RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 SMIM10L2AP0DMW4 78 aa10.82□□□□□ -0.68
LSG1-202ENST00000427461 SMIM10L2BP0DMW5 78 aa10.82□□□□□ -0.68
LSG1-202ENST00000427461 GATMP50440 423 aa10.82□□□□□ -0.68
LSG1-202ENST00000427461 LAMC2Q13753 1193 aa10.82□□□□□ -0.68
LSG1-202ENST00000427461 COL9A3Q14050 684 aaPredicted RBP10.82□□□□□ -0.68
LSG1-202ENST00000427461 HSDL1Q3SXM5 330 aa10.82□□□□□ -0.68
LSG1-202ENST00000427461 SYDE2Q5VT97 1194 aa10.82□□□□□ -0.68
LSG1-202ENST00000427461 TRMT2AQ8IZ69 625 aaKnown RBP10.82□□□□□ -0.68
LSG1-202ENST00000427461 PPTC7Q8NI37 304 aa10.82□□□□□ -0.68
LSG1-202ENST00000427461 LINC01599Q8WXQ3 324 aa10.82□□□□□ -0.68
LSG1-202ENST00000427461 EMID1Q96A84 441 aaPredicted RBP10.82□□□□□ -0.68
LSG1-202ENST00000427461 C16orf70Q9BSU1 422 aa10.82□□□□□ -0.68
LSG1-202ENST00000427461 ERVK-5Q9HDB9 667 aa10.82□□□□□ -0.68
LSG1-202ENST00000427461 COL20A1Q9P218 1284 aa10.82□□□□□ -0.68
LSG1-202ENST00000427461 FRMPD2Q68DX3 1309 aaPredicted RBP10.82□□□□□ -0.68
LSG1-202ENST00000427461 B4DLN1 442 aa10.81□□□□□ -0.68
LSG1-202ENST00000427461 CHRNA1P02708 482 aa10.81□□□□□ -0.68
LSG1-202ENST00000427461 HOXD8P13378 290 aaPredicted RBP10.81□□□□□ -0.68
LSG1-202ENST00000427461 HOXC8P31273 242 aa10.81□□□□□ -0.68
LSG1-202ENST00000427461 MRPL12P52815 198 aaKnown RBP10.81□□□□□ -0.68
LSG1-202ENST00000427461 TMEM184AQ6ZMB5 413 aa10.81□□□□□ -0.68
LSG1-202ENST00000427461 CMTR2Q8IYT2 770 aaKnown RBP10.81□□□□□ -0.68
LSG1-202ENST00000427461 SUMF1Q8NBK3 374 aa10.81□□□□□ -0.68
LSG1-202ENST00000427461 RHPN1Q8TCX5 695 aa10.81□□□□□ -0.68
LSG1-202ENST00000427461 FRAT1Q92837 279 aaPredicted RBP10.81□□□□□ -0.68
LSG1-202ENST00000427461 RTP3Q9BQQ7 232 aa10.81□□□□□ -0.68
LSG1-202ENST00000427461 GPCPD1Q9NPB8 672 aa10.81□□□□□ -0.68
LSG1-202ENST00000427461 SH2B1Q9NRF2 756 aaPredicted RBP10.81□□□□□ -0.68
LSG1-202ENST00000427461 IL17RBQ9NRM6 502 aa10.81□□□□□ -0.68
LSG1-202ENST00000427461 MRVI1Q9Y6F6 885 aa10.81□□□□□ -0.68
LSG1-202ENST00000427461 CAND2O75155 1236 aa10.8□□□□□ -0.68
LSG1-202ENST00000427461 PPFIA4O75335 1185 aa10.8□□□□□ -0.68
LSG1-202ENST00000427461 CT47B1P0C2W7 299 aaPredicted RBP10.8□□□□□ -0.68
LSG1-202ENST00000427461 TDO2P48775 406 aa10.8□□□□□ -0.68
LSG1-202ENST00000427461 APOBRQ0VD83 1088 aa10.8□□□□□ -0.68
LSG1-202ENST00000427461 LPIN1Q14693 890 aa10.8□□□□□ -0.68
LSG1-202ENST00000427461 STXBP2Q15833 593 aa10.8□□□□□ -0.68
LSG1-202ENST00000427461 FAM26DQ5JW98 314 aa10.8□□□□□ -0.68
LSG1-202ENST00000427461 MYSM1Q5VVJ2 828 aa10.8□□□□□ -0.68
LSG1-202ENST00000427461 BTNL9Q6UXG8 535 aa10.8□□□□□ -0.68
LSG1-202ENST00000427461 SIX5Q8N196 739 aa10.8□□□□□ -0.68
LSG1-202ENST00000427461 CDCA3Q99618 268 aaPredicted RBP10.8□□□□□ -0.68
LSG1-202ENST00000427461 EHMT1Q9H9B1 1298 aa10.8□□□□□ -0.68
LSG1-202ENST00000427461 ZNF287Q9HBT7 754 aa10.8□□□□□ -0.68
LSG1-202ENST00000427461 SETD4Q9NVD3 440 aa10.8□□□□□ -0.68
LSG1-202ENST00000427461 ASPMQ8IZT6 3477 aa10.79□□□□□ -0.68
LSG1-202ENST00000427461 GPR179Q6PRD1 2367 aa10.79□□□□□ -0.68
LSG1-202ENST00000427461 H3BRB1 525 aa10.79□□□□□ -0.68
LSG1-202ENST00000427461 SP9P0CG40 484 aa10.79□□□□□ -0.68
LSG1-202ENST00000427461 USH1GQ495M9 461 aa10.79□□□□□ -0.68
LSG1-202ENST00000427461 PLPP4Q5VZY2 271 aa10.79□□□□□ -0.68
LSG1-202ENST00000427461 KANK3Q6NY19 840 aa10.79□□□□□ -0.68
LSG1-202ENST00000427461 GIMAP6Q6P9H5 292 aa10.79□□□□□ -0.68
LSG1-202ENST00000427461 RTN4RL1Q86UN2 441 aaPredicted RBP10.79□□□□□ -0.68
LSG1-202ENST00000427461 ERC1Q8IUD2 1116 aa10.79□□□□□ -0.68
LSG1-202ENST00000427461 FEZF2Q8TBJ5 459 aa10.79□□□□□ -0.68
LSG1-202ENST00000427461 OSBP2Q969R2 916 aa10.79□□□□□ -0.68
LSG1-202ENST00000427461 SPATA33Q96N06 139 aa10.79□□□□□ -0.68
LSG1-202ENST00000427461 TUT1Q9H6E5 874 aaKnown RBP10.79□□□□□ -0.68
LSG1-202ENST00000427461 HCSTQ9UBK5 93 aa10.79□□□□□ -0.68
LSG1-202ENST00000427461 FAM208BQ5VWN6 2430 aa10.79□□□□□ -0.68
LSG1-202ENST00000427461 FASNP49327 2511 aaKnown RBP10.79□□□□□ -0.68
LSG1-202ENST00000427461 HIDE1A8MVS5 230 aa10.78□□□□□ -0.68
LSG1-202ENST00000427461 STK25O00506 426 aa10.78□□□□□ -0.68
LSG1-202ENST00000427461 FSCN2O14926 492 aa10.78□□□□□ -0.68
LSG1-202ENST00000427461 APPP05067 770 aa10.78□□□□□ -0.68
LSG1-202ENST00000427461 IFIT2P09913 472 aaKnown RBP10.78□□□□□ -0.68
LSG1-202ENST00000427461 SRGAP2BP0DMP2 458 aa10.78□□□□□ -0.68
LSG1-202ENST00000427461 HOXB8P17481 243 aaPredicted RBP10.78□□□□□ -0.68
LSG1-202ENST00000427461 EIF2AK2P19525 551 aaKnown RBP10.78□□□□□ -0.68
LSG1-202ENST00000427461 IBSPP21815 317 aaPredicted RBP10.78□□□□□ -0.68
LSG1-202ENST00000427461 ZDHHC14Q8IZN3 488 aa10.78□□□□□ -0.68
LSG1-202ENST00000427461 TDRD5Q8NAT2 981 aaKnown RBP10.78□□□□□ -0.68
LSG1-202ENST00000427461 SYTL5Q8TDW5 730 aaPredicted RBP10.78□□□□□ -0.68
LSG1-202ENST00000427461 NSUN6Q8TEA1 469 aaKnown RBP10.78□□□□□ -0.68
LSG1-202ENST00000427461 DCAF4Q8WV16 495 aa10.78□□□□□ -0.68
LSG1-202ENST00000427461 BCAS3Q9H6U6 928 aa10.78□□□□□ -0.68
LSG1-202ENST00000427461 TMEM260Q9NX78 707 aa10.78□□□□□ -0.68
LSG1-202ENST00000427461 FBXL21Q9UKT6 434 aa10.78□□□□□ -0.68
LSG1-202ENST00000427461 CDV3Q9UKY7 258 aaKnown RBP10.78□□□□□ -0.68
LSG1-202ENST00000427461 IPO8O15397 1037 aaKnown RBP10.77□□□□□ -0.69
LSG1-202ENST00000427461 FGF18O76093 207 aa10.77□□□□□ -0.69
LSG1-202ENST00000427461 GGPS1O95749 300 aa10.77□□□□□ -0.69
LSG1-202ENST00000427461 LGALS2P05162 132 aa10.77□□□□□ -0.69
LSG1-202ENST00000427461 SP2Q02086 613 aa10.77□□□□□ -0.69
LSG1-202ENST00000427461 UBE3AQ05086 875 aa10.77□□□□□ -0.69
LSG1-202ENST00000427461 MGAT3Q09327 533 aa10.77□□□□□ -0.69
LSG1-202ENST00000427461 SPECC1Q5M775 1068 aa10.77□□□□□ -0.69
LSG1-202ENST00000427461 CELF3Q5SZQ8 465 aaKnown RBP10.77□□□□□ -0.69
LSG1-202ENST00000427461 SPOUT1Q5T280 376 aaKnown RBP10.77□□□□□ -0.69
LSG1-202ENST00000427461 CES5AQ6NT32 575 aa10.77□□□□□ -0.69
LSG1-202ENST00000427461 CEP85Q6P2H3 762 aa10.77□□□□□ -0.69
LSG1-202ENST00000427461 ZC3H14Q6PJT7 736 aaKnown RBP10.77□□□□□ -0.69
LSG1-202ENST00000427461 RUFY4Q6ZNE9 571 aa10.77□□□□□ -0.69
LSG1-202ENST00000427461 CLASRPQ8N2M8 674 aaKnown RBP10.77□□□□□ -0.69
LSG1-202ENST00000427461 C12orf76Q8N812 135 aaPredicted RBP10.77□□□□□ -0.69
LSG1-202ENST00000427461 RASGRP4Q8TDF6 673 aa10.77□□□□□ -0.69
LSG1-202ENST00000427461 ZFP91Q96JP5 570 aaPredicted RBP10.77□□□□□ -0.69
LSG1-202ENST00000427461 RMDN3Q96TC7 470 aa10.77□□□□□ -0.69
LSG1-202ENST00000427461 ADAM7Q9H2U9 754 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms