RNA–Protein interactions for RNA: ENST00000427187.6

VNN3-208, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-208ENST00000427187 ZBTB5O15062 677 aa10.05□□□□□ -0.8
VNN3-208ENST00000427187 POLR2MP0CAP2 368 aa10.05□□□□□ -0.8
VNN3-208ENST00000427187 SDSP20132 328 aa10.05□□□□□ -0.8
VNN3-208ENST00000427187 DNAJB1P25685 340 aa10.05□□□□□ -0.8
VNN3-208ENST00000427187 NDUFV1P49821 464 aa10.05□□□□□ -0.8
VNN3-208ENST00000427187 MRPS9P82933 396 aaKnown RBP10.05□□□□□ -0.8
VNN3-208ENST00000427187 SMAD4Q13485 552 aaKnown RBP10.05□□□□□ -0.8
VNN3-208ENST00000427187 CAMK1Q14012 370 aa10.05□□□□□ -0.8
VNN3-208ENST00000427187 BTG3Q14201 252 aaPredicted RBP10.05□□□□□ -0.8
VNN3-208ENST00000427187 LPIN1Q14693 890 aa10.05□□□□□ -0.8
VNN3-208ENST00000427187 CCDC178Q5BJE1 867 aa10.05□□□□□ -0.8
VNN3-208ENST00000427187 HERC4Q5GLZ8 1057 aaPredicted RBP10.05□□□□□ -0.8
VNN3-208ENST00000427187 IFIT1BQ5T764 474 aaKnown RBP10.05□□□□□ -0.8
VNN3-208ENST00000427187 APBB2Q92870 758 aa10.05□□□□□ -0.8
VNN3-208ENST00000427187 ZBTB10Q96DT7 871 aa10.05□□□□□ -0.8
VNN3-208ENST00000427187 MTMR8Q96EF0 704 aa10.05□□□□□ -0.8
VNN3-208ENST00000427187 SNX27Q96L92 541 aa10.05□□□□□ -0.8
VNN3-208ENST00000427187 POP1Q99575 1024 aaKnown RBP10.05□□□□□ -0.8
VNN3-208ENST00000427187 UBAC1Q9BSL1 405 aa10.05□□□□□ -0.8
VNN3-208ENST00000427187 C11orf84Q9BUA3 381 aaPredicted RBP10.05□□□□□ -0.8
VNN3-208ENST00000427187 KCNH6Q9H252 994 aa10.05□□□□□ -0.8
VNN3-208ENST00000427187 RC3H2Q9HBD1 1191 aaKnown RBP10.05□□□□□ -0.8
VNN3-208ENST00000427187 FAM86C1Q9NVL1 165 aa10.05□□□□□ -0.8
VNN3-208ENST00000427187 CD207Q9UJ71 328 aa10.05□□□□□ -0.8
VNN3-208ENST00000427187 PCDHGC5Q9Y5F6 944 aa10.05□□□□□ -0.8
VNN3-208ENST00000427187 CACNA1HO95180 2353 aa10.04□□□□□ -0.8
VNN3-208ENST00000427187 TTC3P53804 2025 aa10.04□□□□□ -0.8
VNN3-208ENST00000427187 ZFHX2Q9C0A1 2572 aaPredicted RBP10.04□□□□□ -0.8
VNN3-208ENST00000427187 CAND2O75155 1236 aa10.04□□□□□ -0.8
VNN3-208ENST00000427187 MMP1P03956 469 aa10.04□□□□□ -0.8
VNN3-208ENST00000427187 TGFB3P10600 412 aa10.04□□□□□ -0.8
VNN3-208ENST00000427187 IBSPP21815 317 aaPredicted RBP10.04□□□□□ -0.8
VNN3-208ENST00000427187 MARK3P27448 753 aa10.04□□□□□ -0.8
VNN3-208ENST00000427187 ADAM17P78536 824 aa10.04□□□□□ -0.8
VNN3-208ENST00000427187 PAN2Q504Q3 1202 aaKnown RBP10.04□□□□□ -0.8
VNN3-208ENST00000427187 FAM26DQ5JW98 314 aa10.04□□□□□ -0.8
VNN3-208ENST00000427187 METTL7BQ6UX53 244 aa10.04□□□□□ -0.8
VNN3-208ENST00000427187 CYB5R4Q7L1T6 521 aa10.04□□□□□ -0.8
VNN3-208ENST00000427187 RBM23Q86U06 439 aaKnown RBP10.04□□□□□ -0.8
VNN3-208ENST00000427187 EDAQ92838 391 aa10.04□□□□□ -0.8
VNN3-208ENST00000427187 PBXIP1Q96AQ6 731 aa10.04□□□□□ -0.8
VNN3-208ENST00000427187 USP26Q9BXU7 913 aa10.04□□□□□ -0.8
VNN3-208ENST00000427187 SENP2Q9HC62 589 aa10.04□□□□□ -0.8
VNN3-208ENST00000427187 MRPL42Q9Y6G3 142 aaKnown RBP10.04□□□□□ -0.8
VNN3-208ENST00000427187 KMT2EQ8IZD2 1858 aa10.04□□□□□ -0.8
VNN3-208ENST00000427187 TMEM221A6NGB7 291 aa10.03□□□□□ -0.8
VNN3-208ENST00000427187 SPATA31C2B4DYI2 1134 aa10.03□□□□□ -0.8
VNN3-208ENST00000427187 M0R296 226 aa10.03□□□□□ -0.8
VNN3-208ENST00000427187 ENPP3O14638 875 aa10.03□□□□□ -0.8
VNN3-208ENST00000427187 NCK2O43639 380 aa10.03□□□□□ -0.8
VNN3-208ENST00000427187 CYTH3O43739 400 aa10.03□□□□□ -0.8
VNN3-208ENST00000427187 ITGB1P05556 798 aa10.03□□□□□ -0.8
VNN3-208ENST00000427187 RB1P06400 928 aa10.03□□□□□ -0.8
VNN3-208ENST00000427187 GNAT1P11488 350 aa10.03□□□□□ -0.8
VNN3-208ENST00000427187 GATMP50440 423 aa10.03□□□□□ -0.8
VNN3-208ENST00000427187 MFAP1P55081 439 aaKnown RBP10.03□□□□□ -0.8
VNN3-208ENST00000427187 RBM10P98175 930 aaKnown RBP10.03□□□□□ -0.8
VNN3-208ENST00000427187 MGAT3Q09327 533 aa10.03□□□□□ -0.8
VNN3-208ENST00000427187 TCF15Q12870 199 aa10.03□□□□□ -0.8
VNN3-208ENST00000427187 ADAM15Q13444 863 aa10.03□□□□□ -0.8
VNN3-208ENST00000427187 SEC23AQ15436 765 aa10.03□□□□□ -0.8
VNN3-208ENST00000427187 GNPTABQ3T906 1256 aa10.03□□□□□ -0.8
VNN3-208ENST00000427187 B4GALNT3Q6L9W6 998 aa10.03□□□□□ -0.8
VNN3-208ENST00000427187 TRIM67Q6ZTA4 783 aa10.03□□□□□ -0.8
VNN3-208ENST00000427187 DNAJB3Q8WWF6 145 aa10.03□□□□□ -0.8
VNN3-208ENST00000427187 LINC01599Q8WXQ3 324 aa10.03□□□□□ -0.8
VNN3-208ENST00000427187 CLP1Q92989 425 aaKnown RBP10.03□□□□□ -0.8
VNN3-208ENST00000427187 ZNF689Q96CS4 500 aaPredicted RBP10.03□□□□□ -0.8
VNN3-208ENST00000427187 LMAN2LQ9H0V9 348 aa10.03□□□□□ -0.8
VNN3-208ENST00000427187 IL25Q9H293 177 aa10.03□□□□□ -0.8
VNN3-208ENST00000427187 EHMT1Q9H9B1 1298 aa10.03□□□□□ -0.8
VNN3-208ENST00000427187 PLXNA4Q9HCM2 1894 aa10.03□□□□□ -0.8
VNN3-208ENST00000427187 DIAPH3Q9NSV4 1193 aa10.03□□□□□ -0.8
VNN3-208ENST00000427187 MAP3K20Q9NYL2 800 aaKnown RBP10.03□□□□□ -0.8
VNN3-208ENST00000427187 CLEC1BQ9P126 229 aa10.03□□□□□ -0.8
VNN3-208ENST00000427187 ZNF215Q9UL58 517 aaPredicted RBP10.03□□□□□ -0.8
VNN3-208ENST00000427187 BARX2Q9UMQ3 279 aaPredicted RBP10.03□□□□□ -0.8
VNN3-208ENST00000427187 PLAGL2Q9UPG8 496 aa10.03□□□□□ -0.8
VNN3-208ENST00000427187 LOXHD1Q8IVV2 1947 aa10.03□□□□□ -0.8
VNN3-208ENST00000427187 PALM3A6NDB9 673 aaPredicted RBP10.02□□□□□ -0.81
VNN3-208ENST00000427187 FIBPO43427 364 aa10.02□□□□□ -0.81
VNN3-208ENST00000427187 PPFIA3O75145 1194 aa10.02□□□□□ -0.81
VNN3-208ENST00000427187 DGKIO75912 1065 aa10.02□□□□□ -0.81
VNN3-208ENST00000427187 GLP2RO95838 553 aa10.02□□□□□ -0.81
VNN3-208ENST00000427187 CD52P31358 61 aa10.02□□□□□ -0.81
VNN3-208ENST00000427187 ICAM3P32942 547 aa10.02□□□□□ -0.81
VNN3-208ENST00000427187 TCF7P36402 384 aaPredicted RBP10.02□□□□□ -0.81
VNN3-208ENST00000427187 NRIP1P48552 1158 aa10.02□□□□□ -0.81
VNN3-208ENST00000427187 RRP1P56182 461 aaKnown RBP10.02□□□□□ -0.81
VNN3-208ENST00000427187 IGBP1P78318 339 aa10.02□□□□□ -0.81
VNN3-208ENST00000427187 TMEM62Q0P6H9 643 aa10.02□□□□□ -0.81
VNN3-208ENST00000427187 NEDD9Q14511 834 aa10.02□□□□□ -0.81
VNN3-208ENST00000427187 IMMTQ16891 758 aaKnown RBP10.02□□□□□ -0.81
VNN3-208ENST00000427187 KLHL23Q8NBE8 558 aa10.02□□□□□ -0.81
VNN3-208ENST00000427187 MSLNLQ96KJ4 702 aa10.02□□□□□ -0.81
VNN3-208ENST00000427187 RPGRIP1Q96KN7 1286 aa10.02□□□□□ -0.81
VNN3-208ENST00000427187 INPP4AQ96PE3 977 aaPredicted RBP10.02□□□□□ -0.81
VNN3-208ENST00000427187 KRT23Q9C075 422 aa10.02□□□□□ -0.81
VNN3-208ENST00000427187 AGO3Q9H9G7 860 aaKnown RBP10.02□□□□□ -0.81
VNN3-208ENST00000427187 PKD2L1Q9P0L9 805 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms