RNA–Protein interactions for RNA: ENST00000435495.6

PTPN12-206, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2 BASIC

Gene PTPN12, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-206ENST00000435495 TTC17Q96AE7 1141 aa5.04□□□□□ -1.6
PTPN12-206ENST00000435495 FUBP3Q96I24 572 aaKnown RBP eCLIP5.04□□□□□ -1.63e-15■■■□□ 16.9
PTPN12-206ENST00000435495 MRGPRX3Q96LB0 322 aa5.04□□□□□ -1.6
PTPN12-206ENST00000435495 NUDT16L1Q9BRJ7 211 aaKnown RBP5.04□□□□□ -1.6
PTPN12-206ENST00000435495 MCMBPQ9BTE3 642 aa5.04□□□□□ -1.6
PTPN12-206ENST00000435495 APOL5Q9BWW9 433 aa5.04□□□□□ -1.6
PTPN12-206ENST00000435495 SLC13A1Q9BZW2 595 aa5.04□□□□□ -1.6
PTPN12-206ENST00000435495 PUS7LQ9H0K6 701 aaKnown RBP5.04□□□□□ -1.6
PTPN12-206ENST00000435495 SMOC1Q9H4F8 434 aa5.04□□□□□ -1.6
PTPN12-206ENST00000435495 ATP6V0A4Q9HBG4 840 aa5.04□□□□□ -1.6
PTPN12-206ENST00000435495 VPS45Q9NRW7 570 aa5.04□□□□□ -1.6
PTPN12-206ENST00000435495 STK26Q9P289 416 aa5.04□□□□□ -1.6
PTPN12-206ENST00000435495 PDP2Q9P2J9 529 aa5.04□□□□□ -1.6
PTPN12-206ENST00000435495 TMEFF2Q9UIK5 374 aaPredicted RBP5.04□□□□□ -1.6
PTPN12-206ENST00000435495 RCAN3Q9UKA8 241 aa5.04□□□□□ -1.6
PTPN12-206ENST00000435495 PCDHGA9Q9Y5G4 932 aaKnown RBP5.04□□□□□ -1.6
PTPN12-206ENST00000435495 PCDHGA8Q9Y5G5 932 aa5.04□□□□□ -1.6
PTPN12-206ENST00000435495 PCDHGA7Q9Y5G6 932 aa5.04□□□□□ -1.6
PTPN12-206ENST00000435495 PCDHGA6Q9Y5G7 932 aa5.04□□□□□ -1.6
PTPN12-206ENST00000435495 PCDHGA3Q9Y5H0 932 aa5.04□□□□□ -1.6
PTPN12-206ENST00000435495 PCDHGA2Q9Y5H1 932 aa5.04□□□□□ -1.6
PTPN12-206ENST00000435495 RTCAO00442 366 aaKnown RBP5.04□□□□□ -1.6
PTPN12-206ENST00000435495 ELL2O00472 640 aaPredicted RBP5.04□□□□□ -1.6
PTPN12-206ENST00000435495 HTATSF1O43719 755 aaKnown RBP5.04□□□□□ -1.6
PTPN12-206ENST00000435495 AOC2O75106 756 aa5.04□□□□□ -1.6
PTPN12-206ENST00000435495 LRRN2O75325 713 aa5.04□□□□□ -1.6
PTPN12-206ENST00000435495 FBXO21O94952 628 aa5.04□□□□□ -1.6
PTPN12-206ENST00000435495 CPEP16870 476 aa5.04□□□□□ -1.6
PTPN12-206ENST00000435495 BPIP17213 487 aa5.04□□□□□ -1.6
PTPN12-206ENST00000435495 XPAP23025 273 aaPredicted RBP5.04□□□□□ -1.6
PTPN12-206ENST00000435495 IL4RP24394 825 aa5.04□□□□□ -1.6
PTPN12-206ENST00000435495 USP14P54578 494 aa5.04□□□□□ -1.6
PTPN12-206ENST00000435495 SCAND1P57086 179 aa5.04□□□□□ -1.6
PTPN12-206ENST00000435495 ZNF445P59923 1031 aa5.04□□□□□ -1.6
PTPN12-206ENST00000435495 UBXN2AP68543 259 aa5.04□□□□□ -1.6
PTPN12-206ENST00000435495 PLIN5Q00G26 463 aa5.04□□□□□ -1.6
PTPN12-206ENST00000435495 SLBPQ14493 270 aaKnown RBP eCLIP5.04□□□□□ -1.6
PTPN12-206ENST00000435495 KLHL10Q6JEL2 608 aa5.04□□□□□ -1.6
PTPN12-206ENST00000435495 FSTL4Q6MZW2 842 aa5.04□□□□□ -1.6
PTPN12-206ENST00000435495 RETSATQ6NUM9 610 aa5.04□□□□□ -1.6
PTPN12-206ENST00000435495 SMC1BQ8NDV3 1235 aa5.04□□□□□ -1.6
PTPN12-206ENST00000435495 OR8H1Q8NGG4 311 aa5.04□□□□□ -1.6
PTPN12-206ENST00000435495 LILRB1Q8NHL6 650 aaPredicted RBP5.04□□□□□ -1.6
PTPN12-206ENST00000435495 UBASH3BQ8TF42 649 aa5.04□□□□□ -1.6
PTPN12-206ENST00000435495 CHTF18Q8WVB6 975 aa5.04□□□□□ -1.6
PTPN12-206ENST00000435495 SLC2A13Q96QE2 648 aa5.04□□□□□ -1.6
PTPN12-206ENST00000435495 MRPL9Q9BYD2 267 aaKnown RBP5.04□□□□□ -1.6
PTPN12-206ENST00000435495 PDLIM7Q9NR12 457 aa5.04□□□□□ -1.6
PTPN12-206ENST00000435495 TRMT13Q9NUP7 481 aaKnown RBP5.04□□□□□ -1.6
PTPN12-206ENST00000435495 STXBP3O00186 592 aa5.03□□□□□ -1.6
PTPN12-206ENST00000435495 BRINP1O60477 761 aa5.03□□□□□ -1.6
PTPN12-206ENST00000435495 SLC4A1P02730 911 aa5.03□□□□□ -1.6
PTPN12-206ENST00000435495 SNRPB2P08579 225 aaKnown RBP5.03□□□□□ -1.6
PTPN12-206ENST00000435495 LCP1P13796 627 aa5.03□□□□□ -1.6
PTPN12-206ENST00000435495 ZKSCAN1P17029 563 aaPredicted RBP5.03□□□□□ -1.6
PTPN12-206ENST00000435495 GUCY1A3Q02108 690 aa5.03□□□□□ -1.6
PTPN12-206ENST00000435495 NEUROD1Q13562 356 aa5.03□□□□□ -1.6
PTPN12-206ENST00000435495 LLGL1Q15334 1064 aa5.03□□□□□ -1.6
PTPN12-206ENST00000435495 ARMC4Q5T2S8 1044 aa5.03□□□□□ -1.6
PTPN12-206ENST00000435495 SPNS2Q8IVW8 549 aa5.03□□□□□ -1.6
PTPN12-206ENST00000435495 CCDC103Q8IW40 242 aa5.03□□□□□ -1.6
PTPN12-206ENST00000435495 TRIM59Q8IWR1 403 aa5.03□□□□□ -1.6
PTPN12-206ENST00000435495 CARNMT1Q8N4J0 409 aa5.03□□□□□ -1.6
PTPN12-206ENST00000435495 UHMK1Q8TAS1 419 aaKnown RBP5.03□□□□□ -1.6
PTPN12-206ENST00000435495 JAKMIP2Q96AA8 810 aa5.03□□□□□ -1.6
PTPN12-206ENST00000435495 RSRC1Q96IZ7 334 aaKnown RBP5.03□□□□□ -1.6
PTPN12-206ENST00000435495 SGCZQ96LD1 299 aa5.03□□□□□ -1.6
PTPN12-206ENST00000435495 DISC1Q9NRI5 854 aa5.03□□□□□ -1.6
PTPN12-206ENST00000435495 MKS1Q9NXB0 559 aa5.03□□□□□ -1.6
PTPN12-206ENST00000435495 NFKBIL1Q9UBC1 381 aaPredicted RBP5.03□□□□□ -1.6
PTPN12-206ENST00000435495 AP4E1Q9UPM8 1137 aa5.03□□□□□ -1.6
PTPN12-206ENST00000435495 CRYL1Q9Y2S2 319 aa5.03□□□□□ -1.6
PTPN12-206ENST00000435495 FOXN3O00409 490 aaPredicted RBP5.03□□□□□ -1.6
PTPN12-206ENST00000435495 TRAF5O00463 557 aa5.03□□□□□ -1.6
PTPN12-206ENST00000435495 COQ9O75208 318 aa5.03□□□□□ -1.6
PTPN12-206ENST00000435495 TPPPO94811 219 aa5.03□□□□□ -1.6
PTPN12-206ENST00000435495 WISP1O95388 367 aa5.03□□□□□ -1.6
PTPN12-206ENST00000435495 ASLP04424 464 aa5.03□□□□□ -1.6
PTPN12-206ENST00000435495 AFF1P51825 1210 aaKnown RBP5.03□□□□□ -1.6
PTPN12-206ENST00000435495 SLC9A5Q14940 896 aa5.03□□□□□ -1.6
PTPN12-206ENST00000435495 NUTM2GQ5VZR2 741 aa5.03□□□□□ -1.6
PTPN12-206ENST00000435495 PGM2L1Q6PCE3 622 aa5.03□□□□□ -1.6
PTPN12-206ENST00000435495 CCBE1Q6UXH8 406 aaPredicted RBP5.03□□□□□ -1.6
PTPN12-206ENST00000435495 MYLK4Q86YV6 388 aaPredicted RBP5.03□□□□□ -1.6
PTPN12-206ENST00000435495 ERC1Q8IUD2 1116 aa5.03□□□□□ -1.6
PTPN12-206ENST00000435495 IQCF2Q8IXL9 164 aa5.03□□□□□ -1.6
PTPN12-206ENST00000435495 TEX11Q8IYF3 940 aa5.03□□□□□ -1.6
PTPN12-206ENST00000435495 CISD2Q8N5K1 135 aaKnown RBP5.03□□□□□ -1.6
PTPN12-206ENST00000435495 SPATA5Q8NB90 893 aa5.03□□□□□ -1.6
PTPN12-206ENST00000435495 PTPRN2Q92932 1015 aa5.03□□□□□ -1.6
PTPN12-206ENST00000435495 ITFG2Q969R8 447 aa5.03□□□□□ -1.6
PTPN12-206ENST00000435495 DDX11Q96FC9 970 aa5.03□□□□□ -1.6
PTPN12-206ENST00000435495 MAGEB10Q96LZ2 347 aaPredicted RBP5.03□□□□□ -1.6
PTPN12-206ENST00000435495 PAIP2Q9BPZ3 127 aaKnown RBP5.03□□□□□ -1.6
PTPN12-206ENST00000435495 GTPBP4Q9BZE4 634 aaKnown RBP5.03□□□□□ -1.6
PTPN12-206ENST00000435495 GP6Q9HCN6 339 aa5.03□□□□□ -1.6
PTPN12-206ENST00000435495 MKL2Q9ULH7 1088 aa5.03□□□□□ -1.6
PTPN12-206ENST00000435495 EMC9Q9Y3B6 208 aa5.03□□□□□ -1.6
PTPN12-206ENST00000435495 STARD13Q9Y3M8 1113 aa5.03□□□□□ -1.6
PTPN12-206ENST00000435495 A0A0G2JS52 829 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms