RNA–Protein interactions for RNA: ENST00000433274.6

SF1-209, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-209ENST00000433274 EYA4O95677 639 aa16.85■□□□□ 0.29
SF1-209ENST00000433274 IREB2P48200 963 aaKnown RBP16.85■□□□□ 0.29
SF1-209ENST00000433274 MTMR1Q13613 665 aa16.85■□□□□ 0.29
SF1-209ENST00000433274 TREML2Q5T2D2 321 aa16.85■□□□□ 0.29
SF1-209ENST00000433274 USP50Q70EL3 339 aaPredicted RBP16.85■□□□□ 0.29
SF1-209ENST00000433274 MOB2Q70IA6 237 aa16.85■□□□□ 0.29
SF1-209ENST00000433274 MYOCDQ8IZQ8 938 aa16.85■□□□□ 0.29
SF1-209ENST00000433274 TC2NQ8N9U0 490 aa16.85■□□□□ 0.29
SF1-209ENST00000433274 CDCA5Q96FF9 252 aa16.85■□□□□ 0.29
SF1-209ENST00000433274 REEP2Q9BRK0 252 aa16.85■□□□□ 0.29
SF1-209ENST00000433274 R3HCC1Q9Y3T6 440 aaKnown RBP16.85■□□□□ 0.29
SF1-209ENST00000433274 COL11A1P12107 1806 aaPredicted RBP16.85■□□□□ 0.29
SF1-209ENST00000433274 UBXN1Q04323 297 aa16.84■□□□□ 0.29
SF1-209ENST00000433274 GIT2Q14161 759 aa16.84■□□□□ 0.29
SF1-209ENST00000433274 GPR162Q16538 588 aa16.84■□□□□ 0.29
SF1-209ENST00000433274 NIPA1Q7RTP0 329 aa16.84■□□□□ 0.29
SF1-209ENST00000433274 PPFIBP1Q86W92 1011 aa16.84■□□□□ 0.29
SF1-209ENST00000433274 CCDC112Q8NEF3 446 aa16.84■□□□□ 0.29
SF1-209ENST00000433274 CPLX3Q8WVH0 158 aa16.84■□□□□ 0.29
SF1-209ENST00000433274 CNOT6LQ96LI5 555 aaKnown RBP16.84■□□□□ 0.29
SF1-209ENST00000433274 PDCD2LQ9BRP1 358 aa16.84■□□□□ 0.29
SF1-209ENST00000433274 TEX13BQ9BXU2 312 aa16.84■□□□□ 0.29
SF1-209ENST00000433274 JADE2Q9NQC1 790 aa16.84■□□□□ 0.29
SF1-209ENST00000433274 TRMT1Q9NXH9 659 aaKnown RBP16.84■□□□□ 0.29
SF1-209ENST00000433274 RBBP6Q7Z6E9 1792 aaKnown RBP16.84■□□□□ 0.29
SF1-209ENST00000433274 ZBTB39O15060 712 aa16.84■□□□□ 0.29
SF1-209ENST00000433274 NF2P35240 595 aa16.84■□□□□ 0.29
SF1-209ENST00000433274 TTLL12Q14166 644 aaPredicted RBP16.84■□□□□ 0.29
SF1-209ENST00000433274 CEP135Q66GS9 1140 aa16.84■□□□□ 0.29
SF1-209ENST00000433274 B3GNT9Q6UX72 402 aa16.84■□□□□ 0.29
SF1-209ENST00000433274 FAM114A1Q8IWE2 563 aa16.84■□□□□ 0.29
SF1-209ENST00000433274 OTUD5Q96G74 571 aa16.84■□□□□ 0.29
SF1-209ENST00000433274 CLMNQ96JQ2 1002 aa16.84■□□□□ 0.29
SF1-209ENST00000433274 C16orf45Q96MC5 204 aaPredicted RBP16.84■□□□□ 0.29
SF1-209ENST00000433274 AGO4Q9HCK5 861 aaKnown RBP16.84■□□□□ 0.29
SF1-209ENST00000433274 PCDHA2Q9Y5H9 948 aa16.84■□□□□ 0.29
SF1-209ENST00000433274 HOXA7P31268 230 aaPredicted RBP16.83■□□□□ 0.28
SF1-209ENST00000433274 RBL2Q08999 1139 aa16.83■□□□□ 0.28
SF1-209ENST00000433274 ITGB3BPQ13352 177 aaPredicted RBP16.83■□□□□ 0.28
SF1-209ENST00000433274 EPHA7Q15375 998 aa16.83■□□□□ 0.28
SF1-209ENST00000433274 EAPPQ56P03 285 aaPredicted RBP16.83■□□□□ 0.28
SF1-209ENST00000433274 TUBGCP2Q9BSJ2 902 aa16.83■□□□□ 0.28
SF1-209ENST00000433274 RUSC1Q9BVN2 902 aa16.83■□□□□ 0.28
SF1-209ENST00000433274 TMX1Q9H3N1 280 aa16.83■□□□□ 0.28
SF1-209ENST00000433274 WRAP73Q9P2S5 460 aaPredicted RBP16.83■□□□□ 0.28
SF1-209ENST00000433274 FRMD3A2A2Y4 597 aa16.82■□□□□ 0.28
SF1-209ENST00000433274 AKR1B15C9JRZ8 316 aaPredicted RBP16.82■□□□□ 0.28
SF1-209ENST00000433274 IRF6O14896 467 aa16.82■□□□□ 0.28
SF1-209ENST00000433274 ATP2A1O14983 1001 aa16.82■□□□□ 0.28
SF1-209ENST00000433274 GADL1Q6ZQY3 521 aa16.82■□□□□ 0.28
SF1-209ENST00000433274 BANK1Q8NDB2 785 aa16.82■□□□□ 0.28
SF1-209ENST00000433274 POLD4Q9HCU8 107 aa16.82■□□□□ 0.28
SF1-209ENST00000433274 TESPA1A2RU30 521 aaPredicted RBP16.82■□□□□ 0.28
SF1-209ENST00000433274 LGALS16A8MUM7 142 aa16.82■□□□□ 0.28
SF1-209ENST00000433274 DHX15O43143 795 aaKnown RBP16.82■□□□□ 0.28
SF1-209ENST00000433274 MTIF2P46199 727 aaKnown RBP16.82■□□□□ 0.28
SF1-209ENST00000433274 LRRC63Q05C16 580 aa16.82■□□□□ 0.28
SF1-209ENST00000433274 E4F1Q66K89 784 aaPredicted RBP16.82■□□□□ 0.28
SF1-209ENST00000433274 MIER3Q7Z3K6 550 aa16.82■□□□□ 0.28
SF1-209ENST00000433274 NELFCDQ8IXH7 590 aa16.82■□□□□ 0.28
SF1-209ENST00000433274 CCAR2Q8N163 923 aaKnown RBP16.82■□□□□ 0.28
SF1-209ENST00000433274 KCTD17Q8N5Z5 321 aa16.82■□□□□ 0.28
SF1-209ENST00000433274 TSG101Q99816 390 aa16.82■□□□□ 0.28
SF1-209ENST00000433274 LXNQ9BS40 222 aa16.82■□□□□ 0.28
SF1-209ENST00000433274 ACAD9Q9H845 621 aa16.82■□□□□ 0.28
SF1-209ENST00000433274 ITIH6Q6UXX5 1313 aa16.82■□□□□ 0.28
SF1-209ENST00000433274 WDR90Q96KV7 1748 aa16.82■□□□□ 0.28
SF1-209ENST00000433274 RSPH10B2B2RC85 870 aa16.81■□□□□ 0.28
SF1-209ENST00000433274 B4DLN1 442 aa16.81■□□□□ 0.28
SF1-209ENST00000433274 PEX10O60683 326 aa16.81■□□□□ 0.28
SF1-209ENST00000433274 RSPH10BP0C881 870 aa16.81■□□□□ 0.28
SF1-209ENST00000433274 RINT1Q6NUQ1 792 aa16.81■□□□□ 0.28
SF1-209ENST00000433274 SFR1Q86XK3 245 aa16.81■□□□□ 0.28
SF1-209ENST00000433274 TMEM139Q8IV31 216 aa16.81■□□□□ 0.28
SF1-209ENST00000433274 ZC3H15Q8WU90 426 aaKnown RBP16.81■□□□□ 0.28
SF1-209ENST00000433274 BAG1Q99933 345 aaPredicted RBP16.81■□□□□ 0.28
SF1-209ENST00000433274 OTOFQ9HC10 1997 aa16.81■□□□□ 0.28
SF1-209ENST00000433274 MYPNQ86TC9 1320 aa16.81■□□□□ 0.28
SF1-209ENST00000433274 GLTPD2A6NH11 291 aa16.81■□□□□ 0.28
SF1-209ENST00000433274 GYPCP04921 128 aa16.81■□□□□ 0.28
SF1-209ENST00000433274 CASP14P31944 242 aa16.81■□□□□ 0.28
SF1-209ENST00000433274 ANKRD13AQ8IZ07 590 aa16.81■□□□□ 0.28
SF1-209ENST00000433274 MB21D1Q8N884 522 aa16.81■□□□□ 0.28
SF1-209ENST00000433274 NACC1Q96RE7 527 aa16.81■□□□□ 0.28
SF1-209ENST00000433274 A1CFQ9NQ94 594 aaKnown RBP16.81■□□□□ 0.28
SF1-209ENST00000433274 CYP39A1Q9NYL5 469 aa16.81■□□□□ 0.28
SF1-209ENST00000433274 SAMM50Q9Y512 469 aa16.81■□□□□ 0.28
SF1-209ENST00000433274 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.81■□□□□ 0.281e-8■□□□□ 11.3
SF1-209ENST00000433274 NKRFO15226 690 aaKnown RBP eCLIP16.8■□□□□ 0.288e-7■■■□□ 14.6
SF1-209ENST00000433274 TBCAO75347 108 aaKnown RBP16.8■□□□□ 0.28
SF1-209ENST00000433274 TPM2P07951 284 aa16.8■□□□□ 0.28
SF1-209ENST00000433274 NR3C2P08235 984 aa16.8■□□□□ 0.28
SF1-209ENST00000433274 SCFD1Q8WVM8 642 aa16.8■□□□□ 0.28
SF1-209ENST00000433274 ATP9AO75110 1047 aa16.8■□□□□ 0.28
SF1-209ENST00000433274 MUTP22033 750 aa16.8■□□□□ 0.28
SF1-209ENST00000433274 CCND2P30279 289 aa16.8■□□□□ 0.28
SF1-209ENST00000433274 FXR1P51114 621 aaKnown RBP eCLIP16.8■□□□□ 0.28
SF1-209ENST00000433274 CASP5P51878 434 aa16.8■□□□□ 0.28
SF1-209ENST00000433274 PPATQ06203 517 aa16.8■□□□□ 0.28
SF1-209ENST00000433274 ERO1BQ86YB8 467 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms