RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 ADHFE1Q8IWW8 467 aa13.4□□□□□ -0.26
CHRNA1-207ENST00000435083 LMBR1Q8WVP7 490 aa13.4□□□□□ -0.26
CHRNA1-207ENST00000435083 C11orf84Q9BUA3 381 aaPredicted RBP13.4□□□□□ -0.26
CHRNA1-207ENST00000435083 UPF3BQ9BZI7 483 aaKnown RBP13.4□□□□□ -0.26
CHRNA1-207ENST00000435083 C19orf67A6NJJ6 358 aa13.39□□□□□ -0.27
CHRNA1-207ENST00000435083 GRM6O15303 877 aa13.39□□□□□ -0.27
CHRNA1-207ENST00000435083 NCK2O43639 380 aa13.39□□□□□ -0.27
CHRNA1-207ENST00000435083 CSPG5O95196 566 aa13.39□□□□□ -0.27
CHRNA1-207ENST00000435083 CHRNA1P02708 482 aa13.39□□□□□ -0.27
CHRNA1-207ENST00000435083 RB1P06400 928 aa13.39□□□□□ -0.27
CHRNA1-207ENST00000435083 GHRP10912 638 aa13.39□□□□□ -0.27
CHRNA1-207ENST00000435083 BMPR1AP36894 532 aa13.39□□□□□ -0.27
CHRNA1-207ENST00000435083 LTBRP36941 435 aa13.39□□□□□ -0.27
CHRNA1-207ENST00000435083 ADAM17P78536 824 aa13.39□□□□□ -0.27
CHRNA1-207ENST00000435083 LMAN2LQ9H0V9 348 aa13.39□□□□□ -0.27
CHRNA1-207ENST00000435083 IL25Q9H293 177 aa13.39□□□□□ -0.27
CHRNA1-207ENST00000435083 IGFLR1Q9H665 355 aa13.39□□□□□ -0.27
CHRNA1-207ENST00000435083 SENP2Q9HC62 589 aa13.39□□□□□ -0.27
CHRNA1-207ENST00000435083 KAT6AQ92794 2004 aa13.38□□□□□ -0.27
CHRNA1-207ENST00000435083 FRMPD4Q14CM0 1322 aa13.38□□□□□ -0.27
CHRNA1-207ENST00000435083 ADGRA3Q8IWK6 1321 aa13.38□□□□□ -0.27
CHRNA1-207ENST00000435083 NRCAMQ92823 1304 aa13.38□□□□□ -0.27
CHRNA1-207ENST00000435083 MUC6Q6W4X9 2439 aa13.38□□□□□ -0.27
CHRNA1-207ENST00000435083 C5orf67F2Z3F1 127 aa13.38□□□□□ -0.27
CHRNA1-207ENST00000435083 IGHDP01880 384 aa13.38□□□□□ -0.27
CHRNA1-207ENST00000435083 IRS1P35568 1242 aa13.38□□□□□ -0.27
CHRNA1-207ENST00000435083 MRE11P49959 708 aa13.38□□□□□ -0.27
CHRNA1-207ENST00000435083 HYAL1Q12794 435 aa13.38□□□□□ -0.27
CHRNA1-207ENST00000435083 RUFY4Q6ZNE9 571 aa13.38□□□□□ -0.27
CHRNA1-207ENST00000435083 SMARCC2Q8TAQ2 1214 aa13.38□□□□□ -0.27
CHRNA1-207ENST00000435083 FBXL18Q96ME1 805 aa13.38□□□□□ -0.27
CHRNA1-207ENST00000435083 RWDD3Q9Y3V2 267 aa13.38□□□□□ -0.27
CHRNA1-207ENST00000435083 MBTPS2O43462 519 aa13.37□□□□□ -0.27
CHRNA1-207ENST00000435083 DLX2Q07687 328 aaPredicted RBP13.37□□□□□ -0.27
CHRNA1-207ENST00000435083 BTG3Q14201 252 aaPredicted RBP13.37□□□□□ -0.27
CHRNA1-207ENST00000435083 LPIN1Q14693 890 aa13.37□□□□□ -0.27
CHRNA1-207ENST00000435083 WTAPQ15007 396 aa13.37□□□□□ -0.27
CHRNA1-207ENST00000435083 CTC1Q2NKJ3 1217 aa13.37□□□□□ -0.27
CHRNA1-207ENST00000435083 RSPH3Q86UC2 560 aa13.37□□□□□ -0.27
CHRNA1-207ENST00000435083 NLRX1Q86UT6 975 aa13.37□□□□□ -0.27
CHRNA1-207ENST00000435083 CUL5Q93034 780 aa13.37□□□□□ -0.27
CHRNA1-207ENST00000435083 EHMT1Q9H9B1 1298 aa13.37□□□□□ -0.27
CHRNA1-207ENST00000435083 ATG2AQ2TAZ0 1938 aa13.37□□□□□ -0.27
CHRNA1-207ENST00000435083 ENPP3O14638 875 aa13.37□□□□□ -0.27
CHRNA1-207ENST00000435083 GTF2F1P35269 517 aaKnown RBP eCLIP13.37□□□□□ -0.27
CHRNA1-207ENST00000435083 TCF7P36402 384 aaPredicted RBP13.37□□□□□ -0.27
CHRNA1-207ENST00000435083 NHLH1Q02575 133 aa13.37□□□□□ -0.27
CHRNA1-207ENST00000435083 TROAPQ12815 778 aa13.37□□□□□ -0.27
CHRNA1-207ENST00000435083 SMAD2Q15796 467 aaKnown RBP13.37□□□□□ -0.27
CHRNA1-207ENST00000435083 PCNX4Q63HM2 1172 aa13.37□□□□□ -0.27
CHRNA1-207ENST00000435083 TAF2Q6P1X5 1199 aa13.37□□□□□ -0.27
CHRNA1-207ENST00000435083 USP17L6PQ6QN14 398 aa13.37□□□□□ -0.27
CHRNA1-207ENST00000435083 RALYLQ86SE5 291 aaKnown RBP13.37□□□□□ -0.27
CHRNA1-207ENST00000435083 GIMAP8Q8ND71 665 aaPredicted RBP13.37□□□□□ -0.27
CHRNA1-207ENST00000435083 SENP7Q9BQF6 1050 aa13.37□□□□□ -0.27
CHRNA1-207ENST00000435083 ALG13Q9NP73 1137 aaKnown RBP13.37□□□□□ -0.27
CHRNA1-207ENST00000435083 MYO7AQ13402 2215 aa13.36□□□□□ -0.27
CHRNA1-207ENST00000435083 LINC01565O15544 149 aa13.36□□□□□ -0.27
CHRNA1-207ENST00000435083 CYP21A2P08686 494 aa13.36□□□□□ -0.27
CHRNA1-207ENST00000435083 LINC00271P0C7V0 271 aa13.36□□□□□ -0.27
CHRNA1-207ENST00000435083 MARK3P27448 753 aa13.36□□□□□ -0.27
CHRNA1-207ENST00000435083 MGAT3Q09327 533 aa13.36□□□□□ -0.27
CHRNA1-207ENST00000435083 PPFIA1Q13136 1202 aa13.36□□□□□ -0.27
CHRNA1-207ENST00000435083 AAMPQ13685 434 aa13.36□□□□□ -0.27
CHRNA1-207ENST00000435083 SART3Q15020 963 aaKnown RBP13.36□□□□□ -0.27
CHRNA1-207ENST00000435083 HFE2Q6ZVN8 426 aa13.36□□□□□ -0.27
CHRNA1-207ENST00000435083 CATIPQ7Z7H3 387 aa13.36□□□□□ -0.27
CHRNA1-207ENST00000435083 DNAJB3Q8WWF6 145 aa13.36□□□□□ -0.27
CHRNA1-207ENST00000435083 CLP1Q92989 425 aaKnown RBP13.36□□□□□ -0.27
CHRNA1-207ENST00000435083 POP1Q99575 1024 aaKnown RBP13.36□□□□□ -0.27
CHRNA1-207ENST00000435083 KCNH6Q9H252 994 aa13.36□□□□□ -0.27
CHRNA1-207ENST00000435083 MUTYHQ9UIF7 546 aa13.36□□□□□ -0.27
CHRNA1-207ENST00000435083 U3KPZ7 1027 aaPredicted RBP13.36□□□□□ -0.27
CHRNA1-207ENST00000435083 MMP1P03956 469 aa13.35□□□□□ -0.27
CHRNA1-207ENST00000435083 GRIK4Q16099 956 aa13.35□□□□□ -0.27
CHRNA1-207ENST00000435083 FBXO47Q5MNV8 452 aa13.35□□□□□ -0.27
CHRNA1-207ENST00000435083 XRRA1Q6P2D8 792 aa13.35□□□□□ -0.27
CHRNA1-207ENST00000435083 RNF135Q8IUD6 432 aa13.35□□□□□ -0.27
CHRNA1-207ENST00000435083 NCOA7Q8NI08 942 aa13.35□□□□□ -0.27
CHRNA1-207ENST00000435083 SEPT1Q8WYJ6 367 aa13.35□□□□□ -0.27
CHRNA1-207ENST00000435083 GLG1Q92896 1179 aa13.35□□□□□ -0.27
CHRNA1-207ENST00000435083 ZNF689Q96CS4 500 aaPredicted RBP13.35□□□□□ -0.27
CHRNA1-207ENST00000435083 RRP36Q96EU6 259 aaKnown RBP13.35□□□□□ -0.27
CHRNA1-207ENST00000435083 RC3H2Q9HBD1 1191 aaKnown RBP13.35□□□□□ -0.27
CHRNA1-207ENST00000435083 CD207Q9UJ71 328 aa13.35□□□□□ -0.27
CHRNA1-207ENST00000435083 TUBE1Q9UJT0 475 aa13.35□□□□□ -0.27
CHRNA1-207ENST00000435083 CDY2AQ9Y6F7 541 aa13.35□□□□□ -0.27
CHRNA1-207ENST00000435083 GSTTP1A0A1W2PQM5 241 aa13.34□□□□□ -0.27
CHRNA1-207ENST00000435083 STXBP3O00186 592 aa13.34□□□□□ -0.27
CHRNA1-207ENST00000435083 MEIS2O14770 477 aa13.34□□□□□ -0.27
CHRNA1-207ENST00000435083 ATP9AO75110 1047 aa13.34□□□□□ -0.27
CHRNA1-207ENST00000435083 TBX10O75333 385 aa13.34□□□□□ -0.27
CHRNA1-207ENST00000435083 DGKIO75912 1065 aa13.34□□□□□ -0.27
CHRNA1-207ENST00000435083 NDUFV1P49821 464 aa13.34□□□□□ -0.27
CHRNA1-207ENST00000435083 IGBP1P78318 339 aa13.34□□□□□ -0.27
CHRNA1-207ENST00000435083 PTH1RQ03431 593 aa13.34□□□□□ -0.27
CHRNA1-207ENST00000435083 ADAM15Q13444 863 aa13.34□□□□□ -0.27
CHRNA1-207ENST00000435083 SMAD4Q13485 552 aaKnown RBP13.34□□□□□ -0.27
CHRNA1-207ENST00000435083 TSHZ1Q6ZSZ6 1077 aa13.34□□□□□ -0.27
CHRNA1-207ENST00000435083 GPRASP2Q96D09 838 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms