RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 RPAINQ86UA6 219 aa17.14■□□□□ 0.33
PRKDC-203ENST00000432581 TMEM192Q8IY95 271 aa17.14■□□□□ 0.33
PRKDC-203ENST00000432581 MB21D2Q8IYB1 491 aaPredicted RBP17.14■□□□□ 0.33
PRKDC-203ENST00000432581 GJD3Q8N144 294 aa17.14■□□□□ 0.33
PRKDC-203ENST00000432581 MTA3Q9BTC8 594 aa17.14■□□□□ 0.33
PRKDC-203ENST00000432581 SIP14410 1827 aa17.14■□□□□ 0.33
PRKDC-203ENST00000432581 RBAK-RBAKDNI3L0D1 243 aa17.13■□□□□ 0.33
PRKDC-203ENST00000432581 MEIS2O14770 477 aa17.13■□□□□ 0.33
PRKDC-203ENST00000432581 SGSM2O43147 1006 aa17.13■□□□□ 0.33
PRKDC-203ENST00000432581 SP4Q02446 784 aa17.13■□□□□ 0.33
PRKDC-203ENST00000432581 PTCRAQ6ISU1 281 aaPredicted RBP17.13■□□□□ 0.33
PRKDC-203ENST00000432581 CASC1Q6TDU7 716 aa17.13■□□□□ 0.33
PRKDC-203ENST00000432581 RSPH3Q86UC2 560 aa17.13■□□□□ 0.33
PRKDC-203ENST00000432581 ZNF654Q8IZM8 581 aa17.13■□□□□ 0.33
PRKDC-203ENST00000432581 BANK1Q8NDB2 785 aa17.13■□□□□ 0.33
PRKDC-203ENST00000432581 NEK9Q8TD19 979 aa17.13■□□□□ 0.33
PRKDC-203ENST00000432581 KHSRPQ92945 711 aaKnown RBP eCLIP17.13■□□□□ 0.33
PRKDC-203ENST00000432581 GPRASP2Q96D09 838 aa17.13■□□□□ 0.33
PRKDC-203ENST00000432581 IL17RAQ96F46 866 aa17.13■□□□□ 0.33
PRKDC-203ENST00000432581 OSBPL7Q9BZF2 842 aa17.13■□□□□ 0.33
PRKDC-203ENST00000432581 CD320Q9NPF0 282 aa17.13■□□□□ 0.33
PRKDC-203ENST00000432581 BAZ2BQ9UIF8 2168 aaKnown RBP17.12■□□□□ 0.33
PRKDC-203ENST00000432581 GRXCR2A6NFK2 248 aa17.12■□□□□ 0.33
PRKDC-203ENST00000432581 TCF7P36402 384 aaPredicted RBP17.12■□□□□ 0.33
PRKDC-203ENST00000432581 TMTC2Q8N394 836 aa17.12■□□□□ 0.33
PRKDC-203ENST00000432581 FIBCD1Q8N539 461 aa17.12■□□□□ 0.33
PRKDC-203ENST00000432581 MAP4K1Q92918 833 aa17.12■□□□□ 0.33
PRKDC-203ENST00000432581 PABPC5Q96DU9 382 aaKnown RBP17.12■□□□□ 0.33
PRKDC-203ENST00000432581 YTHDC1Q96MU7 727 aaKnown RBP17.12■□□□□ 0.33
PRKDC-203ENST00000432581 NSUN3Q9H649 340 aaKnown RBP17.12■□□□□ 0.33
PRKDC-203ENST00000432581 LY9Q9HBG7 655 aa17.12■□□□□ 0.33
PRKDC-203ENST00000432581 C11orf16Q9NQ32 467 aa17.12■□□□□ 0.33
PRKDC-203ENST00000432581 FAM50BQ9Y247 325 aa17.12■□□□□ 0.33
PRKDC-203ENST00000432581 RWDD3Q9Y3V2 267 aa17.12■□□□□ 0.33
PRKDC-203ENST00000432581 MICAL3Q7RTP6 2002 aa17.12■□□□□ 0.33
PRKDC-203ENST00000432581 CHRNA1P02708 482 aa17.11■□□□□ 0.33
PRKDC-203ENST00000432581 RB1P06400 928 aa17.11■□□□□ 0.33
PRKDC-203ENST00000432581 IL9P15248 144 aa17.11■□□□□ 0.33
PRKDC-203ENST00000432581 SSTR3P32745 418 aaPredicted RBP17.11■□□□□ 0.33
PRKDC-203ENST00000432581 PPFIA1Q13136 1202 aa17.11■□□□□ 0.33
PRKDC-203ENST00000432581 TCEAL5Q5H9L2 206 aa17.11■□□□□ 0.33
PRKDC-203ENST00000432581 SEPT1Q8WYJ6 367 aa17.11■□□□□ 0.33
PRKDC-203ENST00000432581 MYL10Q9BUA6 226 aa17.11■□□□□ 0.33
PRKDC-203ENST00000432581 PSTPIP2Q9H939 334 aa17.11■□□□□ 0.33
PRKDC-203ENST00000432581 ERAP1Q9NZ08 941 aa17.11■□□□□ 0.33
PRKDC-203ENST00000432581 TELO2Q9Y4R8 837 aa17.11■□□□□ 0.33
PRKDC-203ENST00000432581 FAM86C2PA6NEL3 165 aa17.1■□□□□ 0.33
PRKDC-203ENST00000432581 C5orf67F2Z3F1 127 aa17.1■□□□□ 0.33
PRKDC-203ENST00000432581 NCK2O43639 380 aa17.1■□□□□ 0.33
PRKDC-203ENST00000432581 RPLP2P05387 115 aaKnown RBP17.1■□□□□ 0.33
PRKDC-203ENST00000432581 GHRP10912 638 aa17.1■□□□□ 0.33
PRKDC-203ENST00000432581 KCNA2P16389 499 aa17.1■□□□□ 0.33
PRKDC-203ENST00000432581 COL19A1Q14993 1142 aa17.1■□□□□ 0.33
PRKDC-203ENST00000432581 NFXL1Q6ZNB6 911 aa17.1■□□□□ 0.33
PRKDC-203ENST00000432581 C11orf84Q9BUA3 381 aaPredicted RBP17.1■□□□□ 0.33
PRKDC-203ENST00000432581 EHMT1Q9H9B1 1298 aa17.1■□□□□ 0.33
PRKDC-203ENST00000432581 TUBE1Q9UJT0 475 aa17.1■□□□□ 0.33
PRKDC-203ENST00000432581 RBM8AQ9Y5S9 174 aaKnown RBP17.1■□□□□ 0.33
PRKDC-203ENST00000432581 MBLAC1A4D2B0 266 aaPredicted RBP17.09■□□□□ 0.33
PRKDC-203ENST00000432581 CCDC69A6NI79 296 aa17.09■□□□□ 0.33
PRKDC-203ENST00000432581 H3BQ06 376 aaPredicted RBP17.09■□□□□ 0.33
PRKDC-203ENST00000432581 PRC1O43663 620 aa17.09■□□□□ 0.33
PRKDC-203ENST00000432581 CALM1P0DP23 149 aa17.09■□□□□ 0.33
PRKDC-203ENST00000432581 CALM2P0DP24 149 aa17.09■□□□□ 0.33
PRKDC-203ENST00000432581 CALM3P0DP25 149 aa17.09■□□□□ 0.33
PRKDC-203ENST00000432581 ALADP13716 330 aa17.09■□□□□ 0.33
PRKDC-203ENST00000432581 HOXD11P31277 338 aaPredicted RBP17.09■□□□□ 0.33
PRKDC-203ENST00000432581 MCM5P33992 734 aa17.09■□□□□ 0.33
PRKDC-203ENST00000432581 CTNNB1P35222 781 aa17.09■□□□□ 0.33
PRKDC-203ENST00000432581 MGAT3Q09327 533 aa17.09■□□□□ 0.33
PRKDC-203ENST00000432581 GRIK4Q16099 956 aa17.09■□□□□ 0.33
PRKDC-203ENST00000432581 RUFY4Q6ZNE9 571 aa17.09■□□□□ 0.33
PRKDC-203ENST00000432581 SRBD1Q8N5C6 995 aaKnown RBP17.09■□□□□ 0.33
PRKDC-203ENST00000432581 TMEM87BQ96K49 555 aa17.09■□□□□ 0.33
PRKDC-203ENST00000432581 LMAN2LQ9H0V9 348 aa17.09■□□□□ 0.33
PRKDC-203ENST00000432581 SMARCAD1Q9H4L7 1026 aa17.09■□□□□ 0.33
PRKDC-203ENST00000432581 ADGRA3Q8IWK6 1321 aa17.08■□□□□ 0.32
PRKDC-203ENST00000432581 GSTTP1A0A1W2PQM5 241 aa17.08■□□□□ 0.32
PRKDC-203ENST00000432581 SPDYE3A6NKU9 549 aa17.08■□□□□ 0.32
PRKDC-203ENST00000432581 PRR33A8MZF0 331 aa17.08■□□□□ 0.32
PRKDC-203ENST00000432581 SH2B2O14492 632 aaPredicted RBP17.08■□□□□ 0.32
PRKDC-203ENST00000432581 MAFGO15525 162 aa17.08■□□□□ 0.32
PRKDC-203ENST00000432581 ATP9AO75110 1047 aa17.08■□□□□ 0.32
PRKDC-203ENST00000432581 PLEKHA8P1O95397 391 aa17.08■□□□□ 0.32
PRKDC-203ENST00000432581 ITGB5P18084 799 aa17.08■□□□□ 0.32
PRKDC-203ENST00000432581 BMPR1AP36894 532 aa17.08■□□□□ 0.32
PRKDC-203ENST00000432581 MTMR1Q13613 665 aa17.08■□□□□ 0.32
PRKDC-203ENST00000432581 LPIN1Q14693 890 aa17.08■□□□□ 0.32
PRKDC-203ENST00000432581 EP400NLQ6ZTU2 488 aa17.08■□□□□ 0.32
PRKDC-203ENST00000432581 GLG1Q92896 1179 aa17.08■□□□□ 0.32
PRKDC-203ENST00000432581 PRKAG3Q9UGI9 489 aa17.08■□□□□ 0.32
PRKDC-203ENST00000432581 SUPT16HQ9Y5B9 1047 aaKnown RBP17.08■□□□□ 0.32
PRKDC-203ENST00000432581 UBIAD1Q9Y5Z9 338 aa17.08■□□□□ 0.32
PRKDC-203ENST00000432581 RRN3P2A6NIE6 340 aa17.07■□□□□ 0.32
PRKDC-203ENST00000432581 MARK3P27448 753 aa17.07■□□□□ 0.32
PRKDC-203ENST00000432581 LIFRP42702 1097 aa17.07■□□□□ 0.32
PRKDC-203ENST00000432581 FBXO47Q5MNV8 452 aa17.07■□□□□ 0.32
PRKDC-203ENST00000432581 TSHZ1Q6ZSZ6 1077 aa17.07■□□□□ 0.32
PRKDC-203ENST00000432581 TNPO1Q92973 898 aaKnown RBP17.07■□□□□ 0.32
PRKDC-203ENST00000432581 CLP1Q92989 425 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms