RNA–Protein interactions for RNA: ENST00000436554.5

LINC00271-202, long intergenic non-protein coding RNA 271, humanhuman

TSL 5 BASIC

Gene LINC00271, Length 655 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-202ENST00000436554 RTEL1Q9NZ71 1219 aa13.41□□□□□ -0.26
LINC00271-202ENST00000436554 CD207Q9UJ71 328 aa13.41□□□□□ -0.26
LINC00271-202ENST00000436554 SUPT16HQ9Y5B9 1047 aaKnown RBP13.41□□□□□ -0.26
LINC00271-202ENST00000436554 SPATA31C2B4DYI2 1134 aa13.4□□□□□ -0.26
LINC00271-202ENST00000436554 TBX10O75333 385 aa13.4□□□□□ -0.26
LINC00271-202ENST00000436554 GHRP10912 638 aa13.4□□□□□ -0.26
LINC00271-202ENST00000436554 MRPS9P82933 396 aaKnown RBP13.4□□□□□ -0.26
LINC00271-202ENST00000436554 CAMK1Q14012 370 aa13.4□□□□□ -0.26
LINC00271-202ENST00000436554 BTG3Q14201 252 aaPredicted RBP13.4□□□□□ -0.26
LINC00271-202ENST00000436554 IFIT1BQ5T764 474 aaKnown RBP13.4□□□□□ -0.26
LINC00271-202ENST00000436554 METTL7BQ6UX53 244 aa13.4□□□□□ -0.26
LINC00271-202ENST00000436554 BMP8AQ7Z5Y6 402 aa13.4□□□□□ -0.26
LINC00271-202ENST00000436554 TRIM50Q86XT4 487 aa13.4□□□□□ -0.26
LINC00271-202ENST00000436554 PRSS33Q8NF86 280 aa13.4□□□□□ -0.26
LINC00271-202ENST00000436554 CLP1Q92989 425 aaKnown RBP13.4□□□□□ -0.26
LINC00271-202ENST00000436554 PBXIP1Q96AQ6 731 aa13.4□□□□□ -0.26
LINC00271-202ENST00000436554 SNX27Q96L92 541 aa13.4□□□□□ -0.26
LINC00271-202ENST00000436554 PLAGL2Q9UPG8 496 aa13.4□□□□□ -0.26
LINC00271-202ENST00000436554 RWDD3Q9Y3V2 267 aa13.4□□□□□ -0.26
LINC00271-202ENST00000436554 PALM3A6NDB9 673 aaPredicted RBP13.39□□□□□ -0.27
LINC00271-202ENST00000436554 ICAM3P32942 547 aa13.39□□□□□ -0.27
LINC00271-202ENST00000436554 SEMA3FQ13275 785 aa13.39□□□□□ -0.27
LINC00271-202ENST00000436554 NEDD9Q14511 834 aa13.39□□□□□ -0.27
LINC00271-202ENST00000436554 SLC35G1Q2M3R5 365 aa13.39□□□□□ -0.27
LINC00271-202ENST00000436554 CWC27Q6UX04 472 aaKnown RBP13.39□□□□□ -0.27
LINC00271-202ENST00000436554 RUFY4Q6ZNE9 571 aa13.39□□□□□ -0.27
LINC00271-202ENST00000436554 TRIM67Q6ZTA4 783 aa13.39□□□□□ -0.27
LINC00271-202ENST00000436554 HOMER1Q86YM7 354 aa13.39□□□□□ -0.27
LINC00271-202ENST00000436554 LMBR1Q8WVP7 490 aa13.39□□□□□ -0.27
LINC00271-202ENST00000436554 ZNF689Q96CS4 500 aaPredicted RBP13.39□□□□□ -0.27
LINC00271-202ENST00000436554 PIGSQ96S52 555 aa13.39□□□□□ -0.27
LINC00271-202ENST00000436554 UBAC1Q9BSL1 405 aa13.39□□□□□ -0.27
LINC00271-202ENST00000436554 KRT23Q9C075 422 aa13.39□□□□□ -0.27
LINC00271-202ENST00000436554 EHMT1Q9H9B1 1298 aa13.39□□□□□ -0.27
LINC00271-202ENST00000436554 MAD2L2Q9UI95 211 aa13.39□□□□□ -0.27
LINC00271-202ENST00000436554 ADGRA3Q8IWK6 1321 aa13.39□□□□□ -0.27
LINC00271-202ENST00000436554 TMEM221A6NGB7 291 aa13.38□□□□□ -0.27
LINC00271-202ENST00000436554 M0R296 226 aa13.38□□□□□ -0.27
LINC00271-202ENST00000436554 EYA4O95677 639 aa13.38□□□□□ -0.27
LINC00271-202ENST00000436554 MMP1P03956 469 aa13.38□□□□□ -0.27
LINC00271-202ENST00000436554 NDUFV1P49821 464 aa13.38□□□□□ -0.27
LINC00271-202ENST00000436554 SP4Q02446 784 aa13.38□□□□□ -0.27
LINC00271-202ENST00000436554 LPIN1Q14693 890 aa13.38□□□□□ -0.27
LINC00271-202ENST00000436554 GNPTABQ3T906 1256 aa13.38□□□□□ -0.27
LINC00271-202ENST00000436554 MSLNLQ96KJ4 702 aa13.38□□□□□ -0.27
LINC00271-202ENST00000436554 INPP4AQ96PE3 977 aaPredicted RBP13.38□□□□□ -0.27
LINC00271-202ENST00000436554 PLVAPQ9BX97 442 aa13.38□□□□□ -0.27
LINC00271-202ENST00000436554 RC3H2Q9HBD1 1191 aaKnown RBP13.38□□□□□ -0.27
LINC00271-202ENST00000436554 ZNF215Q9UL58 517 aaPredicted RBP13.38□□□□□ -0.27
LINC00271-202ENST00000436554 NRCAMQ92823 1304 aa13.38□□□□□ -0.27
LINC00271-202ENST00000436554 ZNF318Q5VUA4 2279 aa13.37□□□□□ -0.27
LINC00271-202ENST00000436554 TECTAO75443 2155 aa13.37□□□□□ -0.27
LINC00271-202ENST00000436554 DGKIO75912 1065 aa13.37□□□□□ -0.27
LINC00271-202ENST00000436554 DNAJB1P25685 340 aa13.37□□□□□ -0.27
LINC00271-202ENST00000436554 PTPN5P54829 565 aa13.37□□□□□ -0.27
LINC00271-202ENST00000436554 SEC23AQ15436 765 aa13.37□□□□□ -0.27
LINC00271-202ENST00000436554 IMMTQ16891 758 aaKnown RBP13.37□□□□□ -0.27
LINC00271-202ENST00000436554 ADGRD2Q7Z7M1 963 aa13.37□□□□□ -0.27
LINC00271-202ENST00000436554 SPPL3Q8TCT6 385 aa13.37□□□□□ -0.27
LINC00271-202ENST00000436554 LNPKQ9C0E8 428 aa13.37□□□□□ -0.27
LINC00271-202ENST00000436554 RIOX1Q9H6W3 641 aa13.37□□□□□ -0.27
LINC00271-202ENST00000436554 CLEC1BQ9P126 229 aa13.37□□□□□ -0.27
LINC00271-202ENST00000436554 LOC730098B7Z3J9 87 aa13.36□□□□□ -0.27
LINC00271-202ENST00000436554 FIBPO43427 364 aa13.36□□□□□ -0.27
LINC00271-202ENST00000436554 STAM2O75886 525 aa13.36□□□□□ -0.27
LINC00271-202ENST00000436554 ITGB1P05556 798 aa13.36□□□□□ -0.27
LINC00271-202ENST00000436554 ZXDAP98168 799 aa13.36□□□□□ -0.27
LINC00271-202ENST00000436554 MGAT3Q09327 533 aa13.36□□□□□ -0.27
LINC00271-202ENST00000436554 TCF15Q12870 199 aa13.36□□□□□ -0.27
LINC00271-202ENST00000436554 TRAF1Q13077 416 aa13.36□□□□□ -0.27
LINC00271-202ENST00000436554 PKN1Q16512 942 aa13.36□□□□□ -0.27
LINC00271-202ENST00000436554 TAF2Q6P1X5 1199 aa13.36□□□□□ -0.27
LINC00271-202ENST00000436554 CYB5R4Q7L1T6 521 aa13.36□□□□□ -0.27
LINC00271-202ENST00000436554 RBM23Q86U06 439 aaKnown RBP13.36□□□□□ -0.27
LINC00271-202ENST00000436554 RTN4RL1Q86UN2 441 aaPredicted RBP13.36□□□□□ -0.27
LINC00271-202ENST00000436554 DNAJB3Q8WWF6 145 aa13.36□□□□□ -0.27
LINC00271-202ENST00000436554 CNNM2Q9H8M5 875 aa13.36□□□□□ -0.27
LINC00271-202ENST00000436554 MRPL42Q9Y6G3 142 aaKnown RBP13.36□□□□□ -0.27
LINC00271-202ENST00000436554 COL4A6Q14031 1691 aa13.35□□□□□ -0.27
LINC00271-202ENST00000436554 PNMA6FA0A0J9YX94 578 aa13.35□□□□□ -0.27
LINC00271-202ENST00000436554 CYTH3O43739 400 aa13.35□□□□□ -0.27
LINC00271-202ENST00000436554 ST18O60284 1047 aa13.35□□□□□ -0.27
LINC00271-202ENST00000436554 HDAC1Q13547 482 aaPredicted RBP13.35□□□□□ -0.27
LINC00271-202ENST00000436554 NAALADL2Q58DX5 795 aa13.35□□□□□ -0.27
LINC00271-202ENST00000436554 FBXO47Q5MNV8 452 aa13.35□□□□□ -0.27
LINC00271-202ENST00000436554 RSPH3Q86UC2 560 aa13.35□□□□□ -0.27
LINC00271-202ENST00000436554 SUGP1Q8IWZ8 645 aaKnown RBP13.35□□□□□ -0.27
LINC00271-202ENST00000436554 EFHBQ8N7U6 833 aa13.35□□□□□ -0.27
LINC00271-202ENST00000436554 KLHL23Q8NBE8 558 aa13.35□□□□□ -0.27
LINC00271-202ENST00000436554 PIBF1Q8WXW3 757 aa13.35□□□□□ -0.27
LINC00271-202ENST00000436554 P2RX5Q93086 422 aa13.35□□□□□ -0.27
LINC00271-202ENST00000436554 PPP2R3CQ969Q6 453 aa13.35□□□□□ -0.27
LINC00271-202ENST00000436554 PRRX2Q99811 253 aa13.35□□□□□ -0.27
LINC00271-202ENST00000436554 SENP7Q9BQF6 1050 aa13.35□□□□□ -0.27
LINC00271-202ENST00000436554 DSCC1Q9BVC3 393 aa13.35□□□□□ -0.27
LINC00271-202ENST00000436554 AGO3Q9H9G7 860 aaKnown RBP13.35□□□□□ -0.27
LINC00271-202ENST00000436554 DIAPH3Q9NSV4 1193 aa13.35□□□□□ -0.27
LINC00271-202ENST00000436554 CDY2AQ9Y6F7 541 aa13.35□□□□□ -0.27
LINC00271-202ENST00000436554 ATP9AO75110 1047 aa13.34□□□□□ -0.27
LINC00271-202ENST00000436554 PPFIA3O75145 1194 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms