RNA–Protein interactions for RNA: ENST00000428104.2

PDE6D-203, Transcript of phosphodiesterase 6D, humanhuman

TSL 3

Gene PDE6D, Length 627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-203ENST00000428104 UBALD2Q8IYN6 164 aa16.84■□□□□ 0.29
PDE6D-203ENST00000428104 ATP8B4Q8TF62 1192 aa16.84■□□□□ 0.29
PDE6D-203ENST00000428104 APOL5Q9BWW9 433 aa16.84■□□□□ 0.29
PDE6D-203ENST00000428104 CPVLQ9H3G5 476 aa16.84■□□□□ 0.29
PDE6D-203ENST00000428104 TUT1Q9H6E5 874 aaKnown RBP16.84■□□□□ 0.29
PDE6D-203ENST00000428104 SETD4Q9NVD3 440 aa16.84■□□□□ 0.29
PDE6D-203ENST00000428104 SORCS3Q9UPU3 1222 aa16.84■□□□□ 0.29
PDE6D-203ENST00000428104 SUPT16HQ9Y5B9 1047 aaKnown RBP16.84■□□□□ 0.29
PDE6D-203ENST00000428104 CHRNA1P02708 482 aa16.83■□□□□ 0.28
PDE6D-203ENST00000428104 NR3C2P08235 984 aa16.83■□□□□ 0.28
PDE6D-203ENST00000428104 TSHZ3Q63HK5 1081 aa16.83■□□□□ 0.28
PDE6D-203ENST00000428104 KIAA2013Q8IYS2 634 aa16.83■□□□□ 0.28
PDE6D-203ENST00000428104 MICAL1Q8TDZ2 1067 aa16.83■□□□□ 0.28
PDE6D-203ENST00000428104 NEK1Q96PY6 1258 aa16.83■□□□□ 0.28
PDE6D-203ENST00000428104 S1PR5Q9H228 398 aa16.83■□□□□ 0.28
PDE6D-203ENST00000428104 ECHDC1Q9NTX5 307 aa16.83■□□□□ 0.28
PDE6D-203ENST00000428104 CDH22Q9UJ99 828 aa16.83■□□□□ 0.28
PDE6D-203ENST00000428104 CHD6Q8TD26 2715 aa16.82■□□□□ 0.28
PDE6D-203ENST00000428104 FOXP2O15409 715 aa16.82■□□□□ 0.28
PDE6D-203ENST00000428104 LGALS2P05162 132 aa16.82■□□□□ 0.28
PDE6D-203ENST00000428104 ARP10275 920 aa16.82■□□□□ 0.28
PDE6D-203ENST00000428104 SP2Q02086 613 aa16.82■□□□□ 0.28
PDE6D-203ENST00000428104 LPIN1Q14693 890 aa16.82■□□□□ 0.28
PDE6D-203ENST00000428104 MFSD1Q9H3U5 465 aa16.82■□□□□ 0.28
PDE6D-203ENST00000428104 PXMP2Q9NR77 195 aa16.82■□□□□ 0.28
PDE6D-203ENST00000428104 GOLGA8HP0CJ92 632 aa16.81■□□□□ 0.28
PDE6D-203ENST00000428104 MYCLP12524 364 aaPredicted RBP16.81■□□□□ 0.28
PDE6D-203ENST00000428104 UBA1P22314 1058 aaKnown RBP16.81■□□□□ 0.28
PDE6D-203ENST00000428104 CMTR2Q8IYT2 770 aaKnown RBP16.81■□□□□ 0.28
PDE6D-203ENST00000428104 KCNG4Q8TDN1 519 aa16.81■□□□□ 0.28
PDE6D-203ENST00000428104 LINC01599Q8WXQ3 324 aa16.81■□□□□ 0.28
PDE6D-203ENST00000428104 BCAS3Q9H6U6 928 aa16.81■□□□□ 0.28
PDE6D-203ENST00000428104 EHMT1Q9H9B1 1298 aa16.81■□□□□ 0.28
PDE6D-203ENST00000428104 CEP250Q9BV73 2442 aa16.8■□□□□ 0.28
PDE6D-203ENST00000428104 ABCB11O95342 1321 aa16.8■□□□□ 0.28
PDE6D-203ENST00000428104 TECP42680 631 aa16.8■□□□□ 0.28
PDE6D-203ENST00000428104 GATMP50440 423 aa16.8■□□□□ 0.28
PDE6D-203ENST00000428104 CLCN5P51795 746 aa16.8■□□□□ 0.28
PDE6D-203ENST00000428104 ARHGAP4P98171 946 aa16.8■□□□□ 0.28
PDE6D-203ENST00000428104 PUM1Q14671 1186 aaKnown RBP eCLIP16.8■□□□□ 0.28
PDE6D-203ENST00000428104 DUSP6Q16828 381 aa16.8■□□□□ 0.28
PDE6D-203ENST00000428104 SYCE2Q6PIF2 218 aa16.8■□□□□ 0.28
PDE6D-203ENST00000428104 GPKOWQ92917 476 aaPredicted RBP eCLIP16.8■□□□□ 0.28
PDE6D-203ENST00000428104 UBA5Q9GZZ9 404 aa16.8■□□□□ 0.28
PDE6D-203ENST00000428104 TOMM22Q9NS69 142 aa16.8■□□□□ 0.28
PDE6D-203ENST00000428104 KIAA1217Q5T5P2 1943 aa16.8■□□□□ 0.28
PDE6D-203ENST00000428104 C2CD4DB7Z1M9 353 aa16.79■□□□□ 0.28
PDE6D-203ENST00000428104 ORC4O43929 436 aa16.79■□□□□ 0.28
PDE6D-203ENST00000428104 ASGR2P07307 311 aa16.79■□□□□ 0.28
PDE6D-203ENST00000428104 SNHG28P0DPA3 235 aa16.79■□□□□ 0.28
PDE6D-203ENST00000428104 GNAT1P11488 350 aa16.79■□□□□ 0.28
PDE6D-203ENST00000428104 ANGPT1Q15389 498 aa16.79■□□□□ 0.28
PDE6D-203ENST00000428104 CDC37Q16543 378 aaPredicted RBP16.79■□□□□ 0.28
PDE6D-203ENST00000428104 RRP12Q5JTH9 1297 aaKnown RBP16.79■□□□□ 0.28
PDE6D-203ENST00000428104 CWF19L1Q69YN2 538 aaKnown RBP16.79■□□□□ 0.28
PDE6D-203ENST00000428104 ANKRD54Q6NXT1 300 aa16.79■□□□□ 0.28
PDE6D-203ENST00000428104 RUFY4Q6ZNE9 571 aa16.79■□□□□ 0.28
PDE6D-203ENST00000428104 TRIM50Q86XT4 487 aa16.79■□□□□ 0.28
PDE6D-203ENST00000428104 MCF2L2Q86YR7 1114 aa16.79■□□□□ 0.28
PDE6D-203ENST00000428104 CRIPAKQ8N1N5 446 aa16.79■□□□□ 0.28
PDE6D-203ENST00000428104 FLCNQ8NFG4 579 aa16.79■□□□□ 0.28
PDE6D-203ENST00000428104 LMBR1Q8WVP7 490 aa16.79■□□□□ 0.28
PDE6D-203ENST00000428104 ZFP91Q96JP5 570 aaPredicted RBP16.79■□□□□ 0.28
PDE6D-203ENST00000428104 LRRCC1Q9C099 1032 aa16.79■□□□□ 0.28
PDE6D-203ENST00000428104 MAF1Q9H063 256 aa16.79■□□□□ 0.28
PDE6D-203ENST00000428104 MLXIPQ9HAP2 919 aa16.79■□□□□ 0.28
PDE6D-203ENST00000428104 NR2E1Q9Y466 385 aa16.79■□□□□ 0.28
PDE6D-203ENST00000428104 CCDC171Q6TFL3 1326 aa16.78■□□□□ 0.28
PDE6D-203ENST00000428104 PI15O43692 258 aa16.78■□□□□ 0.28
PDE6D-203ENST00000428104 HSPD1P10809 573 aaKnown RBP16.78■□□□□ 0.28
PDE6D-203ENST00000428104 ERVFC1P60507 584 aa16.78■□□□□ 0.28
PDE6D-203ENST00000428104 ADAM17P78536 824 aa16.78■□□□□ 0.28
PDE6D-203ENST00000428104 LLGL2Q6P1M3 1020 aa16.78■□□□□ 0.28
PDE6D-203ENST00000428104 IL31RAQ8NI17 732 aa16.78■□□□□ 0.28
PDE6D-203ENST00000428104 CDCA3Q99618 268 aaPredicted RBP16.78■□□□□ 0.28
PDE6D-203ENST00000428104 PDCD2LQ9BRP1 358 aa16.78■□□□□ 0.28
PDE6D-203ENST00000428104 ANAPC4Q9UJX5 808 aa16.78■□□□□ 0.28
PDE6D-203ENST00000428104 CFBP00751 764 aa16.77■□□□□ 0.28
PDE6D-203ENST00000428104 LMNAP02545 664 aaKnown RBP16.77■□□□□ 0.28
PDE6D-203ENST00000428104 MGAT3Q09327 533 aa16.77■□□□□ 0.28
PDE6D-203ENST00000428104 KCNC3Q14003 757 aa16.77■□□□□ 0.28
PDE6D-203ENST00000428104 FBXO47Q5MNV8 452 aa16.77■□□□□ 0.28
PDE6D-203ENST00000428104 KCNV1Q6PIU1 500 aa16.77■□□□□ 0.28
PDE6D-203ENST00000428104 RTN4RL1Q86UN2 441 aaPredicted RBP16.77■□□□□ 0.28
PDE6D-203ENST00000428104 NPAS4Q8IUM7 802 aa16.77■□□□□ 0.28
PDE6D-203ENST00000428104 CHD8Q9HCK8 2581 aa16.76■□□□□ 0.27
PDE6D-203ENST00000428104 FSD2A1L4K1 749 aa16.76■□□□□ 0.27
PDE6D-203ENST00000428104 NOP56O00567 594 aaKnown RBP16.76■□□□□ 0.27
PDE6D-203ENST00000428104 SRGAP2BP0DMP2 458 aa16.76■□□□□ 0.27
PDE6D-203ENST00000428104 ZMYM1Q5SVZ6 1142 aa16.76■□□□□ 0.27
PDE6D-203ENST00000428104 TMEM184AQ6ZMB5 413 aa16.76■□□□□ 0.27
PDE6D-203ENST00000428104 CCDC105Q8IYK2 499 aa16.76■□□□□ 0.27
PDE6D-203ENST00000428104 USP26Q9BXU7 913 aa16.76■□□□□ 0.27
PDE6D-203ENST00000428104 POMKQ9H5K3 350 aa16.76■□□□□ 0.27
PDE6D-203ENST00000428104 AGO3Q9H9G7 860 aaKnown RBP16.76■□□□□ 0.27
PDE6D-203ENST00000428104 TCP11L1Q9NUJ3 509 aa16.76■□□□□ 0.27
PDE6D-203ENST00000428104 DLL3Q9NYJ7 618 aa16.76■□□□□ 0.27
PDE6D-203ENST00000428104 MRPL11Q9Y3B7 192 aaKnown RBP16.76■□□□□ 0.27
PDE6D-203ENST00000428104 BAHCC1Q9P281 2608 aa16.76■□□□□ 0.27
PDE6D-203ENST00000428104 TTC3P53804 2025 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms