203ENST00000440571 MIS18BP1Q6P0N0 1132 aa25.49■■□□□ 1.67
CNOT3-203ENST00000440571 ABHD15Q6UXT9 468 aa25.49■■□□□ 1.67
CNOT3-203ENST00000440571 TEKT3Q9BXF9 490 aa25.49■■□□□ 1.67
CNOT3-203ENST00000440571 ERAP1Q9NZ08 941 aa25.49■■□□□ 1.67
CNOT3-203ENST00000440571 GTF2IRD1Q9UHL9 959 aa25.49■■□□□ 1.67
CNOT3-203ENST00000440571 TBX21Q9UL17 535 aa25.49■■□□□ 1.67
CNOT3-203ENST00000440571 SLC37A4O43826 429 aa25.48■■□□□ 1.67
CNOT3-203ENST00000440571 LGR5O75473 907 aa25.48■■□□□ 1.67
CNOT3-203ENST00000440571 STAT5BP51692 787 aa25.48■■□□□ 1.67
CNOT3-203ENST00000440571 MDM2Q00987 491 aaPredicted RBP25.48■■□□□ 1.67
CNOT3-203ENST00000440571 PTGISQ16647 500 aa25.48■■□□□ 1.67
CNOT3-203ENST00000440571 LARP1BQ659C4 914 aaKnown RBP25.48■■□□□ 1.67
CNOT3-203ENST00000440571 GDF6Q6KF10 455 aaPredicted RBP25.48■■□□□ 1.67
CNOT3-203ENST00000440571 GJA10Q969M2 543 aa25.48■■□□□ 1.67
CNOT3-203ENST00000440571 FAM20AQ96MK3 541 aa25.48■■□□□ 1.67
CNOT3-203ENST00000440571 RNPEPQ9H4A4 650 aa25.48■■□□□ 1.67
CNOT3-203ENST00000440571 BACH1O14867 736 aa25.47■■□□□ 1.67
CNOT3-203ENST00000440571 TIMP1P01033 207 aa25.47■■□□□ 1.67
CNOT3-203ENST00000440571 SMIM10L2AP0DMW4 78 aa25.47■■□□□ 1.67
CNOT3-203ENST00000440571 SMIM10L2BP0DMW5 78 aa25.47■■□□□ 1.67
CNOT3-203ENST00000440571 ATP2B1P20020 1258 aa25.47■■□□□ 1.67
CNOT3-203ENST00000440571 MAGEA10P43363 369 aaPredicted RBP25.47■■□□□ 1.67
CNOT3-203ENST00000440571 MCTP1Q6DN14 999 aa25.47■■□□□ 1.67
CNOT3-203ENST00000440571 PLPPR4Q7Z2D5 763 aa25.47■■□□□ 1.67
CNOT3-203ENST00000440571 NOSTRINQ8IVI9 506 aa25.47■■□□□ 1.67
CNOT3-203ENST00000440571 HSCBQ8IWL3 235 aa25.47■■□□□ 1.67
CNOT3-203ENST00000440571 SMAP1Q8IYB5 467 aaPredicted RBP25.47■■□□□ 1.67
CNOT3-203ENST00000440571 ETNPPLQ8TBG4 499 aa25.47■■□□□ 1.67
CNOT3-203ENST00000440571 BADQ92934 168 aa25.47■■□□□ 1.67
CNOT3-203ENST00000440571 PCYT2Q99447 389 aa25.47■■□□□ 1.67
CNOT3-203ENST00000440571 PCDH10Q9P2E7 1040 aa25.47■■□□□ 1.67
CNOT3-203ENST00000440571 SAMM50Q9Y512 469 aa25.47■■□□□ 1.67
CNOT3-203ENST00000440571 PSMD10O75832 226 aa25.46■■□□□ 1.67
CNOT3-203ENST00000440571 BAG4O95429 457 aaKnown RBP25.46■■□□□ 1.67
CNOT3-203ENST00000440571 PSAPP07602 524 aa25.46■■□□□ 1.67
CNOT3-203ENST00000440571 CYP2C9P11712 490 aa25.46■■□□□ 1.67
CNOT3-203ENST00000440571 U2AF2P26368 475 aaKnown RBP eCLIP25.46■■□□□ 1.67
CNOT3-203ENST00000440571 MARK3P27448 753 aa25.46■■□□□ 1.67
CNOT3-203ENST00000440571 FAM160B1Q5W0V3 765 aa25.46■■□□□ 1.67
CNOT3-203ENST00000440571 SWSAP1Q6NVH7 229 aa25.46■■□□□ 1.67
CNOT3-203ENST00000440571 INTS4Q96HW7 963 aaKnown RBP25.46■■□□□ 1.67
CNOT3-203ENST00000440571 HIPK3Q9H422 1215 aa25.46■■□□□ 1.67
CNOT3-203ENST00000440571 PCDHA10Q9Y5I2 948 aa25.46■■□□□ 1.67
CNOT3-203ENST00000440571 EMSYQ7Z589 1322 aa25.45■■□□□ 1.66
CNOT3-203ENST00000440571 IGKV6D-21A0A0A0MT36 114 aa25.45■■□□□ 1.66
CNOT3-203ENST00000440571 C17orf102A2RUQ5 167 aa25.45■■□□□ 1.66
CNOT3-203ENST00000440571 WDR64B1ANS9 1081 aa25.45■■□□□ 1.66
CNOT3-203ENST00000440571 TBX3O15119 743 aa25.45■■□□□ 1.66
CNOT3-203ENST00000440571 GNAT1P11488 350 aa25.45■■□□□ 1.66
CNOT3-203ENST00000440571 ITGB8P26012 769 aa25.45■■□□□ 1.66
CNOT3-203ENST00000440571 CHRDL2Q6WN34 429 aa25.45■■□□□ 1.66
CNOT3-203ENST00000440571 TNPO1Q92973 898 aaKnown RBP25.45■■□□□ 1.66
CNOT3-203ENST00000440571 KCNMB3Q9NPA1 279 aa25.45■■□□□ 1.66
CNOT3-203ENST00000440571 ZNF302Q9NR11 478 aa25.45■■□□□ 1.66
CNOT3-203ENST00000440571 DISC1Q9NRI5 854 aa25.45■■□□□ 1.66
CNOT3-203ENST00000440571 MYH7BA7E2Y1 1941 aa25.44■■□□□ 1.66
CNOT3-203ENST00000440571 KIF28PB7ZC32 967 aa25.44■■□□□ 1.66
CNOT3-203ENST00000440571 CHMP2AO43633 222 aa25.44■■□□□ 1.66
CNOT3-203ENST00000440571 ZNF200P98182 395 aaPredicted RBP25.44■■□□□ 1.66
CNOT3-203ENST00000440571 GDF15Q99988 308 aa25.44■■□□□ 1.66
CNOT3-203ENST00000440571 PPP1R12CQ9BZL4 782 aa25.44■■□□□ 1.66
CNOT3-203ENST00000440571 UNC45AQ9H3U1 944 aa25.44■■□□□ 1.66
CNOT3-203ENST00000440571 FOXD4L1Q9NU39 408 aa25.44■■□□□ 1.66
CNOT3-203ENST00000440571 SETD4Q9NVD3 440 aa25.44■■□□□ 1.66
CNOT3-203ENST00000440571 NOL7Q9UMY1 257 aaKnown RBP25.44■■□□□ 1.66
CNOT3-203ENST00000440571 SFNP31947 248 aa25.43■■□□□ 1.66
CNOT3-203ENST00000440571 CYP2C18P33260 490 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms