RNA–Protein interactions for RNA: ENST00000439106.5

PRAME-209, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 891 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-209ENST00000439106 MBTPS1Q14703 1052 aa15.82■□□□□ 0.12
PRAME-209ENST00000439106 TRAF7Q6Q0C0 670 aa15.82■□□□□ 0.12
PRAME-209ENST00000439106 TMCO2Q7Z6W1 182 aaPredicted RBP15.82■□□□□ 0.12
PRAME-209ENST00000439106 FBXL16Q8N461 479 aa15.82■□□□□ 0.12
PRAME-209ENST00000439106 MXRA8Q9BRK3 442 aa15.82■□□□□ 0.12
PRAME-209ENST00000439106 KCNH7Q9NS40 1196 aa15.82■□□□□ 0.12
PRAME-209ENST00000439106 SETD4Q9NVD3 440 aa15.82■□□□□ 0.12
PRAME-209ENST00000439106 NLRC5Q86WI3 1866 aa15.82■□□□□ 0.12
PRAME-209ENST00000439106 TMEM265A0A087WTH1 108 aa15.81■□□□□ 0.12
PRAME-209ENST00000439106 EPB41L2O43491 1005 aaKnown RBP15.81■□□□□ 0.12
PRAME-209ENST00000439106 CTSHP09668 335 aa15.81■□□□□ 0.12
PRAME-209ENST00000439106 ACTN1P12814 892 aa15.81■□□□□ 0.12
PRAME-209ENST00000439106 FOSL2P15408 326 aa15.81■□□□□ 0.12
PRAME-209ENST00000439106 ATP2A2P16615 1042 aaKnown RBP15.81■□□□□ 0.12
PRAME-209ENST00000439106 HOXC8P31273 242 aa15.81■□□□□ 0.12
PRAME-209ENST00000439106 THPOP40225 353 aa15.81■□□□□ 0.12
PRAME-209ENST00000439106 RBL2Q08999 1139 aa15.81■□□□□ 0.12
PRAME-209ENST00000439106 ITGB3BPQ13352 177 aaPredicted RBP15.81■□□□□ 0.12
PRAME-209ENST00000439106 AP3B2Q13367 1082 aa15.81■□□□□ 0.12
PRAME-209ENST00000439106 ERICH6BQ5W0A0 696 aa15.81■□□□□ 0.12
PRAME-209ENST00000439106 SERINC5Q86VE9 423 aa15.81■□□□□ 0.12
PRAME-209ENST00000439106 SLC17A8Q8NDX2 589 aa15.81■□□□□ 0.12
PRAME-209ENST00000439106 CDHR1Q96JP9 859 aa15.81■□□□□ 0.12
PRAME-209ENST00000439106 OSBPL7Q9BZF2 842 aa15.81■□□□□ 0.12
PRAME-209ENST00000439106 PRDM12Q9H4Q4 367 aa15.81■□□□□ 0.12
PRAME-209ENST00000439106 VPS54Q9P1Q0 977 aa15.81■□□□□ 0.12
PRAME-209ENST00000439106 MSRAQ9UJ68 235 aa15.81■□□□□ 0.12
PRAME-209ENST00000439106 PRRC2BQ5JSZ5 2229 aaKnown RBP15.8■□□□□ 0.12
PRAME-209ENST00000439106 DDX39AO00148 427 aaKnown RBP15.8■□□□□ 0.12
PRAME-209ENST00000439106 FOSP01100 380 aaPredicted RBP15.8■□□□□ 0.12
PRAME-209ENST00000439106 SREBF1P36956 1147 aa15.8■□□□□ 0.12
PRAME-209ENST00000439106 EVCP57679 992 aa15.8■□□□□ 0.12
PRAME-209ENST00000439106 ARHGAP4P98171 946 aa15.8■□□□□ 0.12
PRAME-209ENST00000439106 RAB30Q15771 203 aa15.8■□□□□ 0.12
PRAME-209ENST00000439106 GIMAP8Q8ND71 665 aaPredicted RBP15.8■□□□□ 0.12
PRAME-209ENST00000439106 LMBR1Q8WVP7 490 aa15.8■□□□□ 0.12
PRAME-209ENST00000439106 SEPT1Q8WYJ6 367 aa15.8■□□□□ 0.12
PRAME-209ENST00000439106 RNF26Q9BY78 433 aaPredicted RBP15.8■□□□□ 0.12
PRAME-209ENST00000439106 ZMYND12Q9H0C1 365 aa15.8■□□□□ 0.12
PRAME-209ENST00000439106 JPH1Q9HDC5 661 aaPredicted RBP15.8■□□□□ 0.12
PRAME-209ENST00000439106 SLC9A2Q9UBY0 812 aa15.8■□□□□ 0.12
PRAME-209ENST00000439106 ZNF215Q9UL58 517 aaPredicted RBP15.8■□□□□ 0.12
PRAME-209ENST00000439106 ESYT2A0FGR8 921 aa15.79■□□□□ 0.12
PRAME-209ENST00000439106 FAM86B1E9PN63 330 aa15.79■□□□□ 0.12
PRAME-209ENST00000439106 ARHGEF15O94989 841 aa15.79■□□□□ 0.12
PRAME-209ENST00000439106 FAM86B2P0C5J1 330 aa15.79■□□□□ 0.12
PRAME-209ENST00000439106 IFNAR1P17181 557 aa15.79■□□□□ 0.12
PRAME-209ENST00000439106 ZNF76P36508 570 aa15.79■□□□□ 0.12
PRAME-209ENST00000439106 DEFB103AP81534 67 aa15.79■□□□□ 0.12
PRAME-209ENST00000439106 AKAP17AQ02040 695 aaKnown RBP15.79■□□□□ 0.12
PRAME-209ENST00000439106 CEP55Q53EZ4 464 aa15.79■□□□□ 0.12
PRAME-209ENST00000439106 MAFAQ8NHW3 353 aaPredicted RBP15.79■□□□□ 0.12
PRAME-209ENST00000439106 ZBTB10Q96DT7 871 aa15.79■□□□□ 0.12
PRAME-209ENST00000439106 PCYT2Q99447 389 aa15.79■□□□□ 0.12
PRAME-209ENST00000439106 C6orf50Q9HD87 102 aa15.79■□□□□ 0.12
PRAME-209ENST00000439106 PDRG1Q9NUG6 133 aa15.79■□□□□ 0.12
PRAME-209ENST00000439106 CUL9Q8IWT3 2517 aa15.78■□□□□ 0.12
PRAME-209ENST00000439106 CXCL10P02778 98 aa15.78■□□□□ 0.12
PRAME-209ENST00000439106 WDR5P61964 334 aaKnown RBP15.78■□□□□ 0.12
PRAME-209ENST00000439106 CNKSR3Q6P9H4 555 aa15.78■□□□□ 0.12
PRAME-209ENST00000439106 RUFY4Q6ZNE9 571 aa15.78■□□□□ 0.12
PRAME-209ENST00000439106 SPRED2Q7Z698 418 aa15.78■□□□□ 0.12
PRAME-209ENST00000439106 REXO1Q8N1G1 1221 aaKnown RBP15.78■□□□□ 0.12
PRAME-209ENST00000439106 GLG1Q92896 1179 aa15.78■□□□□ 0.12
PRAME-209ENST00000439106 AIFM3Q96NN9 605 aa15.78■□□□□ 0.12
PRAME-209ENST00000439106 TM6SF1Q9BZW5 370 aa15.78■□□□□ 0.12
PRAME-209ENST00000439106 SLC28A3Q9HAS3 691 aa15.78■□□□□ 0.12
PRAME-209ENST00000439106 AGO4Q9HCK5 861 aaKnown RBP15.78■□□□□ 0.12
PRAME-209ENST00000439106 EMSYQ7Z589 1322 aa15.77■□□□□ 0.12
PRAME-209ENST00000439106 IGLV3-22A0A075B6J6 115 aa15.77■□□□□ 0.12
PRAME-209ENST00000439106 RSPH10B2B2RC85 870 aa15.77■□□□□ 0.12
PRAME-209ENST00000439106 MEIS1O00470 390 aa15.77■□□□□ 0.12
PRAME-209ENST00000439106 MAFGO15525 162 aa15.77■□□□□ 0.12
PRAME-209ENST00000439106 CA3P07451 260 aa15.77■□□□□ 0.12
PRAME-209ENST00000439106 RSPH10BP0C881 870 aa15.77■□□□□ 0.12
PRAME-209ENST00000439106 ACTR2P61160 394 aa15.77■□□□□ 0.12
PRAME-209ENST00000439106 IGBP1P78318 339 aa15.77■□□□□ 0.12
PRAME-209ENST00000439106 ADAM17P78536 824 aa15.77■□□□□ 0.12
PRAME-209ENST00000439106 PPFIA1Q13136 1202 aa15.77■□□□□ 0.12
PRAME-209ENST00000439106 PPP2R2DQ66LE6 453 aa15.77■□□□□ 0.12
PRAME-209ENST00000439106 PLA2G4DQ86XP0 818 aa15.77■□□□□ 0.12
PRAME-209ENST00000439106 CCDC12Q8WUD4 166 aaPredicted RBP15.77■□□□□ 0.12
PRAME-209ENST00000439106 CRYGNQ8WXF5 182 aa15.77■□□□□ 0.12
PRAME-209ENST00000439106 SLC9A7Q96T83 725 aa15.77■□□□□ 0.12
PRAME-209ENST00000439106 SDF4Q9BRK5 362 aa15.77■□□□□ 0.12
PRAME-209ENST00000439106 GLT8D2Q9H1C3 349 aa15.77■□□□□ 0.12
PRAME-209ENST00000439106 CERS4Q9HA82 394 aa15.77■□□□□ 0.12
PRAME-209ENST00000439106 PCDHA11Q9Y5I1 949 aa15.77■□□□□ 0.12
PRAME-209ENST00000439106 TRANK1O15050 2925 aa15.76■□□□□ 0.11
PRAME-209ENST00000439106 NFASCO94856 1347 aa15.76■□□□□ 0.11
PRAME-209ENST00000439106 REV3LO60673 3130 aa15.76■□□□□ 0.11
PRAME-209ENST00000439106 CPLX1O14810 134 aa15.76■□□□□ 0.11
PRAME-209ENST00000439106 BAIAP3O94812 1187 aa15.76■□□□□ 0.11
PRAME-209ENST00000439106 SEC24BO95487 1268 aa15.76■□□□□ 0.11
PRAME-209ENST00000439106 CCNE2O96020 404 aa15.76■□□□□ 0.11
PRAME-209ENST00000439106 KCNJ6P48051 423 aa15.76■□□□□ 0.11
PRAME-209ENST00000439106 SSRP1Q08945 709 aaKnown RBP15.76■□□□□ 0.11
PRAME-209ENST00000439106 GRIK4Q16099 956 aa15.76■□□□□ 0.11
PRAME-209ENST00000439106 FAM117BQ6P1L5 589 aa15.76■□□□□ 0.11
PRAME-209ENST00000439106 HERC6Q8IVU3 1022 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms