RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 NCF2P19878 526 aaPredicted RBP15.53■□□□□ 0.08
PTPN13-203ENST00000427191 PSMD7P51665 324 aa15.53■□□□□ 0.08
PTPN13-203ENST00000427191 RARS2Q5T160 578 aaKnown RBP15.53■□□□□ 0.08
PTPN13-203ENST00000427191 MYLK4Q86YV6 388 aaPredicted RBP15.53■□□□□ 0.08
PTPN13-203ENST00000427191 OLA1Q9NTK5 396 aaKnown RBP15.53■□□□□ 0.08
PTPN13-203ENST00000427191 TRPC5Q9UL62 973 aaPredicted RBP15.53■□□□□ 0.08
PTPN13-203ENST00000427191 ZBBXA8MT70 800 aa15.53■□□□□ 0.08
PTPN13-203ENST00000427191 KRT16P08779 473 aa15.53■□□□□ 0.08
PTPN13-203ENST00000427191 HSPA2P54652 639 aa15.53■□□□□ 0.08
PTPN13-203ENST00000427191 KLHL38Q2WGJ6 581 aa15.53■□□□□ 0.08
PTPN13-203ENST00000427191 NBPF20Q3BBV1 942 aa15.53■□□□□ 0.08
PTPN13-203ENST00000427191 ABI1Q8IZP0 508 aa15.53■□□□□ 0.08
PTPN13-203ENST00000427191 MPP6Q9NZW5 540 aa15.53■□□□□ 0.08
PTPN13-203ENST00000427191 CCNA1P78396 465 aa15.53■□□□□ 0.08
PTPN13-203ENST00000427191 MAPRE2Q15555 327 aa15.53■□□□□ 0.08
PTPN13-203ENST00000427191 PYROXD1Q8WU10 500 aa15.53■□□□□ 0.08
PTPN13-203ENST00000427191 C19orf44Q9H6X5 657 aa15.53■□□□□ 0.08
PTPN13-203ENST00000427191 MIF4GDA9UHW6 222 aaKnown RBP15.53■□□□□ 0.08
PTPN13-203ENST00000427191 TSTA3Q13630 321 aaPredicted RBP15.53■□□□□ 0.08
PTPN13-203ENST00000427191 FAM133BQ5BKY9 247 aaKnown RBP15.53■□□□□ 0.08
PTPN13-203ENST00000427191 CAPN12Q6ZSI9 719 aa15.53■□□□□ 0.08
PTPN13-203ENST00000427191 DCLK2Q8N568 766 aa15.53■□□□□ 0.08
PTPN13-203ENST00000427191 TGFBRAP1Q8WUH2 860 aa15.53■□□□□ 0.08
PTPN13-203ENST00000427191 STAMBPL1Q96FJ0 436 aa15.53■□□□□ 0.08
PTPN13-203ENST00000427191 FAM89AQ96GI7 184 aa15.53■□□□□ 0.08
PTPN13-203ENST00000427191 A0A1W2PP64 1363 aa15.53■□□□□ 0.08
PTPN13-203ENST00000427191 E2F6O75461 281 aa15.53■□□□□ 0.08
PTPN13-203ENST00000427191 YWHAHQ04917 246 aaPredicted RBP15.53■□□□□ 0.08
PTPN13-203ENST00000427191 MKRN3Q13064 507 aaKnown RBP15.53■□□□□ 0.08
PTPN13-203ENST00000427191 P2RX5Q93086 422 aa15.53■□□□□ 0.08
PTPN13-203ENST00000427191 TMEM63CQ9P1W3 806 aa15.53■□□□□ 0.08
PTPN13-203ENST00000427191 ABL1P00519 1130 aa15.52■□□□□ 0.08
PTPN13-203ENST00000427191 TMED8Q6PL24 325 aaPredicted RBP15.52■□□□□ 0.08
PTPN13-203ENST00000427191 PNMA1Q8ND90 353 aa15.52■□□□□ 0.08
PTPN13-203ENST00000427191 ICA1LQ8NDH6 482 aa15.52■□□□□ 0.08
PTPN13-203ENST00000427191 GCNAQ96QF7 691 aa15.52■□□□□ 0.08
PTPN13-203ENST00000427191 COG4Q9H9E3 785 aa15.52■□□□□ 0.08
PTPN13-203ENST00000427191 ANXA13P27216 316 aa15.52■□□□□ 0.08
PTPN13-203ENST00000427191 CCDC17Q96LX7 622 aa15.52■□□□□ 0.08
PTPN13-203ENST00000427191 PALMDQ9NP74 551 aa15.52■□□□□ 0.08
PTPN13-203ENST00000427191 CLASP1Q7Z460 1538 aa15.52■□□□□ 0.08
PTPN13-203ENST00000427191 PLS3P13797 630 aa15.52■□□□□ 0.08
PTPN13-203ENST00000427191 PLTPP55058 493 aa15.52■□□□□ 0.08
PTPN13-203ENST00000427191 SUFUQ9UMX1 484 aa15.52■□□□□ 0.08
PTPN13-203ENST00000427191 SERPINB4P48594 390 aa15.52■□□□□ 0.07
PTPN13-203ENST00000427191 ZBED6P86452 979 aa15.52■□□□□ 0.07
PTPN13-203ENST00000427191 KIF19Q2TAC6 998 aa15.52■□□□□ 0.07
PTPN13-203ENST00000427191 RBM41Q96IZ5 413 aaKnown RBP15.52■□□□□ 0.07
PTPN13-203ENST00000427191 TRPV6Q9H1D0 765 aa15.52■□□□□ 0.07
PTPN13-203ENST00000427191 CYP26B1Q9NR63 512 aa15.52■□□□□ 0.07
PTPN13-203ENST00000427191 DNMT1P26358 1616 aaKnown RBP15.52■□□□□ 0.07
PTPN13-203ENST00000427191 TIMM10P62072 90 aa15.52■□□□□ 0.07
PTPN13-203ENST00000427191 GPBP1L1Q9HC44 474 aaPredicted RBP15.52■□□□□ 0.07
PTPN13-203ENST00000427191 HSPA4LO95757 839 aa15.52■□□□□ 0.07
PTPN13-203ENST00000427191 CPA1P15085 419 aa15.52■□□□□ 0.07
PTPN13-203ENST00000427191 PPARDQ03181 441 aa15.52■□□□□ 0.07
PTPN13-203ENST00000427191 MRPL28Q13084 256 aaKnown RBP15.52■□□□□ 0.07
PTPN13-203ENST00000427191 PLA2G4DQ86XP0 818 aa15.52■□□□□ 0.07
PTPN13-203ENST00000427191 CASP14P31944 242 aa15.52■□□□□ 0.07
PTPN13-203ENST00000427191 NCLNQ969V3 563 aa15.52■□□□□ 0.07
PTPN13-203ENST00000427191 ABCC10Q5T3U5 1492 aa15.51■□□□□ 0.07
PTPN13-203ENST00000427191 SEMA3FQ13275 785 aa15.51■□□□□ 0.07
PTPN13-203ENST00000427191 AMNQ9BXJ7 453 aa15.51■□□□□ 0.07
PTPN13-203ENST00000427191 CCDC87Q9NVE4 849 aa15.51■□□□□ 0.07
PTPN13-203ENST00000427191 ERBB4Q15303 1308 aa15.51■□□□□ 0.07
PTPN13-203ENST00000427191 KLRF2D3W0D1 207 aa15.51■□□□□ 0.07
PTPN13-203ENST00000427191 CCDC159P0C7I6 412 aa15.51■□□□□ 0.07
PTPN13-203ENST00000427191 BASP1P80723 227 aaKnown RBP15.51■□□□□ 0.07
PTPN13-203ENST00000427191 PTGDRQ13258 359 aa15.51■□□□□ 0.07
PTPN13-203ENST00000427191 HOXC9P31274 260 aa15.51■□□□□ 0.07
PTPN13-203ENST00000427191 FLAD1Q8NFF5 587 aa15.51■□□□□ 0.07
PTPN13-203ENST00000427191 GRAMD1AQ96CP6 724 aa15.51■□□□□ 0.07
PTPN13-203ENST00000427191 EPAS1Q99814 870 aa15.51■□□□□ 0.07
PTPN13-203ENST00000427191 KDM4CQ9H3R0 1056 aa15.51■□□□□ 0.07
PTPN13-203ENST00000427191 SLC52A2Q9HAB3 445 aa15.51■□□□□ 0.07
PTPN13-203ENST00000427191 DIABLOQ9NR28 239 aa15.51■□□□□ 0.07
PTPN13-203ENST00000427191 CTSWP56202 376 aa15.51■□□□□ 0.07
PTPN13-203ENST00000427191 SLC35F6Q8N357 371 aa15.51■□□□□ 0.07
PTPN13-203ENST00000427191 ATP6V0A4Q9HBG4 840 aa15.51■□□□□ 0.07
PTPN13-203ENST00000427191 CCNL1Q9UK58 526 aaPredicted RBP15.51■□□□□ 0.07
PTPN13-203ENST00000427191 ARL4CP56559 192 aa15.51■□□□□ 0.07
PTPN13-203ENST00000427191 GPR162Q16538 588 aa15.51■□□□□ 0.07
PTPN13-203ENST00000427191 PCDHA7Q9UN72 937 aa15.51■□□□□ 0.07
PTPN13-203ENST00000427191 FRMD3A2A2Y4 597 aa15.51■□□□□ 0.07
PTPN13-203ENST00000427191 SLC39A14Q15043 492 aa15.51■□□□□ 0.07
PTPN13-203ENST00000427191 KHDRBS2Q5VWX1 349 aaKnown RBP15.51■□□□□ 0.07
PTPN13-203ENST00000427191 CCNYQ8ND76 341 aa15.51■□□□□ 0.07
PTPN13-203ENST00000427191 H0Y626 953 aa15.5■□□□□ 0.07
PTPN13-203ENST00000427191 TRIM16O95361 564 aa15.5■□□□□ 0.07
PTPN13-203ENST00000427191 SLFN12LQ6IEE8 588 aa15.5■□□□□ 0.07
PTPN13-203ENST00000427191 CEP70Q8NHQ1 597 aa15.5■□□□□ 0.07
PTPN13-203ENST00000427191 PITPNM3Q9BZ71 974 aa15.5■□□□□ 0.07
PTPN13-203ENST00000427191 WARS2Q9UGM6 360 aaKnown RBP15.5■□□□□ 0.07
PTPN13-203ENST00000427191 ZBED1O96006 694 aa15.5■□□□□ 0.07
PTPN13-203ENST00000427191 SIX6OS1Q8N1H7 587 aa15.5■□□□□ 0.07
PTPN13-203ENST00000427191 JAK2O60674 1132 aa15.5■□□□□ 0.07
PTPN13-203ENST00000427191 USP14P54578 494 aa15.5■□□□□ 0.07
PTPN13-203ENST00000427191 SNX19Q92543 992 aa15.5■□□□□ 0.07
PTPN13-203ENST00000427191 DACH2Q96NX9 599 aa15.5■□□□□ 0.07
PTPN13-203ENST00000427191 STRIP2Q9ULQ0 834 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms