RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 MAP1BP46821 2468 aaKnown RBP11.43□□□□□ -0.58
SMPD4-208ENST00000439029 KIAA1671Q9BY89 1806 aa11.42□□□□□ -0.58
SMPD4-208ENST00000439029 TTC3P53804 2025 aa11.42□□□□□ -0.58
SMPD4-208ENST00000439029 C2CD4DB7Z1M9 353 aa11.42□□□□□ -0.58
SMPD4-208ENST00000439029 H3BRB1 525 aa11.42□□□□□ -0.58
SMPD4-208ENST00000439029 PUM1Q14671 1186 aaKnown RBP eCLIP11.42□□□□□ -0.58
SMPD4-208ENST00000439029 PPP4R3BQ5MIZ7 849 aa11.42□□□□□ -0.58
SMPD4-208ENST00000439029 SIRT2Q8IXJ6 389 aa11.42□□□□□ -0.58
SMPD4-208ENST00000439029 KBTBD3Q8NAB2 608 aa11.42□□□□□ -0.58
SMPD4-208ENST00000439029 PANK1Q8TE04 598 aa11.42□□□□□ -0.58
SMPD4-208ENST00000439029 ATP8B4Q8TF62 1192 aa11.42□□□□□ -0.58
SMPD4-208ENST00000439029 GPKOWQ92917 476 aaPredicted RBP eCLIP11.42□□□□□ -0.58
SMPD4-208ENST00000439029 P2RX5Q93086 422 aa11.42□□□□□ -0.58
SMPD4-208ENST00000439029 UBA5Q9GZZ9 404 aa11.42□□□□□ -0.58
SMPD4-208ENST00000439029 S1PR5Q9H228 398 aa11.42□□□□□ -0.58
SMPD4-208ENST00000439029 TUT1Q9H6E5 874 aaKnown RBP11.42□□□□□ -0.58
SMPD4-208ENST00000439029 TOMM22Q9NS69 142 aa11.42□□□□□ -0.58
SMPD4-208ENST00000439029 SORCS3Q9UPU3 1222 aa11.42□□□□□ -0.58
SMPD4-208ENST00000439029 R4GN57 208 aa11.42□□□□□ -0.58
SMPD4-208ENST00000439029 DNAH14Q0VDD8 3507 aa11.42□□□□□ -0.58
SMPD4-208ENST00000439029 BAHCC1Q9P281 2608 aa11.41□□□□□ -0.58
SMPD4-208ENST00000439029 WDR19Q8NEZ3 1342 aa11.41□□□□□ -0.58
SMPD4-208ENST00000439029 ZNF292O60281 2723 aa11.41□□□□□ -0.58
SMPD4-208ENST00000439029 EIF3JO75822 258 aaKnown RBP11.41□□□□□ -0.58
SMPD4-208ENST00000439029 LGALS2P05162 132 aa11.41□□□□□ -0.58
SMPD4-208ENST00000439029 NR3C2P08235 984 aa11.41□□□□□ -0.58
SMPD4-208ENST00000439029 PDHBP11177 359 aa11.41□□□□□ -0.58
SMPD4-208ENST00000439029 TOP1P11387 765 aaKnown RBP11.41□□□□□ -0.58
SMPD4-208ENST00000439029 HOXD8P13378 290 aaPredicted RBP11.41□□□□□ -0.58
SMPD4-208ENST00000439029 ERVFC1P60507 584 aa11.41□□□□□ -0.58
SMPD4-208ENST00000439029 ARHGAP4P98171 946 aa11.41□□□□□ -0.58
SMPD4-208ENST00000439029 SP2Q02086 613 aa11.41□□□□□ -0.58
SMPD4-208ENST00000439029 LPIN1Q14693 890 aa11.41□□□□□ -0.58
SMPD4-208ENST00000439029 ANGPT1Q15389 498 aa11.41□□□□□ -0.58
SMPD4-208ENST00000439029 RRP12Q5JTH9 1297 aaKnown RBP11.41□□□□□ -0.58
SMPD4-208ENST00000439029 CELF3Q5SZQ8 465 aaKnown RBP11.41□□□□□ -0.58
SMPD4-208ENST00000439029 CWF19L1Q69YN2 538 aaKnown RBP11.41□□□□□ -0.58
SMPD4-208ENST00000439029 ANKRD54Q6NXT1 300 aa11.41□□□□□ -0.58
SMPD4-208ENST00000439029 SYCE2Q6PIF2 218 aa11.41□□□□□ -0.58
SMPD4-208ENST00000439029 UBALD2Q8IYN6 164 aa11.41□□□□□ -0.58
SMPD4-208ENST00000439029 DCLK2Q8N568 766 aa11.41□□□□□ -0.58
SMPD4-208ENST00000439029 LINC01599Q8WXQ3 324 aa11.41□□□□□ -0.58
SMPD4-208ENST00000439029 IWS1Q96ST2 819 aa11.41□□□□□ -0.58
SMPD4-208ENST00000439029 PLXNA4Q9HCM2 1894 aa11.4□□□□□ -0.58
SMPD4-208ENST00000439029 RAB11FIP3O75154 756 aa11.4□□□□□ -0.58
SMPD4-208ENST00000439029 WEE2P0C1S8 567 aa11.4□□□□□ -0.58
SMPD4-208ENST00000439029 HOXC8P31273 242 aa11.4□□□□□ -0.58
SMPD4-208ENST00000439029 ZNF543Q08ER8 600 aa11.4□□□□□ -0.58
SMPD4-208ENST00000439029 APOBRQ0VD83 1088 aa11.4□□□□□ -0.58
SMPD4-208ENST00000439029 DUSP6Q16828 381 aa11.4□□□□□ -0.58
SMPD4-208ENST00000439029 FAM26DQ5JW98 314 aa11.4□□□□□ -0.58
SMPD4-208ENST00000439029 RUFY4Q6ZNE9 571 aa11.4□□□□□ -0.58
SMPD4-208ENST00000439029 TRIM50Q86XT4 487 aa11.4□□□□□ -0.58
SMPD4-208ENST00000439029 RGS22Q8NE09 1264 aa11.4□□□□□ -0.58
SMPD4-208ENST00000439029 MLXIPQ9HAP2 919 aa11.4□□□□□ -0.58
SMPD4-208ENST00000439029 PXMP2Q9NR77 195 aa11.4□□□□□ -0.58
SMPD4-208ENST00000439029 TELO2Q9Y4R8 837 aa11.4□□□□□ -0.58
SMPD4-208ENST00000439029 WDR87Q6ZQQ6 2873 aa11.4□□□□□ -0.58
SMPD4-208ENST00000439029 CAND2O75155 1236 aa11.39□□□□□ -0.59
SMPD4-208ENST00000439029 LMNAP02545 664 aaKnown RBP11.39□□□□□ -0.59
SMPD4-208ENST00000439029 UBA1P22314 1058 aaKnown RBP11.39□□□□□ -0.59
SMPD4-208ENST00000439029 NOVP48745 357 aa11.39□□□□□ -0.59
SMPD4-208ENST00000439029 CLCN5P51795 746 aa11.39□□□□□ -0.59
SMPD4-208ENST00000439029 CDC37Q16543 378 aaPredicted RBP11.39□□□□□ -0.59
SMPD4-208ENST00000439029 RSPO4Q2I0M5 234 aaPredicted RBP11.39□□□□□ -0.59
SMPD4-208ENST00000439029 OTOGLQ3ZCN5 2332 aa11.39□□□□□ -0.59
SMPD4-208ENST00000439029 NAALADL2Q58DX5 795 aa11.39□□□□□ -0.59
SMPD4-208ENST00000439029 SPOUT1Q5T280 376 aaKnown RBP11.39□□□□□ -0.59
SMPD4-208ENST00000439029 UTP14CQ5TAP6 766 aaKnown RBP11.39□□□□□ -0.59
SMPD4-208ENST00000439029 PLPP4Q5VZY2 271 aa11.39□□□□□ -0.59
SMPD4-208ENST00000439029 RTN4RL1Q86UN2 441 aaPredicted RBP11.39□□□□□ -0.59
SMPD4-208ENST00000439029 CMTR2Q8IYT2 770 aaKnown RBP11.39□□□□□ -0.59
SMPD4-208ENST00000439029 CYP2W1Q8TAV3 490 aa11.39□□□□□ -0.59
SMPD4-208ENST00000439029 LMBR1Q8WVP7 490 aa11.39□□□□□ -0.59
SMPD4-208ENST00000439029 RIN2Q8WYP3 895 aaPredicted RBP11.39□□□□□ -0.59
SMPD4-208ENST00000439029 POMKQ9H5K3 350 aa11.39□□□□□ -0.59
SMPD4-208ENST00000439029 HCSTQ9UBK5 93 aa11.39□□□□□ -0.59
SMPD4-208ENST00000439029 LIMD1Q9UGP4 676 aa11.39□□□□□ -0.59
SMPD4-208ENST00000439029 PNMA2Q9UL42 364 aa11.39□□□□□ -0.59
SMPD4-208ENST00000439029 NR2E1Q9Y466 385 aa11.39□□□□□ -0.59
SMPD4-208ENST00000439029 DMXL1Q9Y485 3027 aa11.39□□□□□ -0.59
SMPD4-208ENST00000439029 GPR179Q6PRD1 2367 aa11.38□□□□□ -0.59
SMPD4-208ENST00000439029 HMMRO75330 724 aa11.38□□□□□ -0.59
SMPD4-208ENST00000439029 CFBP00751 764 aa11.38□□□□□ -0.59
SMPD4-208ENST00000439029 NPR3P17342 541 aa11.38□□□□□ -0.59
SMPD4-208ENST00000439029 CD52P31358 61 aa11.38□□□□□ -0.59
SMPD4-208ENST00000439029 SP4Q02446 784 aa11.38□□□□□ -0.59
SMPD4-208ENST00000439029 ST3GAL2Q16842 350 aa11.38□□□□□ -0.59
SMPD4-208ENST00000439029 CCDC105Q8IYK2 499 aa11.38□□□□□ -0.59
SMPD4-208ENST00000439029 DTWD2Q8NBA8 298 aa11.38□□□□□ -0.59
SMPD4-208ENST00000439029 IL31RAQ8NI17 732 aa11.38□□□□□ -0.59
SMPD4-208ENST00000439029 EHMT1Q9H9B1 1298 aa11.38□□□□□ -0.59
SMPD4-208ENST00000439029 AGO3Q9H9G7 860 aaKnown RBP11.38□□□□□ -0.59
SMPD4-208ENST00000439029 ECHDC1Q9NTX5 307 aa11.38□□□□□ -0.59
SMPD4-208ENST00000439029 CHD8Q9HCK8 2581 aa11.38□□□□□ -0.59
SMPD4-208ENST00000439029 ABCB11O95342 1321 aa11.37□□□□□ -0.59
SMPD4-208ENST00000439029 NOP56O00567 594 aaKnown RBP11.37□□□□□ -0.59
SMPD4-208ENST00000439029 FOXP2O15409 715 aa11.37□□□□□ -0.59
SMPD4-208ENST00000439029 ZFYP08048 801 aaPredicted RBP11.37□□□□□ -0.59
SMPD4-208ENST00000439029 GNAT1P11488 350 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms