RNA–Protein interactions for RNA: ENST00000425537.1

HMGB4-201, Transcript of high mobility group box 4, humanhuman

TSL 1 (best)

Gene HMGB4, Length 630 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-201ENST00000425537 DYMQ7RTS9 669 aa10.51□□□□□ -0.73
HMGB4-201ENST00000425537 SAPCD2Q86UD0 394 aa10.51□□□□□ -0.73
HMGB4-201ENST00000425537 CATSPER3Q86XQ3 398 aa10.51□□□□□ -0.73
HMGB4-201ENST00000425537 MYOCDQ8IZQ8 938 aa10.51□□□□□ -0.73
HMGB4-201ENST00000425537 RDM1Q8NG50 284 aa10.51□□□□□ -0.73
HMGB4-201ENST00000425537 NSUN6Q8TEA1 469 aaKnown RBP10.51□□□□□ -0.73
HMGB4-201ENST00000425537 TBC1D5Q92609 795 aa10.51□□□□□ -0.73
HMGB4-201ENST00000425537 CCDC51Q96ER9 411 aa10.51□□□□□ -0.73
HMGB4-201ENST00000425537 RMDN3Q96TC7 470 aa10.51□□□□□ -0.73
HMGB4-201ENST00000425537 JADE2Q9NQC1 790 aa10.51□□□□□ -0.73
HMGB4-201ENST00000425537 RTN4Q9NQC3 1192 aaKnown RBP10.51□□□□□ -0.73
HMGB4-201ENST00000425537 HOMER2Q9NSB8 354 aa10.51□□□□□ -0.73
HMGB4-201ENST00000425537 SPTLC3Q9NUV7 552 aa10.51□□□□□ -0.73
HMGB4-201ENST00000425537 ADD3Q9UEY8 706 aaKnown RBP10.51□□□□□ -0.73
HMGB4-201ENST00000425537 COL4A3BPQ9Y5P4 624 aa10.51□□□□□ -0.73
HMGB4-201ENST00000425537 SNCAIPQ9Y6H5 919 aa10.51□□□□□ -0.73
HMGB4-201ENST00000425537 PFASO15067 1338 aa10.51□□□□□ -0.73
HMGB4-201ENST00000425537 ITIH6Q6UXX5 1313 aa10.51□□□□□ -0.73
HMGB4-201ENST00000425537 E9PMD0 336 aa10.5□□□□□ -0.73
HMGB4-201ENST00000425537 KIF2AO00139 706 aaPredicted RBP10.5□□□□□ -0.73
HMGB4-201ENST00000425537 MED24O75448 989 aa10.5□□□□□ -0.73
HMGB4-201ENST00000425537 OFD1O75665 1012 aa10.5□□□□□ -0.73
HMGB4-201ENST00000425537 GNA14O95837 355 aa10.5□□□□□ -0.73
HMGB4-201ENST00000425537 CYP11B2P19099 503 aa10.5□□□□□ -0.73
HMGB4-201ENST00000425537 STAT3P40763 770 aa10.5□□□□□ -0.73
HMGB4-201ENST00000425537 VEGFBP49765 207 aa10.5□□□□□ -0.73
HMGB4-201ENST00000425537 ZNF157P51786 506 aaPredicted RBP10.5□□□□□ -0.73
HMGB4-201ENST00000425537 COPB1P53618 953 aaKnown RBP10.5□□□□□ -0.73
HMGB4-201ENST00000425537 RPS6P62753 249 aaKnown RBP10.5□□□□□ -0.73
HMGB4-201ENST00000425537 IRX3P78415 501 aaPredicted RBP10.5□□□□□ -0.73
HMGB4-201ENST00000425537 KRT76Q01546 638 aa10.5□□□□□ -0.73
HMGB4-201ENST00000425537 COASYQ13057 564 aa10.5□□□□□ -0.73
HMGB4-201ENST00000425537 PPIL2Q13356 520 aa10.5□□□□□ -0.73
HMGB4-201ENST00000425537 MTMR1Q13613 665 aa10.5□□□□□ -0.73
HMGB4-201ENST00000425537 PGM5Q15124 567 aa10.5□□□□□ -0.73
HMGB4-201ENST00000425537 KRT31Q15323 416 aa10.5□□□□□ -0.73
HMGB4-201ENST00000425537 CCDC144BQ3MJ40 725 aa10.5□□□□□ -0.73
HMGB4-201ENST00000425537 GNPTABQ3T906 1256 aa10.5□□□□□ -0.73
HMGB4-201ENST00000425537 CENPPQ6IPU0 288 aa10.5□□□□□ -0.73
HMGB4-201ENST00000425537 TTI2Q6NXR4 508 aa10.5□□□□□ -0.73
HMGB4-201ENST00000425537 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.5□□□□□ -0.73
HMGB4-201ENST00000425537 FASTKD5Q7L8L6 764 aaKnown RBP10.5□□□□□ -0.73
HMGB4-201ENST00000425537 MIER3Q7Z3K6 550 aa10.5□□□□□ -0.73
HMGB4-201ENST00000425537 GTF3C2Q8WUA4 911 aaPredicted RBP10.5□□□□□ -0.73
HMGB4-201ENST00000425537 CACTINQ8WUQ7 758 aaKnown RBP10.5□□□□□ -0.73
HMGB4-201ENST00000425537 GPRASP2Q96D09 838 aa10.5□□□□□ -0.73
HMGB4-201ENST00000425537 DNAJC19Q96DA6 116 aa10.5□□□□□ -0.73
HMGB4-201ENST00000425537 ZNF830Q96NB3 372 aaPredicted RBP10.5□□□□□ -0.73
HMGB4-201ENST00000425537 NAP1L5Q96NT1 182 aaPredicted RBP10.5□□□□□ -0.73
HMGB4-201ENST00000425537 NUDT12Q9BQG2 462 aa10.5□□□□□ -0.73
HMGB4-201ENST00000425537 NAA15Q9BXJ9 866 aaKnown RBP10.5□□□□□ -0.73
HMGB4-201ENST00000425537 SRRTQ9BXP5 876 aaKnown RBP10.5□□□□□ -0.73
HMGB4-201ENST00000425537 KCNF1Q9H3M0 494 aa10.5□□□□□ -0.73
HMGB4-201ENST00000425537 PXMP2Q9NR77 195 aa10.5□□□□□ -0.73
HMGB4-201ENST00000425537 SEL1LQ9UBV2 794 aa10.5□□□□□ -0.73
HMGB4-201ENST00000425537 A0A1W2PQC6 194 aa10.49□□□□□ -0.73
HMGB4-201ENST00000425537 POTEFA5A3E0 1075 aa10.49□□□□□ -0.73
HMGB4-201ENST00000425537 SPDYE5A6NIY4 337 aa10.49□□□□□ -0.73
HMGB4-201ENST00000425537 AKR1B15C9JRZ8 316 aaPredicted RBP10.49□□□□□ -0.73
HMGB4-201ENST00000425537 P4HBP07237 508 aaKnown RBP10.49□□□□□ -0.73
HMGB4-201ENST00000425537 SPATA31C1P0DKV0 1188 aa10.49□□□□□ -0.73
HMGB4-201ENST00000425537 OSBPP22059 807 aa10.49□□□□□ -0.73
HMGB4-201ENST00000425537 GJA5P36382 358 aa10.49□□□□□ -0.73
HMGB4-201ENST00000425537 DNM2P50570 870 aa10.49□□□□□ -0.73
HMGB4-201ENST00000425537 SLC12A3P55017 1021 aa10.49□□□□□ -0.73
HMGB4-201ENST00000425537 UBXN2AP68543 259 aa10.49□□□□□ -0.73
HMGB4-201ENST00000425537 EHHADHQ08426 723 aa10.49□□□□□ -0.73
HMGB4-201ENST00000425537 STK4Q13043 487 aa10.49□□□□□ -0.73
HMGB4-201ENST00000425537 TSR1Q2NL82 804 aaKnown RBP10.49□□□□□ -0.73
HMGB4-201ENST00000425537 DEFB115Q30KQ5 88 aa10.49□□□□□ -0.73
HMGB4-201ENST00000425537 HERC4Q5GLZ8 1057 aaPredicted RBP10.49□□□□□ -0.73
HMGB4-201ENST00000425537 MUM1L1Q5H9M0 696 aa10.49□□□□□ -0.73
HMGB4-201ENST00000425537 FKBP15Q5T1M5 1219 aa10.49□□□□□ -0.73
HMGB4-201ENST00000425537 POTEGQ6S5H5 508 aa10.49□□□□□ -0.73
HMGB4-201ENST00000425537 POTEEQ6S8J3 1075 aa10.49□□□□□ -0.73
HMGB4-201ENST00000425537 GADL1Q6ZQY3 521 aa10.49□□□□□ -0.73
HMGB4-201ENST00000425537 KCNK18Q7Z418 384 aa10.49□□□□□ -0.73
HMGB4-201ENST00000425537 RASAL3Q86YV0 1011 aa10.49□□□□□ -0.73
HMGB4-201ENST00000425537 CNGA4Q8IV77 575 aa10.49□□□□□ -0.73
HMGB4-201ENST00000425537 TPH2Q8IWU9 490 aa10.49□□□□□ -0.73
HMGB4-201ENST00000425537 REPS2Q8NFH8 660 aa10.49□□□□□ -0.73
HMGB4-201ENST00000425537 DNERQ8NFT8 737 aa10.49□□□□□ -0.73
HMGB4-201ENST00000425537 LRRC15Q8TF66 581 aa10.49□□□□□ -0.73
HMGB4-201ENST00000425537 CAPNS2Q96L46 248 aa10.49□□□□□ -0.73
HMGB4-201ENST00000425537 CEP63Q96MT8 703 aa10.49□□□□□ -0.73
HMGB4-201ENST00000425537 CCDC43Q96MW1 224 aaKnown RBP10.49□□□□□ -0.73
HMGB4-201ENST00000425537 MED15Q96RN5 788 aa10.49□□□□□ -0.73
HMGB4-201ENST00000425537 IWS1Q96ST2 819 aa10.49□□□□□ -0.73
HMGB4-201ENST00000425537 HSD17B14Q9BPX1 270 aa10.49□□□□□ -0.73
HMGB4-201ENST00000425537 PDCD2LQ9BRP1 358 aa10.49□□□□□ -0.73
HMGB4-201ENST00000425537 NUP58Q9BVL2 599 aa10.49□□□□□ -0.73
HMGB4-201ENST00000425537 TIPINQ9BVW5 301 aa10.49□□□□□ -0.73
HMGB4-201ENST00000425537 ZSWIM4Q9H7M6 989 aa10.49□□□□□ -0.73
HMGB4-201ENST00000425537 SLC39A2Q9NP94 309 aa10.49□□□□□ -0.73
HMGB4-201ENST00000425537 KCNH7Q9NS40 1196 aa10.49□□□□□ -0.73
HMGB4-201ENST00000425537 KCND1Q9NSA2 647 aa10.49□□□□□ -0.73
HMGB4-201ENST00000425537 ZNF214Q9UL59 606 aaPredicted RBP10.49□□□□□ -0.73
HMGB4-201ENST00000425537 ODF2LQ9ULJ1 636 aa10.49□□□□□ -0.73
HMGB4-201ENST00000425537 MAPK8IP1Q9UQF2 711 aa10.49□□□□□ -0.73
HMGB4-201ENST00000425537 LOC285556D6RIA3 1793 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms