RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 PPP2R2DQ66LE6 453 aa11.63□□□□□ -0.55
COMMD1-202ENST00000427417 TYW1BQ6NUM6 668 aa11.63□□□□□ -0.55
COMMD1-202ENST00000427417 TNPO1Q92973 898 aaKnown RBP11.63□□□□□ -0.55
COMMD1-202ENST00000427417 MXRA8Q9BRK3 442 aa11.63□□□□□ -0.55
COMMD1-202ENST00000427417 ANO3Q9BYT9 981 aa11.63□□□□□ -0.55
COMMD1-202ENST00000427417 RNPEPQ9H4A4 650 aa11.63□□□□□ -0.55
COMMD1-202ENST00000427417 PPP4R2Q9NY27 417 aa11.63□□□□□ -0.55
COMMD1-202ENST00000427417 ERAP1Q9NZ08 941 aa11.63□□□□□ -0.55
COMMD1-202ENST00000427417 NRCAMQ92823 1304 aa11.62□□□□□ -0.55
COMMD1-202ENST00000427417 ABHD14A-ACY1A0A1B0GW23 586 aa11.62□□□□□ -0.55
COMMD1-202ENST00000427417 ESYT2A0FGR8 921 aa11.62□□□□□ -0.55
COMMD1-202ENST00000427417 RSPH10B2B2RC85 870 aa11.62□□□□□ -0.55
COMMD1-202ENST00000427417 PRPF3O43395 683 aaKnown RBP11.62□□□□□ -0.55
COMMD1-202ENST00000427417 NBNO60934 754 aa11.62□□□□□ -0.55
COMMD1-202ENST00000427417 ATP9AO75110 1047 aa11.62□□□□□ -0.55
COMMD1-202ENST00000427417 ARHGEF15O94989 841 aa11.62□□□□□ -0.55
COMMD1-202ENST00000427417 RSPH10BP0C881 870 aa11.62□□□□□ -0.55
COMMD1-202ENST00000427417 GNA11P29992 359 aa11.62□□□□□ -0.55
COMMD1-202ENST00000427417 ZNF76P36508 570 aa11.62□□□□□ -0.55
COMMD1-202ENST00000427417 IKBKEQ14164 716 aa11.62□□□□□ -0.55
COMMD1-202ENST00000427417 TCTN1Q2MV58 587 aa11.62□□□□□ -0.55
COMMD1-202ENST00000427417 CEP55Q53EZ4 464 aa11.62□□□□□ -0.55
COMMD1-202ENST00000427417 ZNF618Q5T7W0 954 aa11.62□□□□□ -0.55
COMMD1-202ENST00000427417 RUFY3Q7L099 469 aa11.62□□□□□ -0.55
COMMD1-202ENST00000427417 TMCO2Q7Z6W1 182 aaPredicted RBP11.62□□□□□ -0.55
COMMD1-202ENST00000427417 TRIM50Q86XT4 487 aa11.62□□□□□ -0.55
COMMD1-202ENST00000427417 HERC6Q8IVU3 1022 aa11.62□□□□□ -0.55
COMMD1-202ENST00000427417 GLG1Q92896 1179 aa11.62□□□□□ -0.55
COMMD1-202ENST00000427417 SDF4Q9BRK5 362 aa11.62□□□□□ -0.55
COMMD1-202ENST00000427417 SMARCAD1Q9H4L7 1026 aa11.62□□□□□ -0.55
COMMD1-202ENST00000427417 CERS4Q9HA82 394 aa11.62□□□□□ -0.55
COMMD1-202ENST00000427417 C6orf50Q9HD87 102 aa11.62□□□□□ -0.55
COMMD1-202ENST00000427417 JPH1Q9HDC5 661 aaPredicted RBP11.62□□□□□ -0.55
COMMD1-202ENST00000427417 KCNH7Q9NS40 1196 aa11.62□□□□□ -0.55
COMMD1-202ENST00000427417 CYP46A1Q9Y6A2 500 aa11.62□□□□□ -0.55
COMMD1-202ENST00000427417 A0A0C4DFX4 3053 aa11.62□□□□□ -0.55
COMMD1-202ENST00000427417 NFASCO94856 1347 aa11.61□□□□□ -0.55
COMMD1-202ENST00000427417 VCANP13611 3396 aa11.61□□□□□ -0.55
COMMD1-202ENST00000427417 RFXAPO00287 272 aa11.61□□□□□ -0.55
COMMD1-202ENST00000427417 TREHO43280 583 aa11.61□□□□□ -0.55
COMMD1-202ENST00000427417 LGR5O75473 907 aa11.61□□□□□ -0.55
COMMD1-202ENST00000427417 IGFBP4P22692 258 aa11.61□□□□□ -0.55
COMMD1-202ENST00000427417 SREBF1P36956 1147 aa11.61□□□□□ -0.55
COMMD1-202ENST00000427417 CLK2P49760 499 aaKnown RBP11.61□□□□□ -0.55
COMMD1-202ENST00000427417 EVCP57679 992 aa11.61□□□□□ -0.55
COMMD1-202ENST00000427417 WDR5P61964 334 aaKnown RBP11.61□□□□□ -0.55
COMMD1-202ENST00000427417 ARHGAP4P98171 946 aa11.61□□□□□ -0.55
COMMD1-202ENST00000427417 CCDC85BQ15834 202 aaPredicted RBP11.61□□□□□ -0.55
COMMD1-202ENST00000427417 TRAF7Q6Q0C0 670 aa11.61□□□□□ -0.55
COMMD1-202ENST00000427417 SPRED2Q7Z698 418 aa11.61□□□□□ -0.55
COMMD1-202ENST00000427417 CCDC148Q8NFR7 591 aa11.61□□□□□ -0.55
COMMD1-202ENST00000427417 BICD2Q8TD16 824 aa11.61□□□□□ -0.55
COMMD1-202ENST00000427417 PGBD1Q96JS3 809 aa11.61□□□□□ -0.55
COMMD1-202ENST00000427417 RNF26Q9BY78 433 aaPredicted RBP11.61□□□□□ -0.55
COMMD1-202ENST00000427417 TM6SF1Q9BZW5 370 aa11.61□□□□□ -0.55
COMMD1-202ENST00000427417 ZMYND12Q9H0C1 365 aa11.61□□□□□ -0.55
COMMD1-202ENST00000427417 AZI2Q9H6S1 392 aa11.61□□□□□ -0.55
COMMD1-202ENST00000427417 ZSWIM6Q9HCJ5 1215 aa11.61□□□□□ -0.55
COMMD1-202ENST00000427417 SETD4Q9NVD3 440 aa11.61□□□□□ -0.55
COMMD1-202ENST00000427417 PKD2L1Q9P0L9 805 aa11.61□□□□□ -0.55
COMMD1-202ENST00000427417 SLC9A2Q9UBY0 812 aa11.61□□□□□ -0.55
COMMD1-202ENST00000427417 GSTTP1A0A1W2PQM5 241 aa11.6□□□□□ -0.55
COMMD1-202ENST00000427417 TLL1O43897 1013 aa11.6□□□□□ -0.55
COMMD1-202ENST00000427417 EIF5BO60841 1220 aaKnown RBP11.6□□□□□ -0.55
COMMD1-202ENST00000427417 RPLP2P05387 115 aaKnown RBP11.6□□□□□ -0.55
COMMD1-202ENST00000427417 CA3P07451 260 aa11.6□□□□□ -0.55
COMMD1-202ENST00000427417 IFNAR1P17181 557 aa11.6□□□□□ -0.55
COMMD1-202ENST00000427417 PDIA3P30101 505 aaKnown RBP11.6□□□□□ -0.55
COMMD1-202ENST00000427417 PPFIA1Q13136 1202 aa11.6□□□□□ -0.55
COMMD1-202ENST00000427417 TAF2Q6P1X5 1199 aa11.6□□□□□ -0.55
COMMD1-202ENST00000427417 NIPA1Q7RTP0 329 aa11.6□□□□□ -0.55
COMMD1-202ENST00000427417 RSPH3Q86UC2 560 aa11.6□□□□□ -0.55
COMMD1-202ENST00000427417 TRIM22Q8IYM9 498 aa11.6□□□□□ -0.55
COMMD1-202ENST00000427417 REXO1Q8N1G1 1221 aaKnown RBP11.6□□□□□ -0.55
COMMD1-202ENST00000427417 LMBR1Q8WVP7 490 aa11.6□□□□□ -0.55
COMMD1-202ENST00000427417 ZBED2Q9BTP6 218 aa11.6□□□□□ -0.55
COMMD1-202ENST00000427417 TMEM260Q9NX78 707 aa11.6□□□□□ -0.55
COMMD1-202ENST00000427417 CUL9Q8IWT3 2517 aa11.6□□□□□ -0.55
COMMD1-202ENST00000427417 EPOPA6NHQ4 379 aa11.59□□□□□ -0.55
COMMD1-202ENST00000427417 RRN3P2A6NIE6 340 aa11.59□□□□□ -0.55
COMMD1-202ENST00000427417 MEIS1O00470 390 aa11.59□□□□□ -0.55
COMMD1-202ENST00000427417 CYP3A4P08684 503 aa11.59□□□□□ -0.55
COMMD1-202ENST00000427417 MARK3P27448 753 aa11.59□□□□□ -0.55
COMMD1-202ENST00000427417 SLC26A2P50443 739 aa11.59□□□□□ -0.55
COMMD1-202ENST00000427417 CCT2P78371 535 aaKnown RBP11.59□□□□□ -0.55
COMMD1-202ENST00000427417 ADAM17P78536 824 aa11.59□□□□□ -0.55
COMMD1-202ENST00000427417 DEFB103AP81534 67 aa11.59□□□□□ -0.55
COMMD1-202ENST00000427417 SETQ01105 290 aaPredicted RBP11.59□□□□□ -0.55
COMMD1-202ENST00000427417 MBTPS1Q14703 1052 aa11.59□□□□□ -0.55
COMMD1-202ENST00000427417 GRIK4Q16099 956 aa11.59□□□□□ -0.55
COMMD1-202ENST00000427417 JAKMIP3Q5VZ66 844 aa11.59□□□□□ -0.55
COMMD1-202ENST00000427417 CPLX2Q6PUV4 134 aaKnown RBP11.59□□□□□ -0.55
COMMD1-202ENST00000427417 MICALL1Q8N3F8 863 aa11.59□□□□□ -0.55
COMMD1-202ENST00000427417 CYP2W1Q8TAV3 490 aa11.59□□□□□ -0.55
COMMD1-202ENST00000427417 SEPT8Q92599 483 aa11.59□□□□□ -0.55
COMMD1-202ENST00000427417 PHKBQ93100 1093 aa11.59□□□□□ -0.55
COMMD1-202ENST00000427417 ZNF274Q96GC6 653 aaPredicted RBP11.59□□□□□ -0.55
COMMD1-202ENST00000427417 SLC26A6Q9BXS9 759 aa11.59□□□□□ -0.55
COMMD1-202ENST00000427417 AGO4Q9HCK5 861 aaKnown RBP11.59□□□□□ -0.55
COMMD1-202ENST00000427417 LCHNA4D1U4 455 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms