RNA–Protein interactions for RNA: ENST00000433555.1

RPUSD3-207, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-207ENST00000433555 SDF4Q9BRK5 362 aa21.49■■□□□ 1.03
RPUSD3-207ENST00000433555 GTF2IRD1Q9UHL9 959 aa21.49■■□□□ 1.03
RPUSD3-207ENST00000433555 RANBP2P49792 3224 aaKnown RBP21.49■■□□□ 1.03
RPUSD3-207ENST00000433555 MYH9P35579 1960 aaKnown RBP21.48■■□□□ 1.03
RPUSD3-207ENST00000433555 CCDC194A0A1B0GVG4 234 aa21.48■■□□□ 1.03
RPUSD3-207ENST00000433555 H3BRB1 525 aa21.48■■□□□ 1.03
RPUSD3-207ENST00000433555 IPO5O00410 1097 aaKnown RBP21.48■■□□□ 1.03
RPUSD3-207ENST00000433555 MSH4O15457 936 aa21.48■■□□□ 1.03
RPUSD3-207ENST00000433555 SLC34A2O95436 690 aa21.48■■□□□ 1.03
RPUSD3-207ENST00000433555 RAG1P15918 1043 aa21.48■■□□□ 1.03
RPUSD3-207ENST00000433555 USP11P51784 963 aa21.48■■□□□ 1.03
RPUSD3-207ENST00000433555 EPHB4P54760 987 aa21.48■■□□□ 1.03
RPUSD3-207ENST00000433555 ACTR2P61160 394 aa21.48■■□□□ 1.03
RPUSD3-207ENST00000433555 PTPN11Q06124 597 aaPredicted RBP21.48■■□□□ 1.03
RPUSD3-207ENST00000433555 DIS3L2Q8IYB7 885 aaKnown RBP21.48■■□□□ 1.03
RPUSD3-207ENST00000433555 MBOAT7Q96N66 472 aa21.48■■□□□ 1.03
RPUSD3-207ENST00000433555 ZNF577Q9BSK1 485 aa21.48■■□□□ 1.03
RPUSD3-207ENST00000433555 NOC4LQ9BVI4 516 aaKnown RBP21.48■■□□□ 1.03
RPUSD3-207ENST00000433555 WNT8AQ9H1J5 351 aa21.48■■□□□ 1.03
RPUSD3-207ENST00000433555 TUT1Q9H6E5 874 aaKnown RBP21.48■■□□□ 1.03
RPUSD3-207ENST00000433555 TRIOBPQ9H2D6 2365 aa21.48■■□□□ 1.03
RPUSD3-207ENST00000433555 KAT6AQ92794 2004 aa21.48■■□□□ 1.03
RPUSD3-207ENST00000433555 BTBD18B2RXH4 712 aa21.47■■□□□ 1.03
RPUSD3-207ENST00000433555 WNT7AO00755 349 aa21.47■■□□□ 1.03
RPUSD3-207ENST00000433555 SLC37A4O43826 429 aa21.47■■□□□ 1.03
RPUSD3-207ENST00000433555 TIMP1P01033 207 aa21.47■■□□□ 1.03
RPUSD3-207ENST00000433555 CYP2C18P33260 490 aa21.47■■□□□ 1.03
RPUSD3-207ENST00000433555 HMGN5P82970 282 aaKnown RBP21.47■■□□□ 1.03
RPUSD3-207ENST00000433555 ZNF200P98182 395 aaPredicted RBP21.47■■□□□ 1.03
RPUSD3-207ENST00000433555 DHX38Q92620 1227 aaKnown RBP21.47■■□□□ 1.03
RPUSD3-207ENST00000433555 LBHD1Q9BQE6 289 aaPredicted RBP21.47■■□□□ 1.03
RPUSD3-207ENST00000433555 EMSYQ7Z589 1322 aa21.47■■□□□ 1.03
RPUSD3-207ENST00000433555 CYP3A7-CYP3A51PA0A087WV96 503 aa21.46■■□□□ 1.03
RPUSD3-207ENST00000433555 LGR5O75473 907 aa21.46■■□□□ 1.03
RPUSD3-207ENST00000433555 SMIM10L2AP0DMW4 78 aa21.46■■□□□ 1.03
RPUSD3-207ENST00000433555 SMIM10L2BP0DMW5 78 aa21.46■■□□□ 1.03
RPUSD3-207ENST00000433555 CYP3A7P24462 503 aa21.46■■□□□ 1.03
RPUSD3-207ENST00000433555 HOXC8P31273 242 aa21.46■■□□□ 1.03
RPUSD3-207ENST00000433555 BMP8BP34820 402 aa21.46■■□□□ 1.03
RPUSD3-207ENST00000433555 Q4G0T1 1027 aa21.46■■□□□ 1.03
RPUSD3-207ENST00000433555 NEK8Q86SG6 692 aa21.46■■□□□ 1.03
RPUSD3-207ENST00000433555 C7orf31Q8N865 590 aa21.46■■□□□ 1.03
RPUSD3-207ENST00000433555 SEPT1Q8WYJ6 367 aa21.46■■□□□ 1.03
RPUSD3-207ENST00000433555 WNT8BQ93098 351 aa21.46■■□□□ 1.03
RPUSD3-207ENST00000433555 C8orf76Q96K31 380 aa21.46■■□□□ 1.03
RPUSD3-207ENST00000433555 UBE2OQ9C0C9 1292 aaKnown RBP21.46■■□□□ 1.03
RPUSD3-207ENST00000433555 HIPK3Q9H422 1215 aa21.46■■□□□ 1.03
RPUSD3-207ENST00000433555 MARK3P27448 753 aa21.45■■□□□ 1.02
RPUSD3-207ENST00000433555 TRIM29Q14134 588 aa21.45■■□□□ 1.02
RPUSD3-207ENST00000433555 PTGISQ16647 500 aa21.45■■□□□ 1.02
RPUSD3-207ENST00000433555 LETM2Q2VYF4 491 aa21.45■■□□□ 1.02
RPUSD3-207ENST00000433555 MOXD1Q6UVY6 613 aa21.45■■□□□ 1.02
RPUSD3-207ENST00000433555 SLC5A5Q92911 643 aa21.45■■□□□ 1.02
RPUSD3-207ENST00000433555 ATG7O95352 703 aa21.44■■□□□ 1.02
RPUSD3-207ENST00000433555 MCM2P49736 904 aa21.44■■□□□ 1.02
RPUSD3-207ENST00000433555 HABP4Q5JVS0 413 aaKnown RBP21.44■■□□□ 1.02
RPUSD3-207ENST00000433555 MFSD5Q6N075 450 aa21.44■■□□□ 1.02
RPUSD3-207ENST00000433555 CCDC60Q8IWA6 550 aaPredicted RBP21.44■■□□□ 1.02
RPUSD3-207ENST00000433555 IL27Q8NEV9 243 aa21.44■■□□□ 1.02
RPUSD3-207ENST00000433555 ETNPPLQ8TBG4 499 aa21.44■■□□□ 1.02
RPUSD3-207ENST00000433555 RNPEPQ9H4A4 650 aa21.44■■□□□ 1.02
RPUSD3-207ENST00000433555 BRMS1Q9HCU9 246 aa21.44■■□□□ 1.02
RPUSD3-207ENST00000433555 ZNF215Q9UL58 517 aaPredicted RBP21.44■■□□□ 1.02
RPUSD3-207ENST00000433555 KIF28PB7ZC32 967 aa21.43■■□□□ 1.02
RPUSD3-207ENST00000433555 SUPT20HL2P0C7V6 817 aa21.43■■□□□ 1.02
RPUSD3-207ENST00000433555 CCL23P55773 120 aa21.43■■□□□ 1.02
RPUSD3-207ENST00000433555 FPGSQ05932 587 aa21.43■■□□□ 1.02
RPUSD3-207ENST00000433555 C9orf50Q5SZB4 431 aa21.43■■□□□ 1.02
RPUSD3-207ENST00000433555 ABHD15Q6UXT9 468 aa21.43■■□□□ 1.02
RPUSD3-207ENST00000433555 FAM184AQ8NB25 1140 aa21.43■■□□□ 1.02
RPUSD3-207ENST00000433555 VWCEQ96DN2 955 aa21.43■■□□□ 1.02
RPUSD3-207ENST00000433555 DDX25Q9UHL0 483 aaKnown RBP21.43■■□□□ 1.02
RPUSD3-207ENST00000433555 IGKV6D-21A0A0A0MT36 114 aa21.42■■□□□ 1.02
RPUSD3-207ENST00000433555 CSF2RAP15509 400 aa21.42■■□□□ 1.02
RPUSD3-207ENST00000433555 TRIM71Q2Q1W2 868 aaKnown RBP21.42■■□□□ 1.02
RPUSD3-207ENST00000433555 POTEDQ86YR6 584 aa21.42■■□□□ 1.02
RPUSD3-207ENST00000433555 TET1Q8NFU7 2136 aa21.42■■□□□ 1.02
RPUSD3-207ENST00000433555 FBXO18Q8NFZ0 1043 aa21.42■■□□□ 1.02
RPUSD3-207ENST00000433555 LMBR1Q8WVP7 490 aa21.42■■□□□ 1.02
RPUSD3-207ENST00000433555 GLG1Q92896 1179 aa21.42■■□□□ 1.02
RPUSD3-207ENST00000433555 SCLYQ96I15 445 aa21.42■■□□□ 1.02
RPUSD3-207ENST00000433555 UNC45AQ9H3U1 944 aa21.42■■□□□ 1.02
RPUSD3-207ENST00000433555 TBC1D22BQ9NU19 505 aa21.42■■□□□ 1.02
RPUSD3-207ENST00000433555 SETD4Q9NVD3 440 aa21.42■■□□□ 1.02
RPUSD3-207ENST00000433555 NOD1Q9Y239 953 aa21.42■■□□□ 1.02
RPUSD3-207ENST00000433555 PTPRSQ13332 1948 aa21.41■■□□□ 1.02
RPUSD3-207ENST00000433555 C17orf102A2RUQ5 167 aa21.41■■□□□ 1.02
RPUSD3-207ENST00000433555 PSMD10O75832 226 aa21.41■■□□□ 1.02
RPUSD3-207ENST00000433555 LRCH2Q5VUJ6 765 aa21.41■■□□□ 1.02
RPUSD3-207ENST00000433555 ZNF746Q6NUN9 644 aaPredicted RBP21.41■■□□□ 1.02
RPUSD3-207ENST00000433555 SMARCAD1Q9H4L7 1026 aa21.41■■□□□ 1.02
RPUSD3-207ENST00000433555 KCNMB3Q9NPA1 279 aa21.41■■□□□ 1.02
RPUSD3-207ENST00000433555 ERAP1Q9NZ08 941 aa21.41■■□□□ 1.02
RPUSD3-207ENST00000433555 GBF1Q92538 1859 aa21.41■■□□□ 1.02
RPUSD3-207ENST00000433555 IGSF9BQ9UPX0 1349 aa21.4■■□□□ 1.02
RPUSD3-207ENST00000433555 TREHO43280 583 aa21.4■■□□□ 1.02
RPUSD3-207ENST00000433555 CHMP2AO43633 222 aa21.4■■□□□ 1.02
RPUSD3-207ENST00000433555 CCNT1O60563 726 aaKnown RBP21.4■■□□□ 1.02
RPUSD3-207ENST00000433555 GAS7O60861 476 aa21.4■■□□□ 1.02
RPUSD3-207ENST00000433555 GJB2P29033 226 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms