RNA–Protein interactions for RNA: ENST00000427505.5

ZNF440-203, Transcript of zinc finger protein 440, humanhuman

TSL 3

Gene ZNF440, Length 920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-203ENST00000427505 TDRD10Q5VZ19 366 aaKnown RBP6.31□□□□□ -1.4
ZNF440-203ENST00000427505 KSR2Q6VAB6 950 aa6.31□□□□□ -1.4
ZNF440-203ENST00000427505 PPP1R42Q7Z4L9 355 aa6.31□□□□□ -1.4
ZNF440-203ENST00000427505 CCDC144CPQ8IYA2 1237 aa6.31□□□□□ -1.4
ZNF440-203ENST00000427505 LINS1Q8NG48 757 aa6.31□□□□□ -1.4
ZNF440-203ENST00000427505 MAP6Q96JE9 813 aa6.31□□□□□ -1.4
ZNF440-203ENST00000427505 GP6Q9HCN6 339 aa6.31□□□□□ -1.4
ZNF440-203ENST00000427505 DDX21Q9NR30 783 aaKnown RBP eCLIP6.31□□□□□ -1.4
ZNF440-203ENST00000427505 FHOD1Q9Y613 1164 aa6.31□□□□□ -1.4
ZNF440-203ENST00000427505 TNS3Q68CZ2 1445 aa6.31□□□□□ -1.4
ZNF440-203ENST00000427505 RFX7Q2KHR2 1363 aa6.31□□□□□ -1.4
ZNF440-203ENST00000427505 PI4KAP2A4QPH2 592 aa6.3□□□□□ -1.4
ZNF440-203ENST00000427505 FAM86C2PA6NEL3 165 aa6.3□□□□□ -1.4
ZNF440-203ENST00000427505 SGSM2O43147 1006 aa6.3□□□□□ -1.4
ZNF440-203ENST00000427505 SRGAP3O43295 1099 aa6.3□□□□□ -1.4
ZNF440-203ENST00000427505 CBFA2T2O43439 604 aa6.3□□□□□ -1.4
ZNF440-203ENST00000427505 GSNP06396 782 aa6.3□□□□□ -1.4
ZNF440-203ENST00000427505 SYPP08247 313 aa6.3□□□□□ -1.4
ZNF440-203ENST00000427505 KIR2DL1P43626 348 aaPredicted RBP6.3□□□□□ -1.4
ZNF440-203ENST00000427505 KIR2DL2P43627 348 aaPredicted RBP6.3□□□□□ -1.4
ZNF440-203ENST00000427505 ZNF445P59923 1031 aa6.3□□□□□ -1.4
ZNF440-203ENST00000427505 MESP2Q0VG99 397 aa6.3□□□□□ -1.4
ZNF440-203ENST00000427505 DCAF15Q66K64 600 aa6.3□□□□□ -1.4
ZNF440-203ENST00000427505 KRT28Q7Z3Y7 464 aa6.3□□□□□ -1.4
ZNF440-203ENST00000427505 CNTROBQ8N137 903 aa6.3□□□□□ -1.4
ZNF440-203ENST00000427505 PI4KAP1Q8N8J0 262 aa6.3□□□□□ -1.4
ZNF440-203ENST00000427505 SYTL4Q96C24 671 aaPredicted RBP6.3□□□□□ -1.4
ZNF440-203ENST00000427505 LTV1Q96GA3 475 aaPredicted RBP6.3□□□□□ -1.4
ZNF440-203ENST00000427505 GPATCH3Q96I76 525 aa6.3□□□□□ -1.4
ZNF440-203ENST00000427505 FCRL2Q96LA5 508 aaPredicted RBP6.3□□□□□ -1.4
ZNF440-203ENST00000427505 TINF2Q9BSI4 451 aa6.3□□□□□ -1.4
ZNF440-203ENST00000427505 GRPEL1Q9HAV7 217 aa6.3□□□□□ -1.4
ZNF440-203ENST00000427505 MINPP1Q9UNW1 487 aa6.3□□□□□ -1.4
ZNF440-203ENST00000427505 KDM6AO15550 1401 aaPredicted RBP6.3□□□□□ -1.4
ZNF440-203ENST00000427505 PKD1L3Q7Z443 1732 aa6.3□□□□□ -1.4
ZNF440-203ENST00000427505 NPHP3Q7Z494 1330 aa6.29□□□□□ -1.4
ZNF440-203ENST00000427505 COL18A1P39060 1754 aa6.29□□□□□ -1.4
ZNF440-203ENST00000427505 A0A087WZG4 1122 aa6.29□□□□□ -1.4
ZNF440-203ENST00000427505 NOTOA8MTQ0 251 aa6.29□□□□□ -1.4
ZNF440-203ENST00000427505 HIP1O00291 1037 aa6.29□□□□□ -1.4
ZNF440-203ENST00000427505 SURF6O75683 361 aaKnown RBP6.29□□□□□ -1.4
ZNF440-203ENST00000427505 MBD3O95983 291 aa6.29□□□□□ -1.4
ZNF440-203ENST00000427505 NBPF7P0C2Y1 421 aaPredicted RBP6.29□□□□□ -1.4
ZNF440-203ENST00000427505 SNX17Q15036 470 aa6.29□□□□□ -1.4
ZNF440-203ENST00000427505 TIGD5Q53EQ6 642 aa6.29□□□□□ -1.4
ZNF440-203ENST00000427505 SPPL2CQ8IUH8 684 aa6.29□□□□□ -1.4
ZNF440-203ENST00000427505 FAM169BQ8N8A8 192 aa6.29□□□□□ -1.4
ZNF440-203ENST00000427505 BHLHE22Q8NFJ8 381 aaPredicted RBP6.29□□□□□ -1.4
ZNF440-203ENST00000427505 RUFY2Q8WXA3 655 aa6.29□□□□□ -1.4
ZNF440-203ENST00000427505 LRRC59Q96AG4 307 aaKnown RBP6.29□□□□□ -1.4
ZNF440-203ENST00000427505 LIN37Q96GY3 246 aaPredicted RBP6.29□□□□□ -1.4
ZNF440-203ENST00000427505 TMX3Q96JJ7 454 aa6.29□□□□□ -1.4
ZNF440-203ENST00000427505 ORAI2Q96SN7 254 aa6.29□□□□□ -1.4
ZNF440-203ENST00000427505 TM6SF1Q9BZW5 370 aa6.29□□□□□ -1.4
ZNF440-203ENST00000427505 RNF32Q9H0A6 362 aa6.29□□□□□ -1.4
ZNF440-203ENST00000427505 FBXL21Q9UKT6 434 aa6.29□□□□□ -1.4
ZNF440-203ENST00000427505 TMEM94Q12767 1356 aa6.29□□□□□ -1.4
ZNF440-203ENST00000427505 GLI3P10071 1580 aa6.28□□□□□ -1.4
ZNF440-203ENST00000427505 LRRC10BA6NIK2 292 aa6.28□□□□□ -1.4
ZNF440-203ENST00000427505 GRM8O00222 908 aa6.28□□□□□ -1.4
ZNF440-203ENST00000427505 FARP2O94887 1054 aaPredicted RBP6.28□□□□□ -1.4
ZNF440-203ENST00000427505 C8AP07357 584 aa6.28□□□□□ -1.4
ZNF440-203ENST00000427505 CD247P20963 164 aa6.28□□□□□ -1.4
ZNF440-203ENST00000427505 NEK4P51957 841 aa6.28□□□□□ -1.4
ZNF440-203ENST00000427505 ZNF790Q6PG37 636 aa6.28□□□□□ -1.4
ZNF440-203ENST00000427505 CRTC3Q6UUV7 619 aa6.28□□□□□ -1.4
ZNF440-203ENST00000427505 CLASRPQ8N2M8 674 aaKnown RBP6.28□□□□□ -1.4
ZNF440-203ENST00000427505 KLHL6Q8WZ60 621 aa6.28□□□□□ -1.4
ZNF440-203ENST00000427505 RAPGEF4Q8WZA2 1011 aa6.28□□□□□ -1.4
ZNF440-203ENST00000427505 SHISA4Q96DD7 197 aa6.28□□□□□ -1.4
ZNF440-203ENST00000427505 HHIPL1Q96JK4 782 aa6.28□□□□□ -1.4
ZNF440-203ENST00000427505 HAUS7Q99871 368 aa6.28□□□□□ -1.4
ZNF440-203ENST00000427505 LSG1Q9H089 658 aaKnown RBP6.28□□□□□ -1.4
ZNF440-203ENST00000427505 KLHL25Q9H0H3 589 aa6.28□□□□□ -1.4
ZNF440-203ENST00000427505 SLC52A2Q9HAB3 445 aa6.28□□□□□ -1.4
ZNF440-203ENST00000427505 CAPN10Q9HC96 672 aa6.28□□□□□ -1.4
ZNF440-203ENST00000427505 ECHDC1Q9NTX5 307 aa6.28□□□□□ -1.4
ZNF440-203ENST00000427505 LMBRD1Q9NUN5 540 aa6.28□□□□□ -1.4
ZNF440-203ENST00000427505 ERVK13-1Q9NX77 482 aa6.28□□□□□ -1.4
ZNF440-203ENST00000427505 JCADQ9P266 1359 aa6.28□□□□□ -1.4
ZNF440-203ENST00000427505 SCN11AQ9UI33 1791 aa6.27□□□□□ -1.41
ZNF440-203ENST00000427505 MEGF6O75095 1541 aa6.27□□□□□ -1.41
ZNF440-203ENST00000427505 KCNQ3O43525 872 aa6.27□□□□□ -1.41
ZNF440-203ENST00000427505 NRDCO43847 1150 aa6.27□□□□□ -1.41
ZNF440-203ENST00000427505 FGRP09769 529 aa6.27□□□□□ -1.41
ZNF440-203ENST00000427505 ITGA4P13612 1032 aa6.27□□□□□ -1.41
ZNF440-203ENST00000427505 VAV1P15498 845 aa6.27□□□□□ -1.41
ZNF440-203ENST00000427505 PHKG2P15735 406 aa6.27□□□□□ -1.41
ZNF440-203ENST00000427505 EIF2S2P20042 333 aaKnown RBP6.27□□□□□ -1.41
ZNF440-203ENST00000427505 RPL10P27635 214 aaKnown RBP6.27□□□□□ -1.41
ZNF440-203ENST00000427505 TRHRP34981 398 aaPredicted RBP6.27□□□□□ -1.41
ZNF440-203ENST00000427505 HS1BP3Q53T59 392 aa6.27□□□□□ -1.41
ZNF440-203ENST00000427505 RTP2Q5QGT7 225 aa6.27□□□□□ -1.41
ZNF440-203ENST00000427505 LRP10Q7Z4F1 713 aa6.27□□□□□ -1.41
ZNF440-203ENST00000427505 IRF2BP1Q8IU81 584 aa6.27□□□□□ -1.41
ZNF440-203ENST00000427505 UNC5CLQ8IV45 518 aa6.27□□□□□ -1.41
ZNF440-203ENST00000427505 IFNL2Q8IZJ0 200 aa6.27□□□□□ -1.41
ZNF440-203ENST00000427505 EVI5LQ96CN4 794 aa6.27□□□□□ -1.41
ZNF440-203ENST00000427505 TTC14Q96N46 770 aa6.27□□□□□ -1.41
ZNF440-203ENST00000427505 PPP1R9BQ96SB3 815 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms