RNA–Protein interactions for RNA: ENST00000432725.1

SF1-208, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 475 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-208ENST00000432725 PGBD1Q96JS3 809 aa17.82■□□□□ 0.44
SF1-208ENST00000432725 ZMYND12Q9H0C1 365 aa17.82■□□□□ 0.44
SF1-208ENST00000432725 C6orf50Q9HD87 102 aa17.82■□□□□ 0.44
SF1-208ENST00000432725 TMEM63CQ9P1W3 806 aa17.82■□□□□ 0.44
SF1-208ENST00000432725 LAMA2P24043 3122 aaKnown RBP17.81■□□□□ 0.44
SF1-208ENST00000432725 RGS20O76081 388 aa17.81■□□□□ 0.44
SF1-208ENST00000432725 PTPN11Q06124 597 aaPredicted RBP17.81■□□□□ 0.44
SF1-208ENST00000432725 PGM5Q15124 567 aa17.81■□□□□ 0.44
SF1-208ENST00000432725 NBPF20Q3BBV1 942 aa17.81■□□□□ 0.44
SF1-208ENST00000432725 TMEM240Q5SV17 173 aa17.81■□□□□ 0.44
SF1-208ENST00000432725 L1TD1Q5T7N2 865 aaKnown RBP17.81■□□□□ 0.44
SF1-208ENST00000432725 RASIP1Q5U651 963 aa17.81■□□□□ 0.44
SF1-208ENST00000432725 WWC2Q6AWC2 1192 aa17.81■□□□□ 0.44
SF1-208ENST00000432725 IL23AQ9NPF7 189 aa17.81■□□□□ 0.44
SF1-208ENST00000432725 STXBP5LQ9Y2K9 1186 aa17.81■□□□□ 0.44
SF1-208ENST00000432725 CLIC4Q9Y696 253 aa17.81■□□□□ 0.44
SF1-208ENST00000432725 MRVI1Q9Y6F6 885 aa17.81■□□□□ 0.44
SF1-208ENST00000432725 UMODL1Q5DID0 1318 aa17.8■□□□□ 0.44
SF1-208ENST00000432725 hCG_1642624A0A1W2PR95 340 aa17.8■□□□□ 0.44
SF1-208ENST00000432725 MMP3P08254 477 aa17.8■□□□□ 0.44
SF1-208ENST00000432725 MYCLP12524 364 aaPredicted RBP17.8■□□□□ 0.44
SF1-208ENST00000432725 CEBPZQ03701 1054 aaKnown RBP17.8■□□□□ 0.44
SF1-208ENST00000432725 NR5A1Q13285 461 aa17.8■□□□□ 0.44
SF1-208ENST00000432725 LAMC2Q13753 1193 aa17.8■□□□□ 0.44
SF1-208ENST00000432725 PTPAQ15257 358 aa17.8■□□□□ 0.44
SF1-208ENST00000432725 PSRC1Q6PGN9 363 aaPredicted RBP17.8■□□□□ 0.44
SF1-208ENST00000432725 KCNV1Q6PIU1 500 aa17.8■□□□□ 0.44
SF1-208ENST00000432725 CCDC73Q6ZRK6 1079 aa17.8■□□□□ 0.44
SF1-208ENST00000432725 HEATR3Q7Z4Q2 680 aa17.8■□□□□ 0.44
SF1-208ENST00000432725 IL31RAQ8NI17 732 aa17.8■□□□□ 0.44
SF1-208ENST00000432725 TRMT13Q9NUP7 481 aaKnown RBP17.8■□□□□ 0.44
SF1-208ENST00000432725 PCDHA7Q9UN72 937 aa17.8■□□□□ 0.44
SF1-208ENST00000432725 FRMPD4Q14CM0 1322 aa17.79■□□□□ 0.44
SF1-208ENST00000432725 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.79■□□□□ 0.44
SF1-208ENST00000432725 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.79■□□□□ 0.44
SF1-208ENST00000432725 FSD2A1L4K1 749 aa17.79■□□□□ 0.44
SF1-208ENST00000432725 GOLGA6L3A6NEY3 463 aa17.79■□□□□ 0.44
SF1-208ENST00000432725 CUTAO60888 179 aa17.79■□□□□ 0.44
SF1-208ENST00000432725 TGFB3P10600 412 aa17.79■□□□□ 0.44
SF1-208ENST00000432725 CCND2P30279 289 aa17.79■□□□□ 0.44
SF1-208ENST00000432725 NAPAP54920 295 aa17.79■□□□□ 0.44
SF1-208ENST00000432725 ORC2Q13416 577 aaPredicted RBP17.79■□□□□ 0.44
SF1-208ENST00000432725 ZNF697Q5TEC3 545 aa17.79■□□□□ 0.44
SF1-208ENST00000432725 MCTP2Q6DN12 878 aa17.79■□□□□ 0.44
SF1-208ENST00000432725 ZNF365Q70YC5 407 aa17.79■□□□□ 0.44
SF1-208ENST00000432725 KRT25Q7Z3Z0 450 aa17.79■□□□□ 0.44
SF1-208ENST00000432725 FCHSD1Q86WN1 690 aa17.79■□□□□ 0.44
SF1-208ENST00000432725 OXER1Q8TDS5 423 aa17.79■□□□□ 0.44
SF1-208ENST00000432725 PIBF1Q8WXW3 757 aa17.79■□□□□ 0.44
SF1-208ENST00000432725 MRPS27Q92552 414 aaKnown RBP17.79■□□□□ 0.44
SF1-208ENST00000432725 GUCD1Q96NT3 240 aa17.79■□□□□ 0.44
SF1-208ENST00000432725 WNT8AQ9H1J5 351 aa17.79■□□□□ 0.44
SF1-208ENST00000432725 M0R2N6 131 aa17.78■□□□□ 0.44
SF1-208ENST00000432725 PIK3CDO00329 1044 aa17.78■□□□□ 0.44
SF1-208ENST00000432725 ACRP10323 421 aa17.78■□□□□ 0.44
SF1-208ENST00000432725 CMA1P23946 247 aa17.78■□□□□ 0.44
SF1-208ENST00000432725 TOB1P50616 345 aaPredicted RBP17.78■□□□□ 0.44
SF1-208ENST00000432725 FAM160A1Q05DH4 1040 aa17.78■□□□□ 0.44
SF1-208ENST00000432725 DGKDQ16760 1214 aa17.78■□□□□ 0.44
SF1-208ENST00000432725 FAM47CQ5HY64 1035 aa17.78■□□□□ 0.44
SF1-208ENST00000432725 LRSAM1Q6UWE0 723 aa17.78■□□□□ 0.44
SF1-208ENST00000432725 SESTD1Q86VW0 696 aa17.78■□□□□ 0.44
SF1-208ENST00000432725 ZNF579Q8NAF0 562 aaKnown RBP17.78■□□□□ 0.44
SF1-208ENST00000432725 PPTC7Q8NI37 304 aa17.78■□□□□ 0.44
SF1-208ENST00000432725 KAT2BQ92831 832 aa17.78■□□□□ 0.44
SF1-208ENST00000432725 FTOQ9C0B1 505 aaKnown RBP eCLIP17.78■□□□□ 0.44
SF1-208ENST00000432725 SEMA6BQ9H3T3 888 aa17.78■□□□□ 0.44
SF1-208ENST00000432725 BAZ2BQ9UIF8 2168 aaKnown RBP17.77■□□□□ 0.44
SF1-208ENST00000432725 TMEM265A0A087WTH1 108 aa17.77■□□□□ 0.44
SF1-208ENST00000432725 FAM237AA0A1B0GTK4 181 aa17.77■□□□□ 0.44
SF1-208ENST00000432725 CCDC194A0A1B0GVG4 234 aa17.77■□□□□ 0.44
SF1-208ENST00000432725 STAM2O75886 525 aa17.77■□□□□ 0.44
SF1-208ENST00000432725 CYP2C9P11712 490 aa17.77■□□□□ 0.44
SF1-208ENST00000432725 HOXD8P13378 290 aaPredicted RBP17.77■□□□□ 0.44
SF1-208ENST00000432725 CCL23P55773 120 aa17.77■□□□□ 0.44
SF1-208ENST00000432725 CELF3Q5SZQ8 465 aaKnown RBP17.77■□□□□ 0.44
SF1-208ENST00000432725 DHX37Q8IY37 1157 aaKnown RBP17.77■□□□□ 0.44
SF1-208ENST00000432725 KRI1Q8N9T8 703 aaKnown RBP17.77■□□□□ 0.44
SF1-208ENST00000432725 HERVK_113Q902F9 699 aa17.77■□□□□ 0.44
SF1-208ENST00000432725 GPKOWQ92917 476 aaPredicted RBP eCLIP17.77■□□□□ 0.443e-7■■□□□ 13
SF1-208ENST00000432725 NUP62CLQ9H1M0 184 aa17.77■□□□□ 0.44
SF1-208ENST00000432725 SMCO2A6NFE2 343 aa17.76■□□□□ 0.43
SF1-208ENST00000432725 MEIS2O14770 477 aa17.76■□□□□ 0.43
SF1-208ENST00000432725 FGBP02675 491 aa17.76■□□□□ 0.43
SF1-208ENST00000432725 SP2Q02086 613 aa17.76■□□□□ 0.43
SF1-208ENST00000432725 AXDND1Q5T1B0 1012 aaPredicted RBP17.76■□□□□ 0.43
SF1-208ENST00000432725 RPUSD2Q8IZ73 545 aaKnown RBP17.76■□□□□ 0.43
SF1-208ENST00000432725 VWCEQ96DN2 955 aa17.76■□□□□ 0.43
SF1-208ENST00000432725 FAM161BQ96MY7 647 aa17.76■□□□□ 0.43
SF1-208ENST00000432725 INPP4AQ96PE3 977 aaPredicted RBP17.76■□□□□ 0.43
SF1-208ENST00000432725 TTYH1Q9H313 450 aaPredicted RBP17.76■□□□□ 0.43
SF1-208ENST00000432725 SCN10AQ9Y5Y9 1956 aa17.75■□□□□ 0.43
SF1-208ENST00000432725 LAD1O00515 517 aa17.75■□□□□ 0.43
SF1-208ENST00000432725 PITPNM1O00562 1244 aa17.75■□□□□ 0.43
SF1-208ENST00000432725 KINO60870 393 aaKnown RBP17.75■□□□□ 0.43
SF1-208ENST00000432725 PPFIA4O75335 1185 aa17.75■□□□□ 0.43
SF1-208ENST00000432725 LIG1P18858 919 aa17.75■□□□□ 0.43
SF1-208ENST00000432725 UBA1P22314 1058 aaKnown RBP17.75■□□□□ 0.43
SF1-208ENST00000432725 ICAM3P32942 547 aa17.75■□□□□ 0.43
SF1-208ENST00000432725 MRE11P49959 708 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms