RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 PKP1Q13835 747 aa16.27■□□□□ 0.2
CSTF3-202ENST00000431742 SNX17Q15036 470 aa16.27■□□□□ 0.2
CSTF3-202ENST00000431742 ZNF746Q6NUN9 644 aaPredicted RBP16.27■□□□□ 0.2
CSTF3-202ENST00000431742 KAT2BQ92831 832 aa16.27■□□□□ 0.2
CSTF3-202ENST00000431742 MTMR9Q96QG7 549 aa16.27■□□□□ 0.2
CSTF3-202ENST00000431742 C16orf70Q9BSU1 422 aa16.27■□□□□ 0.2
CSTF3-202ENST00000431742 MTG1Q9BT17 334 aaPredicted RBP16.27■□□□□ 0.2
CSTF3-202ENST00000431742 TMEM60Q9H2L4 133 aa16.27■□□□□ 0.2
CSTF3-202ENST00000431742 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.27■□□□□ 0.2
CSTF3-202ENST00000431742 VAV3Q9UKW4 847 aa16.27■□□□□ 0.2
CSTF3-202ENST00000431742 PCDHB6Q9Y5E3 794 aa16.27■□□□□ 0.2
CSTF3-202ENST00000431742 TCHHQ07283 1943 aa16.27■□□□□ 0.19
CSTF3-202ENST00000431742 EMSYQ7Z589 1322 aa16.26■□□□□ 0.19
CSTF3-202ENST00000431742 DDX39AO00148 427 aaKnown RBP16.26■□□□□ 0.19
CSTF3-202ENST00000431742 LGALS2P05162 132 aa16.26■□□□□ 0.19
CSTF3-202ENST00000431742 ZNF286BP0CG31 522 aa16.26■□□□□ 0.19
CSTF3-202ENST00000431742 ZSCAN22P10073 491 aaPredicted RBP16.26■□□□□ 0.19
CSTF3-202ENST00000431742 DDIT3P35638 169 aa16.26■□□□□ 0.19
CSTF3-202ENST00000431742 TCF7P36402 384 aaPredicted RBP16.26■□□□□ 0.19
CSTF3-202ENST00000431742 ANP32AP39687 249 aaKnown RBP16.26■□□□□ 0.19
CSTF3-202ENST00000431742 RGS19P49795 217 aa16.26■□□□□ 0.19
CSTF3-202ENST00000431742 ZNF174Q15697 407 aa16.26■□□□□ 0.19
CSTF3-202ENST00000431742 CALCRLQ16602 461 aa16.26■□□□□ 0.19
CSTF3-202ENST00000431742 SLFN12Q8IYM2 578 aa16.26■□□□□ 0.19
CSTF3-202ENST00000431742 C4orf32Q8N8J7 132 aa16.26■□□□□ 0.19
CSTF3-202ENST00000431742 SEPT1Q8WYJ6 367 aa16.26■□□□□ 0.19
CSTF3-202ENST00000431742 FERMT2Q96AC1 680 aa16.26■□□□□ 0.19
CSTF3-202ENST00000431742 GLT1D1Q96MS3 346 aa16.26■□□□□ 0.19
CSTF3-202ENST00000431742 TEKT3Q9BXF9 490 aa16.26■□□□□ 0.19
CSTF3-202ENST00000431742 SENP6Q9GZR1 1112 aaPredicted RBP16.26■□□□□ 0.19
CSTF3-202ENST00000431742 UNC45AQ9H3U1 944 aa16.26■□□□□ 0.19
CSTF3-202ENST00000431742 ZSCAN16Q9H4T2 348 aaPredicted RBP16.26■□□□□ 0.19
CSTF3-202ENST00000431742 TSHZ2Q9NRE2 1034 aa16.26■□□□□ 0.19
CSTF3-202ENST00000431742 TNRC18O15417 2968 aaPredicted RBP16.26■□□□□ 0.19
CSTF3-202ENST00000431742 GRIN2DO15399 1336 aa16.25■□□□□ 0.19
CSTF3-202ENST00000431742 IGKV6D-21A0A0A0MT36 114 aa16.25■□□□□ 0.19
CSTF3-202ENST00000431742 HAS3O00219 553 aa16.25■□□□□ 0.19
CSTF3-202ENST00000431742 LGR5O75473 907 aa16.25■□□□□ 0.19
CSTF3-202ENST00000431742 SPIRE1Q08AE8 756 aa16.25■□□□□ 0.19
CSTF3-202ENST00000431742 PPP2R5CQ13362 524 aa16.25■□□□□ 0.19
CSTF3-202ENST00000431742 C1orf53Q5VUE5 145 aa16.25■□□□□ 0.19
CSTF3-202ENST00000431742 ABHD15Q6UXT9 468 aa16.25■□□□□ 0.19
CSTF3-202ENST00000431742 SMAP1Q8IYB5 467 aaPredicted RBP16.25■□□□□ 0.19
CSTF3-202ENST00000431742 SLC43A3Q8NBI5 491 aa16.25■□□□□ 0.19
CSTF3-202ENST00000431742 PCYT2Q99447 389 aa16.25■□□□□ 0.19
CSTF3-202ENST00000431742 STARD7Q9NQZ5 370 aa16.25■□□□□ 0.19
CSTF3-202ENST00000431742 LOXHD1Q8IVV2 1947 aa16.24■□□□□ 0.19
CSTF3-202ENST00000431742 OR52Z1P0C646 297 aa16.24■□□□□ 0.19
CSTF3-202ENST00000431742 SUPT20HL2P0C7V6 817 aa16.24■□□□□ 0.19
CSTF3-202ENST00000431742 TRIM50Q86XT4 487 aa16.24■□□□□ 0.19
CSTF3-202ENST00000431742 RDM1Q8NG50 284 aa16.24■□□□□ 0.19
CSTF3-202ENST00000431742 A0A0U1RQG5 324 aaPredicted RBP16.23■□□□□ 0.19
CSTF3-202ENST00000431742 WDR64B1ANS9 1081 aa16.23■□□□□ 0.19
CSTF3-202ENST00000431742 BAG4O95429 457 aaKnown RBP16.23■□□□□ 0.19
CSTF3-202ENST00000431742 BRD1O95696 1058 aa16.23■□□□□ 0.19
CSTF3-202ENST00000431742 F13A1P00488 732 aa16.23■□□□□ 0.19
CSTF3-202ENST00000431742 SFNP31947 248 aa16.23■□□□□ 0.19
CSTF3-202ENST00000431742 CDK7P50613 346 aa16.23■□□□□ 0.19
CSTF3-202ENST00000431742 JAK3P52333 1124 aa16.23■□□□□ 0.19
CSTF3-202ENST00000431742 PSMC6P62333 389 aa16.23■□□□□ 0.19
CSTF3-202ENST00000431742 ATP2C1P98194 919 aaPredicted RBP16.23■□□□□ 0.19
CSTF3-202ENST00000431742 PTGDRQ13258 359 aa16.23■□□□□ 0.19
CSTF3-202ENST00000431742 FAM173BQ6P4H8 233 aa16.23■□□□□ 0.19
CSTF3-202ENST00000431742 SLC39A5Q6ZMH5 540 aa16.23■□□□□ 0.19
CSTF3-202ENST00000431742 CCDC60Q8IWA6 550 aaPredicted RBP16.23■□□□□ 0.19
CSTF3-202ENST00000431742 AFAP1L1Q8TED9 768 aa16.23■□□□□ 0.19
CSTF3-202ENST00000431742 KATNAL1Q9BW62 490 aa16.23■□□□□ 0.19
CSTF3-202ENST00000431742 TCEAL9Q9UHQ7 104 aa16.23■□□□□ 0.19
CSTF3-202ENST00000431742 ZDHHC9Q9Y397 364 aa16.23■□□□□ 0.19
CSTF3-202ENST00000431742 PCDHA10Q9Y5I2 948 aa16.23■□□□□ 0.19
CSTF3-202ENST00000431742 LTBP2Q14767 1821 aa16.23■□□□□ 0.19
CSTF3-202ENST00000431742 IGSF9BQ9UPX0 1349 aa16.22■□□□□ 0.19
CSTF3-202ENST00000431742 PDE4DIPQ5VU43 2346 aa16.22■□□□□ 0.19
CSTF3-202ENST00000431742 H3BRB1 525 aa16.22■□□□□ 0.19
CSTF3-202ENST00000431742 LAD1O00515 517 aa16.22■□□□□ 0.19
CSTF3-202ENST00000431742 PRPHP41219 470 aa16.22■□□□□ 0.19
CSTF3-202ENST00000431742 PSEN2P49810 448 aa16.22■□□□□ 0.19
CSTF3-202ENST00000431742 ITGA7Q13683 1181 aa16.22■□□□□ 0.19
CSTF3-202ENST00000431742 MFSD10Q14728 455 aa16.22■□□□□ 0.19
CSTF3-202ENST00000431742 LRRC26Q2I0M4 334 aa16.22■□□□□ 0.19
CSTF3-202ENST00000431742 UTP14CQ5TAP6 766 aaKnown RBP16.22■□□□□ 0.19
CSTF3-202ENST00000431742 MIS18BP1Q6P0N0 1132 aa16.22■□□□□ 0.19
CSTF3-202ENST00000431742 SESTD1Q86VW0 696 aa16.22■□□□□ 0.19
CSTF3-202ENST00000431742 SEZ6LQ9BYH1 1024 aa16.22■□□□□ 0.19
CSTF3-202ENST00000431742 TUT1Q9H6E5 874 aaKnown RBP16.22■□□□□ 0.19
CSTF3-202ENST00000431742 TTC12Q9H892 705 aaPredicted RBP16.22■□□□□ 0.19
CSTF3-202ENST00000431742 DISC1Q9NRI5 854 aa16.22■□□□□ 0.19
CSTF3-202ENST00000431742 ZNF215Q9UL58 517 aaPredicted RBP16.22■□□□□ 0.19
CSTF3-202ENST00000431742 PCDHA12Q9UN75 941 aa16.22■□□□□ 0.19
CSTF3-202ENST00000431742 RBM19Q9Y4C8 960 aaKnown RBP16.22■□□□□ 0.19
CSTF3-202ENST00000431742 TANC1Q9C0D5 1861 aa16.22■□□□□ 0.19
CSTF3-202ENST00000431742 ARVCFO00192 962 aa16.21■□□□□ 0.19
CSTF3-202ENST00000431742 EML1O00423 815 aa16.21■□□□□ 0.19
CSTF3-202ENST00000431742 CHMP2AO43633 222 aa16.21■□□□□ 0.19
CSTF3-202ENST00000431742 MARCH6O60337 910 aa16.21■□□□□ 0.19
CSTF3-202ENST00000431742 PSAPP07602 524 aa16.21■□□□□ 0.19
CSTF3-202ENST00000431742 TXKP42681 527 aa16.21■□□□□ 0.19
CSTF3-202ENST00000431742 ATN1P54259 1190 aaPredicted RBP16.21■□□□□ 0.19
CSTF3-202ENST00000431742 KIAA0753Q2KHM9 967 aa16.21■□□□□ 0.19
CSTF3-202ENST00000431742 NBPF20Q3BBV1 942 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms