RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 A8MXQ7 604 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 AGTP01019 485 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 PFKFB1P16118 471 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 MDH1P40925 334 aaKnown RBP8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 GNAQP50148 359 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 SLF2Q8IX21 1173 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 CEP19Q96LK0 163 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 STOML2Q9UJZ1 356 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 BLOC1S6Q9UL45 172 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 MAPK8IP1Q9UQF2 711 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 EXOC5O00471 708 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 DNAL1Q4LDG9 190 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 WASHC2DQ5SRD0 308 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 IP6K1Q92551 441 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 LRRC59Q96AG4 307 aaKnown RBP8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 PCDH18Q9HCL0 1135 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 PENKP01210 267 aaPredicted RBP8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 ADSLP30566 484 aaPredicted RBP8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 SPTY2D1Q68D10 685 aaPredicted RBP8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 MINDY2Q8NBR6 621 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 SCFD1Q8WVM8 642 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 SLC40A1Q9NP59 571 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 SOS2Q07890 1332 aaPredicted RBP8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 CCNT1O60563 726 aaKnown RBP8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 ZPR1O75312 459 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 GNAT1P11488 350 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 RPL13P26373 211 aaKnown RBP8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 EIF2B5Q13144 721 aaKnown RBP8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 PRR16Q569H4 304 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 SAMD3Q8N6K7 520 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 SUCLG2Q96I99 432 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 FMO2Q99518 471 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 ABCB6Q9NP58 842 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 UBN1Q9NPG3 1134 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 HAUS2Q9NVX0 235 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 ATP10DQ9P241 1426 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 PRR23AA6NEV1 266 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 PODXLO00592 558 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 ADCY3O60266 1144 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 KRT9P35527 623 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 TRAPPC10P48553 1259 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 RCN1Q15293 331 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 SHQ1Q6PI26 577 aaKnown RBP8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 HS2ST1Q7LGA3 356 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 PEX5LQ8IYB4 626 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 RIBC1Q8N443 379 aaPredicted RBP8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 CAVIN3Q969G5 261 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 NAP1L4Q99733 375 aaKnown RBP8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 KCNQ3O43525 872 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 MTTPP55157 894 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 TRIM60Q495X7 471 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 DESI2Q9BSY9 194 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 L1RE1Q9UN81 338 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 WDR91A4D1P6 747 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 GUCY1B2O75343 617 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 CCZ1BP86790 482 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 CCZ1P86791 482 aaPredicted RBP8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 HAUS7Q99871 368 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 EPS8L2Q9H6S3 715 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 PPANQ9NQ55 473 aaKnown RBP8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 PCDHA7Q9UN72 937 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 ADGRB2O60241 1585 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 TRPM8Q7Z2W7 1104 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 PATL1Q86TB9 770 aaKnown RBP8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 APOBEC2Q9Y235 224 aaKnown RBP8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 INO80Q9ULG1 1556 aaPredicted RBP8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 BAZ2AQ9UIF9 1905 aaKnown RBP8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 CCDC22O60826 627 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 FAM200BP0CF97 657 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 ZNF12P17014 697 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 HOXB6P17509 224 aaKnown RBP8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 NAPAP54920 295 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 DEFA1P59665 94 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 DEFA3P59666 94 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 TBC1D8BQ0IIM8 1120 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 KRT39Q6A163 491 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 PM20D2Q8IYS1 436 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 SCAIQ8N9R8 606 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 ERMNQ8TAM6 284 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 CYFIP2Q96F07 1278 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 STK17AQ9UEE5 414 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 ALOX5P09917 674 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 DLG4P78352 724 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 ZNF174Q15697 407 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 CWF19L1Q69YN2 538 aaKnown RBP8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 MYLK4Q86YV6 388 aaPredicted RBP8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 NELFBQ8WX92 580 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 LZTS2Q9BRK4 669 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 RAP1GDS1P52306 607 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 PALM2Q8IXS6 379 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 FAM81BQ96LP2 452 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 MTA3Q9BTC8 594 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 RANBP17Q9H2T7 1088 aaKnown RBP8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 HNRNPRO43390 633 aaKnown RBP8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 RPL26P61254 145 aaKnown RBP8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 ASPHQ12797 758 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 C11orf57Q6ZUT1 292 aaPredicted RBP8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 MMGT1Q8N4V1 131 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 ALKBH8Q96BT7 664 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms