RNA–Protein interactions for RNA: ENST00000429921.5

RPE-206, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-206ENST00000429921 CCDC40Q4G0X9 1142 aa11.23□□□□□ -0.61
RPE-206ENST00000429921 ZC2HC1CQ53FD0 456 aaPredicted RBP11.23□□□□□ -0.61
RPE-206ENST00000429921 OTOP1Q7RTM1 612 aa11.23□□□□□ -0.61
RPE-206ENST00000429921 ATG4CQ96DT6 458 aa11.23□□□□□ -0.61
RPE-206ENST00000429921 TAAR1Q96RJ0 339 aa11.23□□□□□ -0.61
RPE-206ENST00000429921 NT5C3AQ9H0P0 336 aa11.23□□□□□ -0.61
RPE-206ENST00000429921 GLT8D2Q9H1C3 349 aa11.23□□□□□ -0.61
RPE-206ENST00000429921 NLRC4Q9NPP4 1024 aa11.23□□□□□ -0.61
RPE-206ENST00000429921 KCND1Q9NSA2 647 aa11.23□□□□□ -0.61
RPE-206ENST00000429921 FEM1BQ9UK73 627 aa11.23□□□□□ -0.61
RPE-206ENST00000429921 MRPL11Q9Y3B7 192 aaKnown RBP11.23□□□□□ -0.61
RPE-206ENST00000429921 TELO2Q9Y4R8 837 aa11.23□□□□□ -0.61
RPE-206ENST00000429921 ITGB5P18084 799 aa11.23□□□□□ -0.61
RPE-206ENST00000429921 VCAM1P19320 739 aa11.23□□□□□ -0.61
RPE-206ENST00000429921 NMT1P30419 496 aaKnown RBP11.23□□□□□ -0.61
RPE-206ENST00000429921 PTGER2P43116 358 aa11.23□□□□□ -0.61
RPE-206ENST00000429921 HMGCS2P54868 508 aa11.23□□□□□ -0.61
RPE-206ENST00000429921 EHHADHQ08426 723 aa11.23□□□□□ -0.61
RPE-206ENST00000429921 LRRC55Q6ZSA7 311 aa11.23□□□□□ -0.61
RPE-206ENST00000429921 KRT26Q7Z3Y9 468 aa11.23□□□□□ -0.61
RPE-206ENST00000429921 CCDC65Q8IXS2 484 aa11.23□□□□□ -0.61
RPE-206ENST00000429921 GUF1Q8N442 669 aaKnown RBP11.23□□□□□ -0.61
RPE-206ENST00000429921 GUCA1BQ9UMX6 200 aa11.23□□□□□ -0.61
RPE-206ENST00000429921 REXO2Q9Y3B8 237 aaKnown RBP11.23□□□□□ -0.61
RPE-206ENST00000429921 PCDHA2Q9Y5H9 948 aa11.23□□□□□ -0.61
RPE-206ENST00000429921 ZHX2Q9Y6X8 837 aa11.23□□□□□ -0.61
RPE-206ENST00000429921 RPA1P27694 616 aa11.22□□□□□ -0.61
RPE-206ENST00000429921 DNM2P50570 870 aa11.22□□□□□ -0.61
RPE-206ENST00000429921 HIRAP54198 1017 aaPredicted RBP11.22□□□□□ -0.61
RPE-206ENST00000429921 ZNF280AP59817 542 aaPredicted RBP11.22□□□□□ -0.61
RPE-206ENST00000429921 SP4Q02446 784 aa11.22□□□□□ -0.61
RPE-206ENST00000429921 VWA3BQ502W6 1294 aa11.22□□□□□ -0.61
RPE-206ENST00000429921 CLEC4DQ8WXI8 215 aa11.22□□□□□ -0.61
RPE-206ENST00000429921 NDST4Q9H3R1 872 aa11.22□□□□□ -0.61
RPE-206ENST00000429921 SAMM50Q9Y512 469 aa11.22□□□□□ -0.61
RPE-206ENST00000429921 CTDP1Q9Y5B0 961 aaPredicted RBP11.22□□□□□ -0.61
RPE-206ENST00000429921 DUSP10Q9Y6W6 482 aa11.22□□□□□ -0.61
RPE-206ENST00000429921 ITIH6Q6UXX5 1313 aa11.22□□□□□ -0.61
RPE-206ENST00000429921 KDM3AQ9Y4C1 1321 aa11.22□□□□□ -0.61
RPE-206ENST00000429921 SLU7O95391 586 aaKnown RBP11.22□□□□□ -0.61
RPE-206ENST00000429921 HOXD13P35453 343 aa11.22□□□□□ -0.61
RPE-206ENST00000429921 ARID5AQ03989 594 aa11.22□□□□□ -0.61
RPE-206ENST00000429921 COG2Q14746 738 aa11.22□□□□□ -0.61
RPE-206ENST00000429921 CEP55Q53EZ4 464 aa11.22□□□□□ -0.61
RPE-206ENST00000429921 HYIQ5T013 277 aa11.22□□□□□ -0.61
RPE-206ENST00000429921 FKBP1CQ5VVH2 108 aa11.22□□□□□ -0.61
RPE-206ENST00000429921 OR8K1Q8NGG5 319 aa11.22□□□□□ -0.61
RPE-206ENST00000429921 ERMNQ8TAM6 284 aa11.22□□□□□ -0.61
RPE-206ENST00000429921 NOC3LQ8WTT2 800 aaKnown RBP11.22□□□□□ -0.61
RPE-206ENST00000429921 GGA3Q9NZ52 723 aa11.22□□□□□ -0.61
RPE-206ENST00000429921 RABGAP1Q9Y3P9 1069 aa11.22□□□□□ -0.61
RPE-206ENST00000429921 FER1L6Q2WGJ9 1857 aa11.21□□□□□ -0.61
RPE-206ENST00000429921 RCCD1A6NED2 376 aa11.21□□□□□ -0.61
RPE-206ENST00000429921 PIK3CDO00329 1044 aa11.21□□□□□ -0.61
RPE-206ENST00000429921 PSMD10O75832 226 aa11.21□□□□□ -0.61
RPE-206ENST00000429921 GCNT3O95395 438 aa11.21□□□□□ -0.61
RPE-206ENST00000429921 CIITAP33076 1130 aa11.21□□□□□ -0.61
RPE-206ENST00000429921 KCNJ6P48051 423 aa11.21□□□□□ -0.61
RPE-206ENST00000429921 HAUS3Q68CZ6 603 aa11.21□□□□□ -0.61
RPE-206ENST00000429921 CYP26C1Q6V0L0 522 aa11.21□□□□□ -0.61
RPE-206ENST00000429921 DNAAF5Q86Y56 855 aa11.21□□□□□ -0.61
RPE-206ENST00000429921 SLC35F6Q8N357 371 aa11.21□□□□□ -0.61
RPE-206ENST00000429921 PRPF38AQ8NAV1 312 aaKnown RBP11.21□□□□□ -0.61
RPE-206ENST00000429921 FAM20AQ96MK3 541 aa11.21□□□□□ -0.61
RPE-206ENST00000429921 NAP1L4Q99733 375 aaKnown RBP11.21□□□□□ -0.61
RPE-206ENST00000429921 SH2D4AQ9H788 454 aa11.21□□□□□ -0.61
RPE-206ENST00000429921 PUF60Q9UHX1 559 aaKnown RBP11.21□□□□□ -0.61
RPE-206ENST00000429921 COL2A1P02458 1487 aaPredicted RBP11.21□□□□□ -0.62
RPE-206ENST00000429921 IPO5O00410 1097 aaKnown RBP11.2□□□□□ -0.62
RPE-206ENST00000429921 ENC1O14682 589 aa11.2□□□□□ -0.62
RPE-206ENST00000429921 DDNO94850 711 aaPredicted RBP11.2□□□□□ -0.62
RPE-206ENST00000429921 ICAM1P05362 532 aa11.2□□□□□ -0.62
RPE-206ENST00000429921 CASP4P49662 377 aa11.2□□□□□ -0.62
RPE-206ENST00000429921 RPS6P62753 249 aaKnown RBP11.2□□□□□ -0.62
RPE-206ENST00000429921 ADAM9Q13443 819 aa11.2□□□□□ -0.62
RPE-206ENST00000429921 FKBP15Q5T1M5 1219 aa11.2□□□□□ -0.62
RPE-206ENST00000429921 RINT1Q6NUQ1 792 aa11.2□□□□□ -0.62
RPE-206ENST00000429921 RRAGAQ7L523 313 aa11.2□□□□□ -0.62
RPE-206ENST00000429921 FAM160B2Q86V87 743 aa11.2□□□□□ -0.62
RPE-206ENST00000429921 PDCL2Q8N4E4 241 aa11.2□□□□□ -0.62
RPE-206ENST00000429921 MYCT1Q8N699 235 aa11.2□□□□□ -0.62
RPE-206ENST00000429921 SYT2Q8N9I0 419 aaPredicted RBP11.2□□□□□ -0.62
RPE-206ENST00000429921 TSG101Q99816 390 aa11.2□□□□□ -0.62
RPE-206ENST00000429921 CAPN11Q9UMQ6 739 aa11.2□□□□□ -0.62
RPE-206ENST00000429921 EPN1Q9Y6I3 576 aaPredicted RBP11.2□□□□□ -0.62
RPE-206ENST00000429921 ATAD5Q96QE3 1844 aa11.2□□□□□ -0.62
RPE-206ENST00000429921 FZD9O00144 591 aa11.2□□□□□ -0.62
RPE-206ENST00000429921 ATP9AO75110 1047 aa11.2□□□□□ -0.62
RPE-206ENST00000429921 CYP3A4P08684 503 aa11.2□□□□□ -0.62
RPE-206ENST00000429921 ACTN1P12814 892 aa11.2□□□□□ -0.62
RPE-206ENST00000429921 MRPS9P82933 396 aaKnown RBP11.2□□□□□ -0.62
RPE-206ENST00000429921 KCNMA1Q12791 1236 aa11.2□□□□□ -0.62
RPE-206ENST00000429921 ARHGAP29Q52LW3 1261 aa11.2□□□□□ -0.62
RPE-206ENST00000429921 FAM114A1Q8IWE2 563 aa11.2□□□□□ -0.62
RPE-206ENST00000429921 SGIP1Q9BQI5 828 aa11.2□□□□□ -0.62
RPE-206ENST00000429921 KCNH7Q9NS40 1196 aa11.2□□□□□ -0.62
RPE-206ENST00000429921 TESPA1A2RU30 521 aaPredicted RBP11.19□□□□□ -0.62
RPE-206ENST00000429921 RBAK-RBAKDNI3L0D1 243 aa11.19□□□□□ -0.62
RPE-206ENST00000429921 CCP110O43303 1012 aa11.19□□□□□ -0.62
RPE-206ENST00000429921 NDUFA10O95299 355 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms