RNA–Protein interactions for RNA: ENST00000435817.6

FCHSD1-201, Transcript of FCH and double SH3 domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FCHSD1, Length 4,320 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCHSD1-201ENST00000435817 NKX2-3Q8TAU0 364 aa13.34□□□□□ -0.27
FCHSD1-201ENST00000435817 TSNARE1Q96NA8 513 aa13.34□□□□□ -0.27
FCHSD1-201ENST00000435817 KCNQ5Q9NR82 932 aa13.34□□□□□ -0.27
FCHSD1-201ENST00000435817 TSKSQ9UJT2 592 aa13.34□□□□□ -0.27
FCHSD1-201ENST00000435817 AKT3Q9Y243 479 aa13.34□□□□□ -0.27
FCHSD1-201ENST00000435817 VIMP08670 466 aaKnown RBP13.33□□□□□ -0.27
FCHSD1-201ENST00000435817 AP3B2Q13367 1082 aa13.33□□□□□ -0.27
FCHSD1-201ENST00000435817 NAA30Q147X3 362 aaPredicted RBP13.33□□□□□ -0.27
FCHSD1-201ENST00000435817 KRT71Q3SY84 523 aa13.33□□□□□ -0.27
FCHSD1-201ENST00000435817 UNC13DQ70J99 1090 aa13.33□□□□□ -0.27
FCHSD1-201ENST00000435817 EFCAB8A8MWE9 144 aa13.33□□□□□ -0.28
FCHSD1-201ENST00000435817 M0QZ92 97 aa13.33□□□□□ -0.28
FCHSD1-201ENST00000435817 NDUFB10O96000 172 aa13.33□□□□□ -0.28
FCHSD1-201ENST00000435817 LACTBP83111 547 aaPredicted RBP13.33□□□□□ -0.28
FCHSD1-201ENST00000435817 MTMR1Q13613 665 aa13.33□□□□□ -0.28
FCHSD1-201ENST00000435817 MB21D1Q8N884 522 aa13.33□□□□□ -0.28
FCHSD1-201ENST00000435817 KCNB2Q92953 911 aa13.33□□□□□ -0.28
FCHSD1-201ENST00000435817 LRRC45Q96CN5 670 aa13.33□□□□□ -0.28
FCHSD1-201ENST00000435817 RNF146Q9NTX7 359 aa13.33□□□□□ -0.28
FCHSD1-201ENST00000435817 NXF1Q9UBU9 619 aaKnown RBP13.33□□□□□ -0.28
FCHSD1-201ENST00000435817 BSPRYQ5W0U4 402 aa13.33□□□□□ -0.28
FCHSD1-201ENST00000435817 ZBTB33Q86T24 672 aa13.33□□□□□ -0.28
FCHSD1-201ENST00000435817 KSR1Q8IVT5 923 aa13.33□□□□□ -0.28
FCHSD1-201ENST00000435817 AFAP1L1Q8TED9 768 aa13.33□□□□□ -0.28
FCHSD1-201ENST00000435817 DPF2Q92785 391 aa13.33□□□□□ -0.28
FCHSD1-201ENST00000435817 ACCSQ96QU6 501 aa13.33□□□□□ -0.28
FCHSD1-201ENST00000435817 UBE2TQ9NPD8 197 aaPredicted RBP13.33□□□□□ -0.28
FCHSD1-201ENST00000435817 RGL1Q9NZL6 768 aa13.33□□□□□ -0.28
FCHSD1-201ENST00000435817 FAM184BQ9ULE4 1060 aa13.33□□□□□ -0.28
FCHSD1-201ENST00000435817 FAM169AQ9Y6X4 670 aa13.33□□□□□ -0.28
FCHSD1-201ENST00000435817 CNTNAP4Q9C0A0 1308 aa13.33□□□□□ -0.28
FCHSD1-201ENST00000435817 N4BP1O75113 896 aaKnown RBP13.32□□□□□ -0.28
FCHSD1-201ENST00000435817 MXI1P50539 228 aa13.32□□□□□ -0.28
FCHSD1-201ENST00000435817 SBK1Q52WX2 424 aa13.32□□□□□ -0.28
FCHSD1-201ENST00000435817 STRIP1Q5VSL9 837 aa13.32□□□□□ -0.28
FCHSD1-201ENST00000435817 FAM160B1Q5W0V3 765 aa13.32□□□□□ -0.28
FCHSD1-201ENST00000435817 CAPN12Q6ZSI9 719 aa13.32□□□□□ -0.28
FCHSD1-201ENST00000435817 DYDC2Q96IM9 177 aa13.32□□□□□ -0.28
FCHSD1-201ENST00000435817 RIOK1Q9BRS2 568 aaKnown RBP13.32□□□□□ -0.28
FCHSD1-201ENST00000435817 NHEJ1Q9H9Q4 299 aaPredicted RBP13.32□□□□□ -0.28
FCHSD1-201ENST00000435817 MYO3BQ8WXR4 1341 aa13.32□□□□□ -0.28
FCHSD1-201ENST00000435817 AP5Z1O43299 807 aa13.32□□□□□ -0.28
FCHSD1-201ENST00000435817 MYCP01106 439 aaPredicted RBP13.32□□□□□ -0.28
FCHSD1-201ENST00000435817 TNNC2P02585 160 aa13.32□□□□□ -0.28
FCHSD1-201ENST00000435817 TAL1P17542 331 aaPredicted RBP13.32□□□□□ -0.28
FCHSD1-201ENST00000435817 PIK3CAP42336 1068 aa13.32□□□□□ -0.28
FCHSD1-201ENST00000435817 PTK2Q05397 1052 aa13.32□□□□□ -0.28
FCHSD1-201ENST00000435817 ZNF543Q08ER8 600 aa13.32□□□□□ -0.28
FCHSD1-201ENST00000435817 TROAPQ12815 778 aa13.32□□□□□ -0.28
FCHSD1-201ENST00000435817 R3HDM1Q15032 1099 aaKnown RBP13.32□□□□□ -0.28
FCHSD1-201ENST00000435817 PRPF38AQ8NAV1 312 aaKnown RBP13.32□□□□□ -0.28
FCHSD1-201ENST00000435817 RETREG2Q8NC44 543 aa13.32□□□□□ -0.28
FCHSD1-201ENST00000435817 SLC10A4Q96EP9 437 aa13.32□□□□□ -0.28
FCHSD1-201ENST00000435817 NLRP4Q96MN2 994 aa13.32□□□□□ -0.28
FCHSD1-201ENST00000435817 STMN4Q9H169 189 aaPredicted RBP13.32□□□□□ -0.28
FCHSD1-201ENST00000435817 THAP9Q9H5L6 903 aa13.32□□□□□ -0.28
FCHSD1-201ENST00000435817 SPC25Q9HBM1 224 aa13.32□□□□□ -0.28
FCHSD1-201ENST00000435817 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.32□□□□□ -0.28
FCHSD1-201ENST00000435817 TCRBV5S4A2TA0A5A2 114 aa13.32□□□□□ -0.28
FCHSD1-201ENST00000435817 NDUFAB1O14561 156 aa13.32□□□□□ -0.28
FCHSD1-201ENST00000435817 MOCS3O95396 460 aa13.32□□□□□ -0.28
FCHSD1-201ENST00000435817 NSFP46459 744 aaKnown RBP13.32□□□□□ -0.28
FCHSD1-201ENST00000435817 NFIAQ12857 509 aa13.32□□□□□ -0.28
FCHSD1-201ENST00000435817 USP27XA6NNY8 438 aa13.32□□□□□ -0.28
FCHSD1-201ENST00000435817 MFAP3LO75121 409 aa13.32□□□□□ -0.28
FCHSD1-201ENST00000435817 SEC31AO94979 1220 aaKnown RBP13.32□□□□□ -0.28
FCHSD1-201ENST00000435817 NT5C2P49902 561 aa13.32□□□□□ -0.28
FCHSD1-201ENST00000435817 GUCY2DQ02846 1103 aa13.32□□□□□ -0.28
FCHSD1-201ENST00000435817 LRRC63Q05C16 580 aa13.32□□□□□ -0.28
FCHSD1-201ENST00000435817 TMED8Q6PL24 325 aaPredicted RBP13.32□□□□□ -0.28
FCHSD1-201ENST00000435817 SARM1Q6SZW1 724 aa13.32□□□□□ -0.28
FCHSD1-201ENST00000435817 COL23A1Q86Y22 540 aaPredicted RBP13.32□□□□□ -0.28
FCHSD1-201ENST00000435817 CDHR1Q96JP9 859 aa13.32□□□□□ -0.28
FCHSD1-201ENST00000435817 PHF20Q9BVI0 1012 aa13.32□□□□□ -0.28
FCHSD1-201ENST00000435817 SLC5A4Q9NY91 659 aa13.32□□□□□ -0.28
FCHSD1-201ENST00000435817 H0YCG3 227 aa13.31□□□□□ -0.28
FCHSD1-201ENST00000435817 K7ERI5 159 aa13.31□□□□□ -0.28
FCHSD1-201ENST00000435817 CCNA1P78396 465 aa13.31□□□□□ -0.28
FCHSD1-201ENST00000435817 IFRD2Q12894 506 aaPredicted RBP13.31□□□□□ -0.28
FCHSD1-201ENST00000435817 PSMD2Q13200 908 aa13.31□□□□□ -0.28
FCHSD1-201ENST00000435817 KAZNQ674X7 775 aa13.31□□□□□ -0.28
FCHSD1-201ENST00000435817 FBF1Q8TES7 1133 aa13.31□□□□□ -0.28
FCHSD1-201ENST00000435817 PCDHB4Q9Y5E5 795 aa13.31□□□□□ -0.28
FCHSD1-201ENST00000435817 IPO5O00410 1097 aaKnown RBP13.31□□□□□ -0.28
FCHSD1-201ENST00000435817 GAS8O95995 478 aa13.31□□□□□ -0.28
FCHSD1-201ENST00000435817 ATP2A2P16615 1042 aaKnown RBP13.31□□□□□ -0.28
FCHSD1-201ENST00000435817 CCND2P30279 289 aa13.31□□□□□ -0.28
FCHSD1-201ENST00000435817 IREB2P48200 963 aaKnown RBP13.31□□□□□ -0.28
FCHSD1-201ENST00000435817 HMGCS2P54868 508 aa13.31□□□□□ -0.28
FCHSD1-201ENST00000435817 AMIGO3Q86WK7 504 aa13.31□□□□□ -0.28
FCHSD1-201ENST00000435817 IPO4Q8TEX9 1081 aaKnown RBP13.31□□□□□ -0.28
FCHSD1-201ENST00000435817 NBPF3Q9H094 633 aa13.31□□□□□ -0.28
FCHSD1-201ENST00000435817 MYO1FO00160 1098 aa13.31□□□□□ -0.28
FCHSD1-201ENST00000435817 KIF11P52732 1056 aa13.31□□□□□ -0.28
FCHSD1-201ENST00000435817 SRGAP1Q7Z6B7 1085 aa13.31□□□□□ -0.28
FCHSD1-201ENST00000435817 PDLIM2Q96JY6 352 aa13.31□□□□□ -0.28
FCHSD1-201ENST00000435817 KRT12Q99456 494 aa13.31□□□□□ -0.28
FCHSD1-201ENST00000435817 TMEM60Q9H2L4 133 aa13.31□□□□□ -0.28
FCHSD1-201ENST00000435817 RNF181Q9P0P0 153 aa13.31□□□□□ -0.28
FCHSD1-201ENST00000435817 FMN2Q9NZ56 1722 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms