RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P12-201ENST00000438745 C9orf118A6NHY6 69 aa5.04□□□□□ -1.6
HMGB3P12-201ENST00000438745 ACOT7O00154 380 aa5.04□□□□□ -1.6
HMGB3P12-201ENST00000438745 LTFP02788 710 aa5.04□□□□□ -1.6
HMGB3P12-201ENST00000438745 COL6A1P12109 1028 aa5.04□□□□□ -1.6
HMGB3P12-201ENST00000438745 LACTBP83111 547 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P12-201ENST00000438745 GRIN1Q05586 938 aa5.04□□□□□ -1.6
HMGB3P12-201ENST00000438745 KIAA2012Q0VF49 1180 aa5.04□□□□□ -1.6
HMGB3P12-201ENST00000438745 SKOR2Q2VWA4 1001 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P12-201ENST00000438745 RGL3Q3MIN7 710 aa5.04□□□□□ -1.6
HMGB3P12-201ENST00000438745 KCTD1Q719H9 257 aa5.04□□□□□ -1.6
HMGB3P12-201ENST00000438745 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P12-201ENST00000438745 LILRB2Q8N423 598 aa5.04□□□□□ -1.6
HMGB3P12-201ENST00000438745 DTX3Q8N9I9 347 aa5.04□□□□□ -1.6
HMGB3P12-201ENST00000438745 THAP3Q8WTV1 239 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P12-201ENST00000438745 YTHDC1Q96MU7 727 aaKnown RBP5.04□□□□□ -1.6
HMGB3P12-201ENST00000438745 DNAJC2Q99543 621 aaKnown RBP5.04□□□□□ -1.6
HMGB3P12-201ENST00000438745 RBPJLQ9UBG7 517 aa5.04□□□□□ -1.6
HMGB3P12-201ENST00000438745 CNOT11Q9UKZ1 510 aaKnown RBP5.04□□□□□ -1.6
HMGB3P12-201ENST00000438745 MROH6A6NGR9 719 aa5.03□□□□□ -1.6
HMGB3P12-201ENST00000438745 EFCAB14O75071 495 aa5.03□□□□□ -1.6
HMGB3P12-201ENST00000438745 CYP7B1O75881 506 aa5.03□□□□□ -1.6
HMGB3P12-201ENST00000438745 AMY2AP04746 511 aa5.03□□□□□ -1.6
HMGB3P12-201ENST00000438745 ENO2P09104 434 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P12-201ENST00000438745 AMY2BP19961 511 aa5.03□□□□□ -1.6
HMGB3P12-201ENST00000438745 GJA9P57773 515 aa5.03□□□□□ -1.6
HMGB3P12-201ENST00000438745 GPR19Q15760 415 aa5.03□□□□□ -1.6
HMGB3P12-201ENST00000438745 MCTP2Q6DN12 878 aa5.03□□□□□ -1.6
HMGB3P12-201ENST00000438745 FERMT3Q86UX7 667 aa5.03□□□□□ -1.6
HMGB3P12-201ENST00000438745 NLGN4XQ8N0W4 816 aa5.03□□□□□ -1.6
HMGB3P12-201ENST00000438745 PMFBP1Q8TBY8 1022 aa5.03□□□□□ -1.6
HMGB3P12-201ENST00000438745 FBXW5Q969U6 566 aa5.03□□□□□ -1.6
HMGB3P12-201ENST00000438745 MBD6Q96DN6 1003 aa5.03□□□□□ -1.6
HMGB3P12-201ENST00000438745 CLIC6Q96NY7 704 aa5.03□□□□□ -1.6
HMGB3P12-201ENST00000438745 WRNIP1Q96S55 665 aa5.03□□□□□ -1.6
HMGB3P12-201ENST00000438745 RBM15Q96T37 977 aaKnown RBP eCLIP5.03□□□□□ -1.6
HMGB3P12-201ENST00000438745 DLL4Q9NR61 685 aa5.03□□□□□ -1.6
HMGB3P12-201ENST00000438745 USP40Q9NVE5 1235 aa5.03□□□□□ -1.6
HMGB3P12-201ENST00000438745 PCDHA9Q9Y5H5 950 aa5.03□□□□□ -1.6
HMGB3P12-201ENST00000438745 LMTK3Q96Q04 1460 aa5.02□□□□□ -1.61
HMGB3P12-201ENST00000438745 RIMBP3CA6NJZ7 1639 aa5.02□□□□□ -1.61
HMGB3P12-201ENST00000438745 RIMBP3BA6NNM3 1639 aa5.02□□□□□ -1.61
HMGB3P12-201ENST00000438745 RIMBP3Q9UFD9 1639 aa5.02□□□□□ -1.61
HMGB3P12-201ENST00000438745 CRTAMO95727 393 aa5.02□□□□□ -1.61
HMGB3P12-201ENST00000438745 CHGBP05060 677 aa5.02□□□□□ -1.61
HMGB3P12-201ENST00000438745 CKMP06732 381 aa5.02□□□□□ -1.61
HMGB3P12-201ENST00000438745 KCNA6P17658 529 aa5.02□□□□□ -1.61
HMGB3P12-201ENST00000438745 GUCY1A3Q02108 690 aa5.02□□□□□ -1.61
HMGB3P12-201ENST00000438745 ARHGAP36Q6ZRI8 547 aa5.02□□□□□ -1.61
HMGB3P12-201ENST00000438745 MTDHQ86UE4 582 aaKnown RBP5.02□□□□□ -1.61
HMGB3P12-201ENST00000438745 OSTM1Q86WC4 334 aa5.02□□□□□ -1.61
HMGB3P12-201ENST00000438745 ZSWIM2Q8NEG5 633 aa5.02□□□□□ -1.61
HMGB3P12-201ENST00000438745 SLC7A14Q8TBB6 771 aa5.02□□□□□ -1.61
HMGB3P12-201ENST00000438745 ZCCHC14Q8WYQ9 949 aaKnown RBP5.02□□□□□ -1.61
HMGB3P12-201ENST00000438745 DDX1Q92499 740 aaKnown RBP5.02□□□□□ -1.61
HMGB3P12-201ENST00000438745 SCLYQ96I15 445 aa5.02□□□□□ -1.61
HMGB3P12-201ENST00000438745 LCORQ96JN0 433 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P12-201ENST00000438745 OSBPL2Q9H1P3 480 aa5.02□□□□□ -1.61
HMGB3P12-201ENST00000438745 SLC52A2Q9HAB3 445 aa5.02□□□□□ -1.61
HMGB3P12-201ENST00000438745 CBLCQ9ULV8 474 aa5.02□□□□□ -1.61
HMGB3P12-201ENST00000438745 SRPK3Q9UPE1 567 aa5.02□□□□□ -1.61
HMGB3P12-201ENST00000438745 CDK11AQ9UQ88 783 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P12-201ENST00000438745 BAZ1AQ9NRL2 1556 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P12-201ENST00000438745 FAM90A27PA6NNH2 459 aa5.01□□□□□ -1.61
HMGB3P12-201ENST00000438745 ZNF561-AS1K7EIQ3 104 aa5.01□□□□□ -1.61
HMGB3P12-201ENST00000438745 MAN2B1O00754 1011 aa5.01□□□□□ -1.61
HMGB3P12-201ENST00000438745 GSTA4O15217 222 aa5.01□□□□□ -1.61
HMGB3P12-201ENST00000438745 CELA3BP08861 270 aa5.01□□□□□ -1.61
HMGB3P12-201ENST00000438745 PYGMP11217 842 aa5.01□□□□□ -1.61
HMGB3P12-201ENST00000438745 PDE6AP16499 860 aa5.01□□□□□ -1.61
HMGB3P12-201ENST00000438745 KRTAP10-2P60368 255 aa5.01□□□□□ -1.61
HMGB3P12-201ENST00000438745 PFKPQ01813 784 aa5.01□□□□□ -1.61
HMGB3P12-201ENST00000438745 C2orf27AQ580R0 203 aa5.01□□□□□ -1.61
HMGB3P12-201ENST00000438745 UBXN11Q5T124 520 aa5.01□□□□□ -1.61
HMGB3P12-201ENST00000438745 CD276Q5ZPR3 534 aa5.01□□□□□ -1.61
HMGB3P12-201ENST00000438745 PKN3Q6P5Z2 889 aa5.01□□□□□ -1.61
HMGB3P12-201ENST00000438745 TMC5Q6UXY8 1006 aa5.01□□□□□ -1.61
HMGB3P12-201ENST00000438745 ZSWIM3Q96MP5 696 aa5.01□□□□□ -1.61
HMGB3P12-201ENST00000438745 SSBP3Q9BWW4 388 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P12-201ENST00000438745 MRPL4Q9BYD3 311 aaKnown RBP5.01□□□□□ -1.61
HMGB3P12-201ENST00000438745 JAG2Q9Y219 1238 aa5.01□□□□□ -1.61
HMGB3P12-201ENST00000438745 SCRIBQ14160 1630 aa5.01□□□□□ -1.61
HMGB3P12-201ENST00000438745 SMARCA2P51531 1590 aa5□□□□□ -1.61
HMGB3P12-201ENST00000438745 THOC2Q8NI27 1593 aaKnown RBP5□□□□□ -1.61
HMGB3P12-201ENST00000438745 ZNF839A8K0R7 811 aa5□□□□□ -1.61
HMGB3P12-201ENST00000438745 KLHL18O94889 574 aa5□□□□□ -1.61
HMGB3P12-201ENST00000438745 IL18BPO95998 194 aa5□□□□□ -1.61
HMGB3P12-201ENST00000438745 KNG1P01042 644 aa5□□□□□ -1.61
HMGB3P12-201ENST00000438745 ITGB3P05106 788 aa5□□□□□ -1.61
HMGB3P12-201ENST00000438745 CNR2P34972 360 aa5□□□□□ -1.61
HMGB3P12-201ENST00000438745 JAM2P57087 298 aa5□□□□□ -1.61
HMGB3P12-201ENST00000438745 DBPQ10586 325 aaPredicted RBP5□□□□□ -1.61
HMGB3P12-201ENST00000438745 EFEMP1Q12805 493 aa5□□□□□ -1.61
HMGB3P12-201ENST00000438745 PRAMEF18Q5VWM3 479 aa5□□□□□ -1.61
HMGB3P12-201ENST00000438745 VASNQ6EMK4 673 aa5□□□□□ -1.61
HMGB3P12-201ENST00000438745 LGI4Q8N135 537 aa5□□□□□ -1.61
HMGB3P12-201ENST00000438745 UBXN4Q92575 508 aa5□□□□□ -1.61
HMGB3P12-201ENST00000438745 CD244Q9BZW8 370 aa5□□□□□ -1.61
HMGB3P12-201ENST00000438745 SMURF1Q9HCE7 757 aa5□□□□□ -1.61
HMGB3P12-201ENST00000438745 KCND1Q9NSA2 647 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms