RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 PNOCQ13519 176 aa10.71□□□□□ -0.7
NEDD1-203ENST00000429527 SPATA1Q5VX52 437 aa10.71□□□□□ -0.7
NEDD1-203ENST00000429527 TMCO3Q6UWJ1 677 aa10.71□□□□□ -0.7
NEDD1-203ENST00000429527 ARRDC4Q8NCT1 418 aa10.71□□□□□ -0.7
NEDD1-203ENST00000429527 PNMA1Q8ND90 353 aa10.71□□□□□ -0.7
NEDD1-203ENST00000429527 CTAGE1Q96RT6 745 aa10.71□□□□□ -0.7
NEDD1-203ENST00000429527 ABHD16BQ9H3Z7 469 aa10.71□□□□□ -0.7
NEDD1-203ENST00000429527 A1CFQ9NQ94 594 aaKnown RBP10.71□□□□□ -0.7
NEDD1-203ENST00000429527 TRMT1Q9NXH9 659 aaKnown RBP10.71□□□□□ -0.7
NEDD1-203ENST00000429527 SOWAHBA6NEL2 793 aa10.7□□□□□ -0.7
NEDD1-203ENST00000429527 DUSP11O75319 330 aaKnown RBP10.7□□□□□ -0.7
NEDD1-203ENST00000429527 AKR1A1P14550 325 aa10.7□□□□□ -0.7
NEDD1-203ENST00000429527 HSD17B4P51659 736 aa10.7□□□□□ -0.7
NEDD1-203ENST00000429527 AMPD2Q01433 879 aa10.7□□□□□ -0.7
NEDD1-203ENST00000429527 DPYDQ12882 1025 aa10.7□□□□□ -0.7
NEDD1-203ENST00000429527 E2F4Q16254 413 aa10.7□□□□□ -0.7
NEDD1-203ENST00000429527 DPP9Q86TI2 863 aa10.7□□□□□ -0.7
NEDD1-203ENST00000429527 UBXN4Q92575 508 aa10.7□□□□□ -0.7
NEDD1-203ENST00000429527 FERMT2Q96AC1 680 aa10.7□□□□□ -0.7
NEDD1-203ENST00000429527 PHF20Q9BVI0 1012 aa10.7□□□□□ -0.7
NEDD1-203ENST00000429527 SPZ1Q9BXG8 430 aa10.7□□□□□ -0.7
NEDD1-203ENST00000429527 RNF146Q9NTX7 359 aa10.7□□□□□ -0.7
NEDD1-203ENST00000429527 ADGRG1Q9Y653 693 aa10.7□□□□□ -0.7
NEDD1-203ENST00000429527 AARSP49588 968 aaKnown RBP eCLIP10.7□□□□□ -0.7
NEDD1-203ENST00000429527 TROAPQ12815 778 aa10.7□□□□□ -0.7
NEDD1-203ENST00000429527 CCDC96Q2M329 555 aa10.7□□□□□ -0.7
NEDD1-203ENST00000429527 GPR153Q6NV75 609 aa10.7□□□□□ -0.7
NEDD1-203ENST00000429527 SRGAP1Q7Z6B7 1085 aa10.7□□□□□ -0.7
NEDD1-203ENST00000429527 RAVER2Q9HCJ3 691 aaKnown RBP10.7□□□□□ -0.7
NEDD1-203ENST00000429527 MOXD2PA6NHM9 499 aa10.69□□□□□ -0.7
NEDD1-203ENST00000429527 SLC34A2O95436 690 aa10.69□□□□□ -0.7
NEDD1-203ENST00000429527 GOLGA1Q92805 767 aa10.69□□□□□ -0.7
NEDD1-203ENST00000429527 TRERF1Q96PN7 1200 aa10.69□□□□□ -0.7
NEDD1-203ENST00000429527 KAT14Q9H8E8 782 aa10.69□□□□□ -0.7
NEDD1-203ENST00000429527 GNEQ9Y223 722 aaKnown RBP10.69□□□□□ -0.7
NEDD1-203ENST00000429527 A0A087WWV3 80 aa10.69□□□□□ -0.7
NEDD1-203ENST00000429527 B4E1Z4 1266 aa10.69□□□□□ -0.7
NEDD1-203ENST00000429527 CPLX1O14810 134 aa10.69□□□□□ -0.7
NEDD1-203ENST00000429527 NKRFO15226 690 aaKnown RBP eCLIP10.69□□□□□ -0.7
NEDD1-203ENST00000429527 TFRCP02786 760 aaKnown RBP10.69□□□□□ -0.7
NEDD1-203ENST00000429527 TRAPPC10P48553 1259 aa10.69□□□□□ -0.7
NEDD1-203ENST00000429527 FOXR2Q6PJQ5 311 aa10.69□□□□□ -0.7
NEDD1-203ENST00000429527 CEP112Q8N8E3 955 aa10.69□□□□□ -0.7
NEDD1-203ENST00000429527 WDR24Q96S15 920 aa10.69□□□□□ -0.7
NEDD1-203ENST00000429527 ANKZF1Q9H8Y5 726 aa10.69□□□□□ -0.7
NEDD1-203ENST00000429527 STX8Q9UNK0 236 aa10.69□□□□□ -0.7
NEDD1-203ENST00000429527 CCDC196A0A1B0GTZ2 297 aa10.69□□□□□ -0.7
NEDD1-203ENST00000429527 GUCY1B3Q02153 619 aa10.69□□□□□ -0.7
NEDD1-203ENST00000429527 PPP2R3AQ06190 1150 aa10.69□□□□□ -0.7
NEDD1-203ENST00000429527 ZRSR1Q15695 479 aaKnown RBP10.69□□□□□ -0.7
NEDD1-203ENST00000429527 NPY5RQ15761 445 aa10.69□□□□□ -0.7
NEDD1-203ENST00000429527 BEND6Q5SZJ8 279 aaPredicted RBP10.69□□□□□ -0.7
NEDD1-203ENST00000429527 IQSEC1Q6DN90 963 aa10.69□□□□□ -0.7
NEDD1-203ENST00000429527 EMID1Q96A84 441 aaPredicted RBP10.69□□□□□ -0.7
NEDD1-203ENST00000429527 TOX2Q96NM4 488 aa10.69□□□□□ -0.7
NEDD1-203ENST00000429527 IWS1Q96ST2 819 aa10.69□□□□□ -0.7
NEDD1-203ENST00000429527 FAM184BQ9ULE4 1060 aa10.69□□□□□ -0.7
NEDD1-203ENST00000429527 MCM3APO60318 1980 aa10.69□□□□□ -0.7
NEDD1-203ENST00000429527 PPP1R3GB7ZBB8 358 aa10.68□□□□□ -0.7
NEDD1-203ENST00000429527 MFAP3LO75121 409 aa10.68□□□□□ -0.7
NEDD1-203ENST00000429527 CALM1P0DP23 149 aa10.68□□□□□ -0.7
NEDD1-203ENST00000429527 CALM2P0DP24 149 aa10.68□□□□□ -0.7
NEDD1-203ENST00000429527 CALM3P0DP25 149 aa10.68□□□□□ -0.7
NEDD1-203ENST00000429527 HAND2P61296 217 aa10.68□□□□□ -0.7
NEDD1-203ENST00000429527 SSRP1Q08945 709 aaKnown RBP10.68□□□□□ -0.7
NEDD1-203ENST00000429527 WHAMMP3Q1A5X7 153 aa10.68□□□□□ -0.7
NEDD1-203ENST00000429527 TAPT1Q6NXT6 567 aa10.68□□□□□ -0.7
NEDD1-203ENST00000429527 KCTD1Q719H9 257 aa10.68□□□□□ -0.7
NEDD1-203ENST00000429527 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.68□□□□□ -0.7
NEDD1-203ENST00000429527 CDC23Q9UJX2 597 aa10.68□□□□□ -0.7
NEDD1-203ENST00000429527 SMCHD1A6NHR9 2005 aa10.68□□□□□ -0.7
NEDD1-203ENST00000429527 SCN10AQ9Y5Y9 1956 aa10.68□□□□□ -0.7
NEDD1-203ENST00000429527 MYL1P05976 194 aa10.68□□□□□ -0.7
NEDD1-203ENST00000429527 HOXD8P13378 290 aaPredicted RBP10.68□□□□□ -0.7
NEDD1-203ENST00000429527 CASQ1P31415 396 aa10.68□□□□□ -0.7
NEDD1-203ENST00000429527 ITIH3Q06033 890 aa10.68□□□□□ -0.7
NEDD1-203ENST00000429527 TRDNQ13061 729 aa10.68□□□□□ -0.7
NEDD1-203ENST00000429527 ZNF771Q7L3S4 317 aaPredicted RBP10.68□□□□□ -0.7
NEDD1-203ENST00000429527 ANKRD33Q7Z3H0 272 aa10.68□□□□□ -0.7
NEDD1-203ENST00000429527 MCF2L2Q86YR7 1114 aa10.68□□□□□ -0.7
NEDD1-203ENST00000429527 CNNM3Q8NE01 707 aa10.68□□□□□ -0.7
NEDD1-203ENST00000429527 AGBL1Q96MI9 1066 aa10.68□□□□□ -0.7
NEDD1-203ENST00000429527 JMJD4Q9H9V9 463 aa10.68□□□□□ -0.7
NEDD1-203ENST00000429527 PIK3CDO00329 1044 aa10.68□□□□□ -0.7
NEDD1-203ENST00000429527 PRPF3O43395 683 aaKnown RBP10.68□□□□□ -0.7
NEDD1-203ENST00000429527 PARP1P09874 1014 aaKnown RBP10.68□□□□□ -0.7
NEDD1-203ENST00000429527 LRRC41Q15345 812 aa10.68□□□□□ -0.7
NEDD1-203ENST00000429527 TTBK2Q6IQ55 1244 aa10.68□□□□□ -0.7
NEDD1-203ENST00000429527 TOGARAM2Q6ZUX3 1019 aa10.68□□□□□ -0.7
NEDD1-203ENST00000429527 CHST3Q7LGC8 479 aa10.68□□□□□ -0.7
NEDD1-203ENST00000429527 ZNF592Q92610 1267 aa10.68□□□□□ -0.7
NEDD1-203ENST00000429527 BIN2Q9UBW5 565 aaPredicted RBP10.68□□□□□ -0.7
NEDD1-203ENST00000429527 L1RE1Q9UN81 338 aa10.68□□□□□ -0.7
NEDD1-203ENST00000429527 AKR1B15C9JRZ8 316 aaPredicted RBP10.67□□□□□ -0.7
NEDD1-203ENST00000429527 CCDC175P0C221 793 aa10.67□□□□□ -0.7
NEDD1-203ENST00000429527 CDK7P50613 346 aa10.67□□□□□ -0.7
NEDD1-203ENST00000429527 ALDH5A1P51649 535 aaPredicted RBP10.67□□□□□ -0.7
NEDD1-203ENST00000429527 CDK17Q00537 523 aa10.67□□□□□ -0.7
NEDD1-203ENST00000429527 ACVR2BQ13705 512 aa10.67□□□□□ -0.7
NEDD1-203ENST00000429527 PKN1Q16512 942 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms