RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 SPRYD3Q8NCJ5 442 aa17.56■□□□□ 0.4
TREX1-201ENST00000433541 TNFRSF25Q93038 417 aa17.56■□□□□ 0.4
TREX1-201ENST00000433541 ZMYND8Q9ULU4 1186 aaPredicted RBP17.56■□□□□ 0.4
TREX1-201ENST00000433541 TRIP12Q14669 1992 aaPredicted RBP17.55■□□□□ 0.4
TREX1-201ENST00000433541 H3BRB1 525 aa17.55■□□□□ 0.4
TREX1-201ENST00000433541 SLC37A4O43826 429 aa17.55■□□□□ 0.4
TREX1-201ENST00000433541 MARK3P27448 753 aa17.55■□□□□ 0.4
TREX1-201ENST00000433541 KRT76Q01546 638 aa17.55■□□□□ 0.4
TREX1-201ENST00000433541 INTS4Q96HW7 963 aaKnown RBP17.55■□□□□ 0.4
TREX1-201ENST00000433541 SEZ6LQ9BYH1 1024 aa17.55■□□□□ 0.4
TREX1-201ENST00000433541 TUT1Q9H6E5 874 aaKnown RBP17.55■□□□□ 0.4
TREX1-201ENST00000433541 CEP290O15078 2479 aa17.54■□□□□ 0.4
TREX1-201ENST00000433541 CYP3A7-CYP3A51PA0A087WV96 503 aa17.54■□□□□ 0.4
TREX1-201ENST00000433541 NEMFO60524 1076 aa17.54■□□□□ 0.4
TREX1-201ENST00000433541 F2P00734 622 aa17.54■□□□□ 0.4
TREX1-201ENST00000433541 CLTBP09497 229 aa17.54■□□□□ 0.4
TREX1-201ENST00000433541 CYP3A7P24462 503 aa17.54■□□□□ 0.4
TREX1-201ENST00000433541 MCM7P33993 719 aa17.54■□□□□ 0.4
TREX1-201ENST00000433541 SNX17Q15036 470 aa17.54■□□□□ 0.4
TREX1-201ENST00000433541 C1orf53Q5VUE5 145 aa17.54■□□□□ 0.4
TREX1-201ENST00000433541 PPP4R3AQ6IN85 833 aa17.54■□□□□ 0.4
TREX1-201ENST00000433541 MIS18BP1Q6P0N0 1132 aa17.54■□□□□ 0.4
TREX1-201ENST00000433541 NFRKBQ6P4R8 1299 aa17.54■□□□□ 0.4
TREX1-201ENST00000433541 POTEDQ86YR6 584 aa17.54■□□□□ 0.4
TREX1-201ENST00000433541 GJA10Q969M2 543 aa17.54■□□□□ 0.4
TREX1-201ENST00000433541 LENG9Q96B70 501 aa17.54■□□□□ 0.4
TREX1-201ENST00000433541 TMEM39AQ9NV64 488 aa17.54■□□□□ 0.4
TREX1-201ENST00000433541 TELO2Q9Y4R8 837 aa17.54■□□□□ 0.4
TREX1-201ENST00000433541 GSTTP1A0A1W2PQM5 241 aa17.53■□□□□ 0.4
TREX1-201ENST00000433541 KIF28PB7ZC32 967 aa17.53■□□□□ 0.4
TREX1-201ENST00000433541 PSAPP07602 524 aa17.53■□□□□ 0.4
TREX1-201ENST00000433541 BECN1Q14457 450 aa17.53■□□□□ 0.4
TREX1-201ENST00000433541 CALCRLQ16602 461 aa17.53■□□□□ 0.4
TREX1-201ENST00000433541 FAM160B1Q5W0V3 765 aa17.53■□□□□ 0.4
TREX1-201ENST00000433541 CKAP2LQ8IYA6 745 aa17.53■□□□□ 0.4
TREX1-201ENST00000433541 KAT2BQ92831 832 aa17.53■□□□□ 0.4
TREX1-201ENST00000433541 RIT2Q99578 217 aa17.53■□□□□ 0.4
TREX1-201ENST00000433541 SMARCAD1Q9H4L7 1026 aa17.53■□□□□ 0.4
TREX1-201ENST00000433541 GRIN2DO15399 1336 aa17.52■□□□□ 0.4
TREX1-201ENST00000433541 WDR64B1ANS9 1081 aa17.52■□□□□ 0.4
TREX1-201ENST00000433541 EDIL3O43854 480 aa17.52■□□□□ 0.4
TREX1-201ENST00000433541 HOXD8P13378 290 aaPredicted RBP17.52■□□□□ 0.4
TREX1-201ENST00000433541 TTC38Q5R3I4 469 aa17.52■□□□□ 0.4
TREX1-201ENST00000433541 ZNF746Q6NUN9 644 aaPredicted RBP17.52■□□□□ 0.4
TREX1-201ENST00000433541 TRMT1LQ7Z2T5 733 aaKnown RBP17.52■□□□□ 0.4
TREX1-201ENST00000433541 ANKRD33Q7Z3H0 272 aa17.52■□□□□ 0.4
TREX1-201ENST00000433541 MIER3Q7Z3K6 550 aa17.52■□□□□ 0.4
TREX1-201ENST00000433541 SMAP1Q8IYB5 467 aaPredicted RBP17.52■□□□□ 0.4
TREX1-201ENST00000433541 SLFN12Q8IYM2 578 aa17.52■□□□□ 0.4
TREX1-201ENST00000433541 SLC5A5Q92911 643 aa17.52■□□□□ 0.4
TREX1-201ENST00000433541 LBHD1Q9BQE6 289 aaPredicted RBP17.52■□□□□ 0.4
TREX1-201ENST00000433541 C16orf70Q9BSU1 422 aa17.52■□□□□ 0.4
TREX1-201ENST00000433541 TRPV6Q9H1D0 765 aa17.52■□□□□ 0.4
TREX1-201ENST00000433541 ERAP1Q9NZ08 941 aa17.52■□□□□ 0.4
TREX1-201ENST00000433541 TRPC6Q9Y210 931 aa17.52■□□□□ 0.4
TREX1-201ENST00000433541 H0YGN5 161 aa17.51■□□□□ 0.39
TREX1-201ENST00000433541 DHX15O43143 795 aaKnown RBP17.51■□□□□ 0.39
TREX1-201ENST00000433541 B4GALT4O60513 344 aa17.51■□□□□ 0.39
TREX1-201ENST00000433541 CCNE2O96020 404 aa17.51■□□□□ 0.39
TREX1-201ENST00000433541 SUPT20HL2P0C7V6 817 aa17.51■□□□□ 0.39
TREX1-201ENST00000433541 RAG1P15918 1043 aa17.51■□□□□ 0.39
TREX1-201ENST00000433541 U2AF2P26368 475 aaKnown RBP eCLIP17.51■□□□□ 0.39
TREX1-201ENST00000433541 CDK7P50613 346 aa17.51■□□□□ 0.39
TREX1-201ENST00000433541 STAT5BP51692 787 aa17.51■□□□□ 0.39
TREX1-201ENST00000433541 JAK3P52333 1124 aa17.51■□□□□ 0.39
TREX1-201ENST00000433541 ZNF174Q15697 407 aa17.51■□□□□ 0.39
TREX1-201ENST00000433541 SWSAP1Q6NVH7 229 aa17.51■□□□□ 0.39
TREX1-201ENST00000433541 FAM126BQ8IXS8 530 aa17.51■□□□□ 0.39
TREX1-201ENST00000433541 ETNPPLQ8TBG4 499 aa17.51■□□□□ 0.39
TREX1-201ENST00000433541 FAM20AQ96MK3 541 aa17.51■□□□□ 0.39
TREX1-201ENST00000433541 MBOAT7Q96N66 472 aa17.51■□□□□ 0.39
TREX1-201ENST00000433541 TOX2Q96NM4 488 aa17.51■□□□□ 0.39
TREX1-201ENST00000433541 ZNF302Q9NR11 478 aa17.51■□□□□ 0.39
TREX1-201ENST00000433541 PDLIM7Q9NR12 457 aa17.51■□□□□ 0.39
TREX1-201ENST00000433541 DISC1Q9NRI5 854 aa17.51■□□□□ 0.39
TREX1-201ENST00000433541 TRMT13Q9NUP7 481 aaKnown RBP17.51■□□□□ 0.39
TREX1-201ENST00000433541 HDAC6Q9UBN7 1215 aa17.51■□□□□ 0.39
TREX1-201ENST00000433541 PCDHA10Q9Y5I2 948 aa17.51■□□□□ 0.39
TREX1-201ENST00000433541 EMSYQ7Z589 1322 aa17.5■□□□□ 0.39
TREX1-201ENST00000433541 C17orf102A2RUQ5 167 aa17.5■□□□□ 0.39
TREX1-201ENST00000433541 TBX3O15119 743 aa17.5■□□□□ 0.39
TREX1-201ENST00000433541 SMIM10L2AP0DMW4 78 aa17.5■□□□□ 0.39
TREX1-201ENST00000433541 SMIM10L2BP0DMW5 78 aa17.5■□□□□ 0.39
TREX1-201ENST00000433541 SFNP31947 248 aa17.5■□□□□ 0.39
TREX1-201ENST00000433541 PTPN11Q06124 597 aaPredicted RBP17.5■□□□□ 0.39
TREX1-201ENST00000433541 FAAP100Q0VG06 881 aa17.5■□□□□ 0.39
TREX1-201ENST00000433541 PTGISQ16647 500 aa17.5■□□□□ 0.39
TREX1-201ENST00000433541 NCAPH2Q6IBW4 605 aa17.5■□□□□ 0.39
TREX1-201ENST00000433541 PDXDC2PQ6P474 469 aa17.5■□□□□ 0.39
TREX1-201ENST00000433541 FERMT3Q86UX7 667 aa17.5■□□□□ 0.39
TREX1-201ENST00000433541 SLC43A3Q8NBI5 491 aa17.5■□□□□ 0.39
TREX1-201ENST00000433541 TNPO1Q92973 898 aaKnown RBP17.5■□□□□ 0.39
TREX1-201ENST00000433541 PPP1R12CQ9BZL4 782 aa17.5■□□□□ 0.39
TREX1-201ENST00000433541 UNC45AQ9H3U1 944 aa17.5■□□□□ 0.39
TREX1-201ENST00000433541 HAS3O00219 553 aa17.49■□□□□ 0.39
TREX1-201ENST00000433541 PSMD10O75832 226 aa17.49■□□□□ 0.39
TREX1-201ENST00000433541 GNAT1P11488 350 aa17.49■□□□□ 0.39
TREX1-201ENST00000433541 SYT1P21579 422 aa17.49■□□□□ 0.39
TREX1-201ENST00000433541 TXKP42681 527 aa17.49■□□□□ 0.39
TREX1-201ENST00000433541 TRAPPC10P48553 1259 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms