RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 CAPRIN2Q6IMN6 1127 aaKnown RBP17.52■□□□□ 0.39
PKP4-205ENST00000426248 CYB5D1Q6P9G0 228 aa17.52■□□□□ 0.39
PKP4-205ENST00000426248 TMTC1Q8IUR5 882 aa17.52■□□□□ 0.39
PKP4-205ENST00000426248 TMEM139Q8IV31 216 aa17.52■□□□□ 0.39
PKP4-205ENST00000426248 FAM167BQ9BTA0 163 aa17.52■□□□□ 0.39
PKP4-205ENST00000426248 BMP2KQ9NSY1 1161 aaPredicted RBP17.52■□□□□ 0.39
PKP4-205ENST00000426248 DDX20Q9UHI6 824 aaKnown RBP17.52■□□□□ 0.39
PKP4-205ENST00000426248 ZNF185O15231 689 aa17.51■□□□□ 0.39
PKP4-205ENST00000426248 KCNA3P22001 575 aa17.51■□□□□ 0.39
PKP4-205ENST00000426248 TRIM68Q6AZZ1 485 aa17.51■□□□□ 0.39
PKP4-205ENST00000426248 CYP26C1Q6V0L0 522 aa17.51■□□□□ 0.39
PKP4-205ENST00000426248 SPDYE1Q8NFV5 336 aaPredicted RBP17.51■□□□□ 0.39
PKP4-205ENST00000426248 PAIP2Q9BPZ3 127 aaKnown RBP17.51■□□□□ 0.39
PKP4-205ENST00000426248 NAA15Q9BXJ9 866 aaKnown RBP17.51■□□□□ 0.39
PKP4-205ENST00000426248 BARHL2Q9NY43 387 aa17.51■□□□□ 0.39
PKP4-205ENST00000426248 PRPF6O94906 941 aaKnown RBP17.51■□□□□ 0.39
PKP4-205ENST00000426248 PAFAH1B1P43034 410 aa17.51■□□□□ 0.39
PKP4-205ENST00000426248 ZBTB5O15062 677 aa17.51■□□□□ 0.39
PKP4-205ENST00000426248 VAV2P52735 878 aa17.51■□□□□ 0.39
PKP4-205ENST00000426248 CALCRLQ16602 461 aa17.51■□□□□ 0.39
PKP4-205ENST00000426248 SPDYE2Q495Y8 402 aa17.51■□□□□ 0.39
PKP4-205ENST00000426248 NAA35Q5VZE5 725 aa17.51■□□□□ 0.39
PKP4-205ENST00000426248 KRT26Q7Z3Y9 468 aa17.51■□□□□ 0.39
PKP4-205ENST00000426248 ZNF473Q8WTR7 871 aaKnown RBP17.51■□□□□ 0.39
PKP4-205ENST00000426248 EPSTI1Q96J88 318 aa17.51■□□□□ 0.39
PKP4-205ENST00000426248 FAM184BQ9ULE4 1060 aa17.51■□□□□ 0.39
PKP4-205ENST00000426248 HGSO14964 777 aaPredicted RBP17.5■□□□□ 0.39
PKP4-205ENST00000426248 CHMP2AO43633 222 aa17.5■□□□□ 0.39
PKP4-205ENST00000426248 ATP1A1P05023 1023 aaKnown RBP17.5■□□□□ 0.39
PKP4-205ENST00000426248 RPS12P25398 132 aaKnown RBP17.5■□□□□ 0.39
PKP4-205ENST00000426248 RNASE9P60153 205 aaKnown RBP17.5■□□□□ 0.39
PKP4-205ENST00000426248 SP4Q02446 784 aa17.5■□□□□ 0.39
PKP4-205ENST00000426248 KCNB1Q14721 858 aa17.5■□□□□ 0.39
PKP4-205ENST00000426248 SYT17Q9BSW7 474 aa17.5■□□□□ 0.39
PKP4-205ENST00000426248 INTS13Q9NVM9 706 aa17.5■□□□□ 0.39
PKP4-205ENST00000426248 CCPG1Q9ULG6 757 aa17.5■□□□□ 0.39
PKP4-205ENST00000426248 COL4A1P02462 1669 aa17.5■□□□□ 0.39
PKP4-205ENST00000426248 FMR1Q06787 632 aaKnown RBP eCLIP17.5■□□□□ 0.392e-6■■■■■ 30.9
PKP4-205ENST00000426248 POSTNQ15063 836 aa17.5■□□□□ 0.39
PKP4-205ENST00000426248 KRT79Q5XKE5 535 aa17.5■□□□□ 0.39
PKP4-205ENST00000426248 SMYD4Q8IYR2 804 aaPredicted RBP17.5■□□□□ 0.39
PKP4-205ENST00000426248 RPUSD2Q8IZ73 545 aaKnown RBP17.5■□□□□ 0.39
PKP4-205ENST00000426248 PALM3A6NDB9 673 aaPredicted RBP17.5■□□□□ 0.39
PKP4-205ENST00000426248 KRT86O43790 486 aa17.5■□□□□ 0.39
PKP4-205ENST00000426248 COL5A3P25940 1745 aaPredicted RBP17.5■□□□□ 0.39
PKP4-205ENST00000426248 PKN1Q16512 942 aa17.5■□□□□ 0.39
PKP4-205ENST00000426248 SYMPKQ92797 1274 aaKnown RBP17.5■□□□□ 0.39
PKP4-205ENST00000426248 TAB2Q9NYJ8 693 aa17.5■□□□□ 0.39
PKP4-205ENST00000426248 MAPK8IP1Q9UQF2 711 aa17.5■□□□□ 0.39
PKP4-205ENST00000426248 GOLGB1Q14789 3259 aaKnown RBP17.5■□□□□ 0.39
PKP4-205ENST00000426248 IRS2Q9Y4H2 1338 aa17.49■□□□□ 0.39
PKP4-205ENST00000426248 MYBL2P10244 700 aa17.49■□□□□ 0.39
PKP4-205ENST00000426248 FKBP1AP62942 108 aaKnown RBP17.49■□□□□ 0.39
PKP4-205ENST00000426248 PRR16Q569H4 304 aa17.49■□□□□ 0.39
PKP4-205ENST00000426248 FERMT2Q96AC1 680 aa17.49■□□□□ 0.39
PKP4-205ENST00000426248 PHF20Q9BVI0 1012 aa17.49■□□□□ 0.39
PKP4-205ENST00000426248 EHMT1Q9H9B1 1298 aa17.49■□□□□ 0.39
PKP4-205ENST00000426248 ETAA1Q9NY74 926 aa17.49■□□□□ 0.39
PKP4-205ENST00000426248 EME2A4GXA9 379 aaPredicted RBP17.49■□□□□ 0.39
PKP4-205ENST00000426248 CXCR5P32302 372 aa17.49■□□□□ 0.39
PKP4-205ENST00000426248 MKRN3Q13064 507 aaKnown RBP17.49■□□□□ 0.39
PKP4-205ENST00000426248 KANK3Q6NY19 840 aa17.49■□□□□ 0.39
PKP4-205ENST00000426248 EHBP1Q8NDI1 1231 aa17.49■□□□□ 0.39
PKP4-205ENST00000426248 BLZF1Q9H2G9 400 aa17.49■□□□□ 0.39
PKP4-205ENST00000426248 NYAP2Q9P242 653 aa17.49■□□□□ 0.39
PKP4-205ENST00000426248 SCN7AQ01118 1682 aa17.49■□□□□ 0.39
PKP4-205ENST00000426248 EGFRP00533 1210 aa17.49■□□□□ 0.39
PKP4-205ENST00000426248 MYCLP12524 364 aaPredicted RBP17.49■□□□□ 0.39
PKP4-205ENST00000426248 LSP1P33241 339 aa17.49■□□□□ 0.39
PKP4-205ENST00000426248 SMTNP53814 917 aa17.49■□□□□ 0.39
PKP4-205ENST00000426248 CCT8L2Q96SF2 557 aa17.49■□□□□ 0.39
PKP4-205ENST00000426248 SPZ1Q9BXG8 430 aa17.49■□□□□ 0.39
PKP4-205ENST00000426248 FBXO28Q9NVF7 368 aa17.49■□□□□ 0.39
PKP4-205ENST00000426248 LRWD1Q9UFC0 647 aa17.49■□□□□ 0.39
PKP4-205ENST00000426248 ASTN2O75129 1339 aaPredicted RBP17.49■□□□□ 0.39
PKP4-205ENST00000426248 ZBED4O75132 1171 aa17.49■□□□□ 0.39
PKP4-205ENST00000426248 NR1D1P20393 614 aa17.49■□□□□ 0.39
PKP4-205ENST00000426248 GALNT17Q6IS24 598 aa17.49■□□□□ 0.39
PKP4-205ENST00000426248 GADL1Q6ZQY3 521 aa17.49■□□□□ 0.39
PKP4-205ENST00000426248 NSMCE1Q8WV22 266 aa17.49■□□□□ 0.39
PKP4-205ENST00000426248 DYDC1Q8WWB3 177 aa17.49■□□□□ 0.39
PKP4-205ENST00000426248 PANX2Q96RD6 677 aa17.49■□□□□ 0.39
PKP4-205ENST00000426248 AS3MTQ9HBK9 375 aa17.49■□□□□ 0.39
PKP4-205ENST00000426248 CYTH3O43739 400 aa17.48■□□□□ 0.39
PKP4-205ENST00000426248 C8orf74Q6P047 294 aa17.48■□□□□ 0.39
PKP4-205ENST00000426248 WDR93Q6P2C0 686 aa17.48■□□□□ 0.39
PKP4-205ENST00000426248 TAX1BP1Q86VP1 789 aa17.48■□□□□ 0.39
PKP4-205ENST00000426248 NLRP14Q86W24 1093 aa17.48■□□□□ 0.39
PKP4-205ENST00000426248 DCAF4Q8WV16 495 aa17.48■□□□□ 0.39
PKP4-205ENST00000426248 PAGR1Q9BTK6 254 aa17.48■□□□□ 0.39
PKP4-205ENST00000426248 VCPKMTQ9H867 229 aa17.48■□□□□ 0.39
PKP4-205ENST00000426248 DDX60Q8IY21 1712 aaKnown RBP17.48■□□□□ 0.39
PKP4-205ENST00000426248 UBXN1Q04323 297 aa17.48■□□□□ 0.39
PKP4-205ENST00000426248 MLKLQ8NB16 471 aa17.48■□□□□ 0.39
PKP4-205ENST00000426248 MRIQ9BWK5 157 aa17.48■□□□□ 0.39
PKP4-205ENST00000426248 JMJD4Q9H9V9 463 aa17.48■□□□□ 0.39
PKP4-205ENST00000426248 TNRC6CQ9HCJ0 1690 aaKnown RBP17.48■□□□□ 0.39
PKP4-205ENST00000426248 DDX39AO00148 427 aaKnown RBP17.48■□□□□ 0.39
PKP4-205ENST00000426248 MFAP3LO75121 409 aa17.48■□□□□ 0.39
PKP4-205ENST00000426248 PPP6R2O75170 966 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms