RNA–Protein interactions for RNA: ENST00000438254.1

CUBN-204, Transcript of cubilin, humanhuman

TSL 3

Gene CUBN, Length 599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-204ENST00000438254 NLRX1Q86UT6 975 aa10.93□□□□□ -0.66
CUBN-204ENST00000438254 ELOA2Q8IYF1 753 aaPredicted RBP10.93□□□□□ -0.66
CUBN-204ENST00000438254 MSL3Q8N5Y2 521 aaKnown RBP10.93□□□□□ -0.66
CUBN-204ENST00000438254 LRRC15Q8TF66 581 aa10.93□□□□□ -0.66
CUBN-204ENST00000438254 TIGD1Q96MW7 591 aa10.93□□□□□ -0.66
CUBN-204ENST00000438254 NUDT12Q9BQG2 462 aa10.93□□□□□ -0.66
CUBN-204ENST00000438254 ZNF577Q9BSK1 485 aa10.93□□□□□ -0.66
CUBN-204ENST00000438254 ARHGAP39Q9C0H5 1083 aa10.93□□□□□ -0.66
CUBN-204ENST00000438254 RYDENQ9NUL5 291 aaKnown RBP10.93□□□□□ -0.66
CUBN-204ENST00000438254 SAGE1Q9NXZ1 904 aa10.93□□□□□ -0.66
CUBN-204ENST00000438254 DACT1Q9NYF0 836 aa10.93□□□□□ -0.66
CUBN-204ENST00000438254 KCNH3Q9ULD8 1083 aa10.93□□□□□ -0.66
CUBN-204ENST00000438254 NFASCO94856 1347 aa10.92□□□□□ -0.66
CUBN-204ENST00000438254 SYNGAP1Q96PV0 1343 aa10.92□□□□□ -0.66
CUBN-204ENST00000438254 RBM47A0AV96 593 aaKnown RBP10.92□□□□□ -0.66
CUBN-204ENST00000438254 B4DLN1 442 aa10.92□□□□□ -0.66
CUBN-204ENST00000438254 EML1O00423 815 aa10.92□□□□□ -0.66
CUBN-204ENST00000438254 SLC26A4O43511 780 aa10.92□□□□□ -0.66
CUBN-204ENST00000438254 ACTN4O43707 911 aaKnown RBP10.92□□□□□ -0.66
CUBN-204ENST00000438254 ZNF202O95125 648 aa10.92□□□□□ -0.66
CUBN-204ENST00000438254 SNAI1O95863 264 aaPredicted RBP10.92□□□□□ -0.66
CUBN-204ENST00000438254 SYKP43405 635 aa10.92□□□□□ -0.66
CUBN-204ENST00000438254 SP2Q02086 613 aa10.92□□□□□ -0.66
CUBN-204ENST00000438254 PDE4DQ08499 809 aa10.92□□□□□ -0.66
CUBN-204ENST00000438254 IRF5Q13568 498 aa10.92□□□□□ -0.66
CUBN-204ENST00000438254 TMEM266Q2M3C6 531 aa10.92□□□□□ -0.66
CUBN-204ENST00000438254 TMEM119Q4V9L6 283 aa10.92□□□□□ -0.66
CUBN-204ENST00000438254 TAPT1Q6NXT6 567 aa10.92□□□□□ -0.66
CUBN-204ENST00000438254 CCDC62Q6P9F0 684 aa10.92□□□□□ -0.66
CUBN-204ENST00000438254 THSD4Q6ZMP0 1018 aa10.92□□□□□ -0.66
CUBN-204ENST00000438254 CCDC73Q6ZRK6 1079 aa10.92□□□□□ -0.66
CUBN-204ENST00000438254 SH3RF1Q7Z6J0 888 aa10.92□□□□□ -0.66
CUBN-204ENST00000438254 SOCS4Q8WXH5 440 aa10.92□□□□□ -0.66
CUBN-204ENST00000438254 CDHR1Q96JP9 859 aa10.92□□□□□ -0.66
CUBN-204ENST00000438254 TRIM47Q96LD4 638 aa10.92□□□□□ -0.66
CUBN-204ENST00000438254 PNMA5Q96PV4 448 aa10.92□□□□□ -0.66
CUBN-204ENST00000438254 UIMC1Q96RL1 719 aa10.92□□□□□ -0.66
CUBN-204ENST00000438254 SENP7Q9BQF6 1050 aa10.92□□□□□ -0.66
CUBN-204ENST00000438254 DISC1Q9NRI5 854 aa10.92□□□□□ -0.66
CUBN-204ENST00000438254 TBC1D22BQ9NU19 505 aa10.92□□□□□ -0.66
CUBN-204ENST00000438254 DDX19AQ9NUU7 478 aaKnown RBP10.92□□□□□ -0.66
CUBN-204ENST00000438254 FAM13BQ9NYF5 915 aa10.92□□□□□ -0.66
CUBN-204ENST00000438254 LRWD1Q9UFC0 647 aa10.92□□□□□ -0.66
CUBN-204ENST00000438254 MCM3APO60318 1980 aa10.92□□□□□ -0.66
CUBN-204ENST00000438254 TNPO2O14787 897 aaKnown RBP10.91□□□□□ -0.66
CUBN-204ENST00000438254 GAS7O60861 476 aa10.91□□□□□ -0.66
CUBN-204ENST00000438254 TRPA1O75762 1119 aa10.91□□□□□ -0.66
CUBN-204ENST00000438254 ARIH2O95376 493 aa10.91□□□□□ -0.66
CUBN-204ENST00000438254 CCNE2O96020 404 aa10.91□□□□□ -0.66
CUBN-204ENST00000438254 SPATA31C1P0DKV0 1188 aa10.91□□□□□ -0.66
CUBN-204ENST00000438254 TGFB3P10600 412 aa10.91□□□□□ -0.66
CUBN-204ENST00000438254 XRCC5P13010 732 aaKnown RBP10.91□□□□□ -0.66
CUBN-204ENST00000438254 FCGRTP55899 365 aa10.91□□□□□ -0.66
CUBN-204ENST00000438254 SP3Q02447 781 aa10.91□□□□□ -0.66
CUBN-204ENST00000438254 GRB10Q13322 594 aa10.91□□□□□ -0.66
CUBN-204ENST00000438254 KARSQ15046 597 aaKnown RBP10.91□□□□□ -0.66
CUBN-204ENST00000438254 ECM1Q16610 540 aa10.91□□□□□ -0.66
CUBN-204ENST00000438254 GNPTABQ3T906 1256 aa10.91□□□□□ -0.66
CUBN-204ENST00000438254 LONRF3Q496Y0 759 aa10.91□□□□□ -0.66
CUBN-204ENST00000438254 OLFML2BQ68BL8 750 aa10.91□□□□□ -0.66
CUBN-204ENST00000438254 CAVIN1Q6NZI2 390 aaKnown RBP10.91□□□□□ -0.66
CUBN-204ENST00000438254 PDXDC2PQ6P474 469 aa10.91□□□□□ -0.66
CUBN-204ENST00000438254 DPP9Q86TI2 863 aa10.91□□□□□ -0.66
CUBN-204ENST00000438254 CABP7Q86V35 215 aa10.91□□□□□ -0.66
CUBN-204ENST00000438254 DNAJC5GQ8N7S2 189 aa10.91□□□□□ -0.66
CUBN-204ENST00000438254 MPHOSPH6Q99547 160 aaKnown RBP10.91□□□□□ -0.66
CUBN-204ENST00000438254 MTRQ99707 1265 aa10.91□□□□□ -0.66
CUBN-204ENST00000438254 HSD17B14Q9BPX1 270 aa10.91□□□□□ -0.66
CUBN-204ENST00000438254 TEKT3Q9BXF9 490 aa10.91□□□□□ -0.66
CUBN-204ENST00000438254 RAB34Q9BZG1 259 aa10.91□□□□□ -0.66
CUBN-204ENST00000438254 CRISPLD2Q9H0B8 497 aa10.91□□□□□ -0.66
CUBN-204ENST00000438254 UNC45AQ9H3U1 944 aa10.91□□□□□ -0.66
CUBN-204ENST00000438254 CLSTN2Q9H4D0 955 aa10.91□□□□□ -0.66
CUBN-204ENST00000438254 BCAS3Q9H6U6 928 aa10.91□□□□□ -0.66
CUBN-204ENST00000438254 VTA1Q9NP79 307 aa10.91□□□□□ -0.66
CUBN-204ENST00000438254 FLRT1Q9NZU1 646 aa10.91□□□□□ -0.66
CUBN-204ENST00000438254 GPR25O00155 361 aa10.9□□□□□ -0.66
CUBN-204ENST00000438254 POLR2DO15514 142 aaKnown RBP10.9□□□□□ -0.66
CUBN-204ENST00000438254 MED24O75448 989 aa10.9□□□□□ -0.66
CUBN-204ENST00000438254 UBA1P22314 1058 aaKnown RBP10.9□□□□□ -0.66
CUBN-204ENST00000438254 RPA1P27694 616 aa10.9□□□□□ -0.66
CUBN-204ENST00000438254 RGS2P41220 211 aa10.9□□□□□ -0.66
CUBN-204ENST00000438254 UBA7P41226 1012 aa10.9□□□□□ -0.66
CUBN-204ENST00000438254 PSMC4P43686 418 aa10.9□□□□□ -0.66
CUBN-204ENST00000438254 MDM2Q00987 491 aaPredicted RBP10.9□□□□□ -0.66
CUBN-204ENST00000438254 TPRNQ4KMQ1 711 aa10.9□□□□□ -0.66
CUBN-204ENST00000438254 CCDC183Q5T5S1 534 aa10.9□□□□□ -0.66
CUBN-204ENST00000438254 ZNF746Q6NUN9 644 aaPredicted RBP10.9□□□□□ -0.66
CUBN-204ENST00000438254 KRBA2Q6ZNG9 492 aa10.9□□□□□ -0.66
CUBN-204ENST00000438254 FBXO16Q8IX29 292 aaPredicted RBP10.9□□□□□ -0.66
CUBN-204ENST00000438254 APBA2Q99767 749 aa10.9□□□□□ -0.66
CUBN-204ENST00000438254 TINF2Q9BSI4 451 aa10.9□□□□□ -0.66
CUBN-204ENST00000438254 POLR3CQ9BUI4 534 aaPredicted RBP10.9□□□□□ -0.66
CUBN-204ENST00000438254 BLOC1S4Q9NUP1 217 aa10.9□□□□□ -0.66
CUBN-204ENST00000438254 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.9□□□□□ -0.66
CUBN-204ENST00000438254 SLC5A4Q9NY91 659 aa10.9□□□□□ -0.66
CUBN-204ENST00000438254 USP25Q9UHP3 1055 aa10.9□□□□□ -0.66
CUBN-204ENST00000438254 DDX41Q9UJV9 622 aaKnown RBP10.9□□□□□ -0.66
CUBN-204ENST00000438254 GABRQQ9UN88 632 aa10.9□□□□□ -0.66
CUBN-204ENST00000438254 CASP8AP2Q9UKL3 1982 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms