RNA–Protein interactions for RNA: ENST00000439928.2

SPATA13-213, Transcript of spermatogenesis associated 13, humanhuman

TSL 1 (best) BASIC

Gene SPATA13, Length 1,721 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA13-213ENST00000439928 PDXDC2PQ6P474 469 aa13.6□□□□□ -0.23
SPATA13-213ENST00000439928 POTEBQ6S5H4 581 aa13.6□□□□□ -0.23
SPATA13-213ENST00000439928 MAMDC4Q6UXC1 1216 aa13.6□□□□□ -0.23
SPATA13-213ENST00000439928 SMAP1Q8IYB5 467 aaPredicted RBP13.6□□□□□ -0.23
SPATA13-213ENST00000439928 SCFD2Q8WU76 684 aa13.6□□□□□ -0.23
SPATA13-213ENST00000439928 APBA2Q99767 749 aa13.6□□□□□ -0.23
SPATA13-213ENST00000439928 TINF2Q9BSI4 451 aa13.6□□□□□ -0.23
SPATA13-213ENST00000439928 POLR3CQ9BUI4 534 aaPredicted RBP13.6□□□□□ -0.23
SPATA13-213ENST00000439928 TUFT1Q9NNX1 390 aa13.6□□□□□ -0.23
SPATA13-213ENST00000439928 KIAA1024Q9UPX6 916 aa13.6□□□□□ -0.23
SPATA13-213ENST00000439928 EML1O00423 815 aa13.59□□□□□ -0.23
SPATA13-213ENST00000439928 HOXC6P09630 235 aa13.59□□□□□ -0.23
SPATA13-213ENST00000439928 UBA1P22314 1058 aaKnown RBP13.59□□□□□ -0.23
SPATA13-213ENST00000439928 AFMP43652 599 aa13.59□□□□□ -0.23
SPATA13-213ENST00000439928 GRB10Q13322 594 aa13.59□□□□□ -0.23
SPATA13-213ENST00000439928 TTLL4Q14679 1199 aa13.59□□□□□ -0.23
SPATA13-213ENST00000439928 EPHA7Q15375 998 aa13.59□□□□□ -0.23
SPATA13-213ENST00000439928 HYIQ5T013 277 aa13.59□□□□□ -0.23
SPATA13-213ENST00000439928 SASS6Q6UVJ0 657 aa13.59□□□□□ -0.23
SPATA13-213ENST00000439928 RBM43Q6ZSC3 357 aaKnown RBP13.59□□□□□ -0.23
SPATA13-213ENST00000439928 CATSPER3Q86XQ3 398 aa13.59□□□□□ -0.23
SPATA13-213ENST00000439928 RDM1Q8NG50 284 aa13.59□□□□□ -0.23
SPATA13-213ENST00000439928 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.59□□□□□ -0.23
SPATA13-213ENST00000439928 SLC9A2Q9UBY0 812 aa13.59□□□□□ -0.23
SPATA13-213ENST00000439928 POTEFA5A3E0 1075 aa13.59□□□□□ -0.23
SPATA13-213ENST00000439928 MED24O75448 989 aa13.59□□□□□ -0.23
SPATA13-213ENST00000439928 CCDC192P0DO97 292 aa13.59□□□□□ -0.23
SPATA13-213ENST00000439928 CYP2B6P20813 491 aa13.59□□□□□ -0.23
SPATA13-213ENST00000439928 ZNF445P59923 1031 aa13.59□□□□□ -0.23
SPATA13-213ENST00000439928 AMPD3Q01432 767 aa13.59□□□□□ -0.23
SPATA13-213ENST00000439928 PNOCQ13519 176 aa13.59□□□□□ -0.23
SPATA13-213ENST00000439928 TMEM119Q4V9L6 283 aa13.59□□□□□ -0.23
SPATA13-213ENST00000439928 NAALADL2Q58DX5 795 aa13.59□□□□□ -0.23
SPATA13-213ENST00000439928 POTEGQ6S5H5 508 aa13.59□□□□□ -0.23
SPATA13-213ENST00000439928 B3GNT9Q6UX72 402 aa13.59□□□□□ -0.23
SPATA13-213ENST00000439928 CYFIP1Q7L576 1253 aa13.59□□□□□ -0.23
SPATA13-213ENST00000439928 TPH2Q8IWU9 490 aa13.59□□□□□ -0.23
SPATA13-213ENST00000439928 KCTD17Q8N5Z5 321 aa13.59□□□□□ -0.23
SPATA13-213ENST00000439928 NPLOC4Q8TAT6 608 aa13.59□□□□□ -0.23
SPATA13-213ENST00000439928 LARP4BQ92615 738 aaKnown RBP13.59□□□□□ -0.23
SPATA13-213ENST00000439928 PAGE5Q96GU1 130 aa13.59□□□□□ -0.23
SPATA13-213ENST00000439928 PNMA5Q96PV4 448 aa13.59□□□□□ -0.23
SPATA13-213ENST00000439928 ABHD16BQ9H3Z7 469 aa13.59□□□□□ -0.23
SPATA13-213ENST00000439928 KIAA1468Q9P260 1216 aa13.59□□□□□ -0.23
SPATA13-213ENST00000439928 SMC2O95347 1197 aa13.58□□□□□ -0.24
SPATA13-213ENST00000439928 MYL1P05976 194 aa13.58□□□□□ -0.24
SPATA13-213ENST00000439928 XRCC6P12956 609 aaKnown RBP eCLIP13.58□□□□□ -0.24
SPATA13-213ENST00000439928 HSPA6P17066 643 aa13.58□□□□□ -0.24
SPATA13-213ENST00000439928 MUTP22033 750 aa13.58□□□□□ -0.24
SPATA13-213ENST00000439928 SP2Q02086 613 aa13.58□□□□□ -0.24
SPATA13-213ENST00000439928 SP4Q02446 784 aa13.58□□□□□ -0.24
SPATA13-213ENST00000439928 LRSAM1Q6UWE0 723 aa13.58□□□□□ -0.24
SPATA13-213ENST00000439928 SV2BQ7L1I2 683 aa13.58□□□□□ -0.24
SPATA13-213ENST00000439928 GRAMD1CQ8IYS0 662 aa13.58□□□□□ -0.24
SPATA13-213ENST00000439928 DYDC2Q96IM9 177 aa13.58□□□□□ -0.24
SPATA13-213ENST00000439928 TRIM47Q96LD4 638 aa13.58□□□□□ -0.24
SPATA13-213ENST00000439928 HSD17B14Q9BPX1 270 aa13.58□□□□□ -0.24
SPATA13-213ENST00000439928 LXNQ9BS40 222 aa13.58□□□□□ -0.24
SPATA13-213ENST00000439928 BEGAINQ9BUH8 593 aa13.58□□□□□ -0.24
SPATA13-213ENST00000439928 LRRC27Q9C0I9 530 aa13.58□□□□□ -0.24
SPATA13-213ENST00000439928 MLXIPQ9HAP2 919 aa13.58□□□□□ -0.24
SPATA13-213ENST00000439928 SAGE1Q9NXZ1 904 aa13.58□□□□□ -0.24
SPATA13-213ENST00000439928 RGL1Q9NZL6 768 aa13.58□□□□□ -0.24
SPATA13-213ENST00000439928 DNM3Q9UQ16 869 aa13.58□□□□□ -0.24
SPATA13-213ENST00000439928 PCDHA10Q9Y5I2 948 aa13.58□□□□□ -0.24
SPATA13-213ENST00000439928 SORBS3O60504 671 aa13.57□□□□□ -0.24
SPATA13-213ENST00000439928 GGPS1O95749 300 aa13.57□□□□□ -0.24
SPATA13-213ENST00000439928 P4HBP07237 508 aaKnown RBP13.57□□□□□ -0.24
SPATA13-213ENST00000439928 SPATA31C1P0DKV0 1188 aa13.57□□□□□ -0.24
SPATA13-213ENST00000439928 TXNP10599 105 aaKnown RBP13.57□□□□□ -0.24
SPATA13-213ENST00000439928 CTTNQ14247 550 aaKnown RBP13.57□□□□□ -0.24
SPATA13-213ENST00000439928 DHX8Q14562 1220 aaKnown RBP13.57□□□□□ -0.24
SPATA13-213ENST00000439928 ECM1Q16610 540 aa13.57□□□□□ -0.24
SPATA13-213ENST00000439928 LY6KQ17RY6 165 aa13.57□□□□□ -0.24
SPATA13-213ENST00000439928 METTL7BQ6UX53 244 aa13.57□□□□□ -0.24
SPATA13-213ENST00000439928 BANK1Q8NDB2 785 aa13.57□□□□□ -0.24
SPATA13-213ENST00000439928 ANP32BQ92688 251 aaKnown RBP13.57□□□□□ -0.24
SPATA13-213ENST00000439928 RAD54LQ92698 747 aa13.57□□□□□ -0.24
SPATA13-213ENST00000439928 USP6NLQ92738 828 aa13.57□□□□□ -0.24
SPATA13-213ENST00000439928 STAMQ92783 540 aa13.57□□□□□ -0.24
SPATA13-213ENST00000439928 ERCC4Q92889 916 aaPredicted RBP13.57□□□□□ -0.24
SPATA13-213ENST00000439928 SMARCE1Q969G3 411 aa13.57□□□□□ -0.24
SPATA13-213ENST00000439928 ARHGAP39Q9C0H5 1083 aa13.57□□□□□ -0.24
SPATA13-213ENST00000439928 KBTBD4Q9NVX7 518 aa13.57□□□□□ -0.24
SPATA13-213ENST00000439928 DDX41Q9UJV9 622 aaKnown RBP13.57□□□□□ -0.24
SPATA13-213ENST00000439928 GJD2Q9UKL4 321 aa13.57□□□□□ -0.24
SPATA13-213ENST00000439928 ZHX1Q9UKY1 873 aaPredicted RBP13.57□□□□□ -0.24
SPATA13-213ENST00000439928 NOP56O00567 594 aaKnown RBP13.56□□□□□ -0.24
SPATA13-213ENST00000439928 FOXN1O15353 648 aa13.56□□□□□ -0.24
SPATA13-213ENST00000439928 DKC1O60832 514 aaKnown RBP eCLIP13.56□□□□□ -0.24
SPATA13-213ENST00000439928 FARP2O94887 1054 aaPredicted RBP13.56□□□□□ -0.24
SPATA13-213ENST00000439928 SLITRK3O94933 977 aa13.56□□□□□ -0.24
SPATA13-213ENST00000439928 CCNE2O96020 404 aa13.56□□□□□ -0.24
SPATA13-213ENST00000439928 SSBP05455 408 aaKnown RBP eCLIP13.56□□□□□ -0.24
SPATA13-213ENST00000439928 PSAPP07602 524 aa13.56□□□□□ -0.24
SPATA13-213ENST00000439928 CTGFP29279 349 aa13.56□□□□□ -0.24
SPATA13-213ENST00000439928 QARSP47897 775 aaKnown RBP13.56□□□□□ -0.24
SPATA13-213ENST00000439928 ACTR2P61160 394 aa13.56□□□□□ -0.24
SPATA13-213ENST00000439928 MAP2K1Q02750 393 aaPredicted RBP13.56□□□□□ -0.24
SPATA13-213ENST00000439928 OLFML2BQ68BL8 750 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms