RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 EP400NLQ6ZTU2 488 aa19.07■□□□□ 0.64
VARS-216ENST00000428445 TMEM192Q8IY95 271 aa19.07■□□□□ 0.64
VARS-216ENST00000428445 CCDC82Q8N4S0 544 aa19.07■□□□□ 0.64
VARS-216ENST00000428445 MAP4K1Q92918 833 aa19.07■□□□□ 0.64
VARS-216ENST00000428445 FAM122AQ96E09 287 aa19.07■□□□□ 0.64
VARS-216ENST00000428445 RRP36Q96EU6 259 aaKnown RBP19.07■□□□□ 0.64
VARS-216ENST00000428445 STAM2O75886 525 aa19.06■□□□□ 0.64
VARS-216ENST00000428445 GHRP10912 638 aa19.06■□□□□ 0.64
VARS-216ENST00000428445 TCF7P36402 384 aaPredicted RBP19.06■□□□□ 0.64
VARS-216ENST00000428445 UBE2SQ16763 222 aa19.06■□□□□ 0.64
VARS-216ENST00000428445 TCEAL5Q5H9L2 206 aa19.06■□□□□ 0.64
VARS-216ENST00000428445 TMEM31Q5JXX7 168 aa19.06■□□□□ 0.64
VARS-216ENST00000428445 CTCFLQ8NI51 663 aaPredicted RBP19.06■□□□□ 0.64
VARS-216ENST00000428445 CUL5Q93034 780 aa19.06■□□□□ 0.64
VARS-216ENST00000428445 MRPL38Q96DV4 380 aaKnown RBP19.06■□□□□ 0.64
VARS-216ENST00000428445 SPZ1Q9BXG8 430 aa19.06■□□□□ 0.64
VARS-216ENST00000428445 IFIH1Q9BYX4 1025 aaKnown RBP19.06■□□□□ 0.64
VARS-216ENST00000428445 GSTTP1A0A1W2PQM5 241 aa19.05■□□□□ 0.64
VARS-216ENST00000428445 H3BNC9 293 aa19.05■□□□□ 0.64
VARS-216ENST00000428445 PRC1O43663 620 aa19.05■□□□□ 0.64
VARS-216ENST00000428445 CSPG5O95196 566 aa19.05■□□□□ 0.64
VARS-216ENST00000428445 GNAT1P11488 350 aa19.05■□□□□ 0.64
VARS-216ENST00000428445 FAM26DQ5JW98 314 aa19.05■□□□□ 0.64
VARS-216ENST00000428445 PTCRAQ6ISU1 281 aaPredicted RBP19.05■□□□□ 0.64
VARS-216ENST00000428445 FAM178BQ8IXR5 827 aa19.05■□□□□ 0.64
VARS-216ENST00000428445 BANK1Q8NDB2 785 aa19.05■□□□□ 0.64
VARS-216ENST00000428445 LRRC2Q9BYS8 371 aa19.05■□□□□ 0.64
VARS-216ENST00000428445 ATG2AQ2TAZ0 1938 aa19.05■□□□□ 0.64
VARS-216ENST00000428445 KCNA2P16389 499 aa19.04■□□□□ 0.64
VARS-216ENST00000428445 ITGB5P18084 799 aa19.04■□□□□ 0.64
VARS-216ENST00000428445 NFXL1Q6ZNB6 911 aa19.04■□□□□ 0.64
VARS-216ENST00000428445 NLRX1Q86UT6 975 aa19.04■□□□□ 0.64
VARS-216ENST00000428445 DNAJB3Q8WWF6 145 aa19.04■□□□□ 0.64
VARS-216ENST00000428445 SENP7Q9BQF6 1050 aa19.04■□□□□ 0.64
VARS-216ENST00000428445 ZNF215Q9UL58 517 aaPredicted RBP19.04■□□□□ 0.64
VARS-216ENST00000428445 GRXCR2A6NFK2 248 aa19.03■□□□□ 0.64
VARS-216ENST00000428445 PI4K2BG5E9Z4 385 aa19.03■□□□□ 0.64
VARS-216ENST00000428445 PIK3CDO00329 1044 aa19.03■□□□□ 0.64
VARS-216ENST00000428445 CAND2O75155 1236 aa19.03■□□□□ 0.64
VARS-216ENST00000428445 DDAH1O94760 285 aa19.03■□□□□ 0.64
VARS-216ENST00000428445 IGBP1P78318 339 aa19.03■□□□□ 0.64
VARS-216ENST00000428445 MGAT3Q09327 533 aa19.03■□□□□ 0.64
VARS-216ENST00000428445 LPIN1Q14693 890 aa19.03■□□□□ 0.64
VARS-216ENST00000428445 CASC1Q6TDU7 716 aa19.03■□□□□ 0.64
VARS-216ENST00000428445 GJD3Q8N144 294 aa19.03■□□□□ 0.64
VARS-216ENST00000428445 PSTPIP2Q9H939 334 aa19.03■□□□□ 0.64
VARS-216ENST00000428445 SEC63Q9UGP8 760 aaKnown RBP19.03■□□□□ 0.64
VARS-216ENST00000428445 C5orf42Q9H799 3197 aa19.03■□□□□ 0.64
VARS-216ENST00000428445 NRCAMQ92823 1304 aa19.02■□□□□ 0.64
VARS-216ENST00000428445 SH2B2O14492 632 aaPredicted RBP19.02■□□□□ 0.64
VARS-216ENST00000428445 ENPP3O14638 875 aa19.02■□□□□ 0.64
VARS-216ENST00000428445 SSTR3P32745 418 aaPredicted RBP19.02■□□□□ 0.64
VARS-216ENST00000428445 KIF5BP33176 963 aa19.02■□□□□ 0.64
VARS-216ENST00000428445 PPFIA1Q13136 1202 aa19.02■□□□□ 0.64
VARS-216ENST00000428445 PTPROQ16827 1216 aa19.02■□□□□ 0.64
VARS-216ENST00000428445 MARCH8Q5T0T0 291 aa19.02■□□□□ 0.64
VARS-216ENST00000428445 NEK9Q8TD19 979 aa19.02■□□□□ 0.64
VARS-216ENST00000428445 SEPT1Q8WYJ6 367 aa19.02■□□□□ 0.64
VARS-216ENST00000428445 IL17RAQ96F46 866 aa19.02■□□□□ 0.64
VARS-216ENST00000428445 MAP3K14Q99558 947 aa19.02■□□□□ 0.64
VARS-216ENST00000428445 EHMT1Q9H9B1 1298 aa19.02■□□□□ 0.64
VARS-216ENST00000428445 LOXHD1Q8IVV2 1947 aa19.02■□□□□ 0.63
VARS-216ENST00000428445 CCDC69A6NI79 296 aa19.01■□□□□ 0.63
VARS-216ENST00000428445 GRM6O15303 877 aa19.01■□□□□ 0.63
VARS-216ENST00000428445 GPR37L1O60883 481 aa19.01■□□□□ 0.63
VARS-216ENST00000428445 LINC00271P0C7V0 271 aa19.01■□□□□ 0.63
VARS-216ENST00000428445 CTNNB1P35222 781 aa19.01■□□□□ 0.63
VARS-216ENST00000428445 GRIK4Q16099 956 aa19.01■□□□□ 0.63
VARS-216ENST00000428445 FIBCD1Q8N539 461 aa19.01■□□□□ 0.63
VARS-216ENST00000428445 APBB2Q92870 758 aa19.01■□□□□ 0.63
VARS-216ENST00000428445 GLG1Q92896 1179 aa19.01■□□□□ 0.63
VARS-216ENST00000428445 SAMD11Q96NU1 681 aa19.01■□□□□ 0.63
VARS-216ENST00000428445 PCYT2Q99447 389 aa19.01■□□□□ 0.63
VARS-216ENST00000428445 LSG1Q9H089 658 aaKnown RBP19.01■□□□□ 0.63
VARS-216ENST00000428445 AGO3Q9H9G7 860 aaKnown RBP19.01■□□□□ 0.63
VARS-216ENST00000428445 PCDHA6Q9UN73 950 aa19.01■□□□□ 0.63
VARS-216ENST00000428445 PCDHA8Q9Y5H6 950 aa19.01■□□□□ 0.63
VARS-216ENST00000428445 UBIAD1Q9Y5Z9 338 aa19.01■□□□□ 0.63
VARS-216ENST00000428445 SLC27A2O14975 620 aa19■□□□□ 0.63
VARS-216ENST00000428445 SMARCA1P28370 1054 aa19■□□□□ 0.63
VARS-216ENST00000428445 GTF2F1P35269 517 aaKnown RBP eCLIP19■□□□□ 0.63
VARS-216ENST00000428445 TMEM62Q0P6H9 643 aa19■□□□□ 0.63
VARS-216ENST00000428445 CLUL1Q15846 466 aa19■□□□□ 0.63
VARS-216ENST00000428445 XRRA1Q6P2D8 792 aa19■□□□□ 0.63
VARS-216ENST00000428445 CYP2W1Q8TAV3 490 aa19■□□□□ 0.63
VARS-216ENST00000428445 GPRASP2Q96D09 838 aa19■□□□□ 0.63
VARS-216ENST00000428445 PGBD1Q96JS3 809 aa19■□□□□ 0.63
VARS-216ENST00000428445 FAM49AQ9H0Q0 323 aaPredicted RBP19■□□□□ 0.63
VARS-216ENST00000428445 NSUN3Q9H649 340 aaKnown RBP19■□□□□ 0.63
VARS-216ENST00000428445 CLDND1Q9NY35 253 aa19■□□□□ 0.63
VARS-216ENST00000428445 TUBE1Q9UJT0 475 aa19■□□□□ 0.63
VARS-216ENST00000428445 CDY2AQ9Y6F7 541 aa19■□□□□ 0.63
VARS-216ENST00000428445 RALGAPA2Q2PPJ7 1873 aa19■□□□□ 0.63
VARS-216ENST00000428445 MCM5P33992 734 aa18.99■□□□□ 0.63
VARS-216ENST00000428445 LTBRP36941 435 aa18.99■□□□□ 0.63
VARS-216ENST00000428445 DLX2Q07687 328 aaPredicted RBP18.99■□□□□ 0.63
VARS-216ENST00000428445 MTMR1Q13613 665 aa18.99■□□□□ 0.63
VARS-216ENST00000428445 TIGD5Q53EQ6 642 aa18.99■□□□□ 0.63
VARS-216ENST00000428445 FBXO47Q5MNV8 452 aa18.99■□□□□ 0.63
VARS-216ENST00000428445 RTN4RL1Q86UN2 441 aaPredicted RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms