RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 CALM1P0DP23 149 aa14.1□□□□□ -0.15
HLA-DQB3-203ENST00000425319 CALM2P0DP24 149 aa14.1□□□□□ -0.15
HLA-DQB3-203ENST00000425319 CALM3P0DP25 149 aa14.1□□□□□ -0.15
HLA-DQB3-203ENST00000425319 PPFIA1Q13136 1202 aa14.1□□□□□ -0.15
HLA-DQB3-203ENST00000425319 SYNE3Q6ZMZ3 975 aa14.1□□□□□ -0.15
HLA-DQB3-203ENST00000425319 CYB5R4Q7L1T6 521 aa14.1□□□□□ -0.15
HLA-DQB3-203ENST00000425319 RPAINQ86UA6 219 aa14.1□□□□□ -0.15
HLA-DQB3-203ENST00000425319 ADHFE1Q8IWW8 467 aa14.1□□□□□ -0.15
HLA-DQB3-203ENST00000425319 GPRASP2Q96D09 838 aa14.1□□□□□ -0.15
HLA-DQB3-203ENST00000425319 PSTPIP2Q9H939 334 aa14.1□□□□□ -0.15
HLA-DQB3-203ENST00000425319 LRFN2Q9ULH4 789 aa14.1□□□□□ -0.15
HLA-DQB3-203ENST00000425319 TCF20Q9UGU0 1960 aaKnown RBP14.1□□□□□ -0.15
HLA-DQB3-203ENST00000425319 GBF1Q92538 1859 aa14.1□□□□□ -0.15
HLA-DQB3-203ENST00000425319 PRRC2BQ5JSZ5 2229 aaKnown RBP14.09□□□□□ -0.15
HLA-DQB3-203ENST00000425319 C5orf67F2Z3F1 127 aa14.09□□□□□ -0.15
HLA-DQB3-203ENST00000425319 HOXC8P31273 242 aa14.09□□□□□ -0.15
HLA-DQB3-203ENST00000425319 TCF7P36402 384 aaPredicted RBP14.09□□□□□ -0.15
HLA-DQB3-203ENST00000425319 MRPS9P82933 396 aaKnown RBP14.09□□□□□ -0.15
HLA-DQB3-203ENST00000425319 PKN1Q16512 942 aa14.09□□□□□ -0.15
HLA-DQB3-203ENST00000425319 IL31RAQ8NI17 732 aa14.09□□□□□ -0.15
HLA-DQB3-203ENST00000425319 MTA3Q9BTC8 594 aa14.09□□□□□ -0.15
HLA-DQB3-203ENST00000425319 IGFLR1Q9H665 355 aa14.09□□□□□ -0.15
HLA-DQB3-203ENST00000425319 CD320Q9NPF0 282 aa14.09□□□□□ -0.15
HLA-DQB3-203ENST00000425319 SQORQ9Y6N5 450 aa14.09□□□□□ -0.15
HLA-DQB3-203ENST00000425319 PRUNE2Q8WUY3 3088 aa14.09□□□□□ -0.15
HLA-DQB3-203ENST00000425319 SCN5AQ14524 2016 aa14.08□□□□□ -0.15
HLA-DQB3-203ENST00000425319 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.08□□□□□ -0.16
HLA-DQB3-203ENST00000425319 FSD2A1L4K1 749 aa14.08□□□□□ -0.16
HLA-DQB3-203ENST00000425319 PIK3CDO00329 1044 aa14.08□□□□□ -0.16
HLA-DQB3-203ENST00000425319 ENPP3O14638 875 aa14.08□□□□□ -0.16
HLA-DQB3-203ENST00000425319 DDAH1O94760 285 aa14.08□□□□□ -0.16
HLA-DQB3-203ENST00000425319 GHRP10912 638 aa14.08□□□□□ -0.16
HLA-DQB3-203ENST00000425319 HIC1Q14526 733 aa14.08□□□□□ -0.16
HLA-DQB3-203ENST00000425319 ALYREFQ86V81 257 aaKnown RBP14.08□□□□□ -0.16
HLA-DQB3-203ENST00000425319 MICAL1Q8TDZ2 1067 aa14.08□□□□□ -0.16
HLA-DQB3-203ENST00000425319 LMBR1Q8WVP7 490 aa14.08□□□□□ -0.16
HLA-DQB3-203ENST00000425319 GPKOWQ92917 476 aaPredicted RBP eCLIP14.08□□□□□ -0.16
HLA-DQB3-203ENST00000425319 PRRX2Q99811 253 aa14.08□□□□□ -0.16
HLA-DQB3-203ENST00000425319 SPZ1Q9BXG8 430 aa14.08□□□□□ -0.16
HLA-DQB3-203ENST00000425319 AAASQ9NRG9 546 aa14.08□□□□□ -0.16
HLA-DQB3-203ENST00000425319 TUBE1Q9UJT0 475 aa14.08□□□□□ -0.16
HLA-DQB3-203ENST00000425319 E7EWF7 191 aa14.07□□□□□ -0.16
HLA-DQB3-203ENST00000425319 CYP21A2P08686 494 aa14.07□□□□□ -0.16
HLA-DQB3-203ENST00000425319 NDUFV1P49821 464 aa14.07□□□□□ -0.16
HLA-DQB3-203ENST00000425319 TROAPQ12815 778 aa14.07□□□□□ -0.16
HLA-DQB3-203ENST00000425319 MTMR1Q13613 665 aa14.07□□□□□ -0.16
HLA-DQB3-203ENST00000425319 GRIK4Q16099 956 aa14.07□□□□□ -0.16
HLA-DQB3-203ENST00000425319 SPOUT1Q5T280 376 aaKnown RBP14.07□□□□□ -0.16
HLA-DQB3-203ENST00000425319 TSHZ1Q6ZSZ6 1077 aa14.07□□□□□ -0.16
HLA-DQB3-203ENST00000425319 NME8Q8N427 588 aa14.07□□□□□ -0.16
HLA-DQB3-203ENST00000425319 KHSRPQ92945 711 aaKnown RBP eCLIP14.07□□□□□ -0.16
HLA-DQB3-203ENST00000425319 P2RX5Q93086 422 aa14.07□□□□□ -0.16
HLA-DQB3-203ENST00000425319 SDF4Q9BRK5 362 aa14.07□□□□□ -0.16
HLA-DQB3-203ENST00000425319 CD207Q9UJ71 328 aa14.07□□□□□ -0.16
HLA-DQB3-203ENST00000425319 ADGRA3Q8IWK6 1321 aa14.07□□□□□ -0.16
HLA-DQB3-203ENST00000425319 POTEB3A0JP26 581 aa14.06□□□□□ -0.16
HLA-DQB3-203ENST00000425319 STXBP3O00186 592 aa14.06□□□□□ -0.16
HLA-DQB3-203ENST00000425319 IGHDP01880 384 aa14.06□□□□□ -0.16
HLA-DQB3-203ENST00000425319 CHRNA1P02708 482 aa14.06□□□□□ -0.16
HLA-DQB3-203ENST00000425319 SRGAP2BP0DMP2 458 aa14.06□□□□□ -0.16
HLA-DQB3-203ENST00000425319 IGBP1P78318 339 aa14.06□□□□□ -0.16
HLA-DQB3-203ENST00000425319 MKRN4PQ13434 485 aaPredicted RBP14.06□□□□□ -0.16
HLA-DQB3-203ENST00000425319 USP17L6PQ6QN14 398 aa14.06□□□□□ -0.16
HLA-DQB3-203ENST00000425319 POTEBQ6S5H4 581 aa14.06□□□□□ -0.16
HLA-DQB3-203ENST00000425319 DNAJB3Q8WWF6 145 aa14.06□□□□□ -0.16
HLA-DQB3-203ENST00000425319 TMEM87BQ96K49 555 aa14.06□□□□□ -0.16
HLA-DQB3-203ENST00000425319 TRPC6Q9Y210 931 aa14.06□□□□□ -0.16
HLA-DQB3-203ENST00000425319 PCDHB12Q9Y5F1 795 aa14.06□□□□□ -0.16
HLA-DQB3-203ENST00000425319 EYSQ5T1H1 3165 aa14.06□□□□□ -0.16
HLA-DQB3-203ENST00000425319 TANC1Q9C0D5 1861 aa14.06□□□□□ -0.16
HLA-DQB3-203ENST00000425319 LCTP09848 1927 aa14.05□□□□□ -0.16
HLA-DQB3-203ENST00000425319 CYTH3O43739 400 aa14.05□□□□□ -0.16
HLA-DQB3-203ENST00000425319 MARK3P27448 753 aa14.05□□□□□ -0.16
HLA-DQB3-203ENST00000425319 MCM5P33992 734 aa14.05□□□□□ -0.16
HLA-DQB3-203ENST00000425319 ADAM17P78536 824 aa14.05□□□□□ -0.16
HLA-DQB3-203ENST00000425319 MRPS6P82932 125 aaKnown RBP14.05□□□□□ -0.16
HLA-DQB3-203ENST00000425319 ZP2Q05996 745 aa14.05□□□□□ -0.16
HLA-DQB3-203ENST00000425319 SMAD4Q13485 552 aaKnown RBP14.05□□□□□ -0.16
HLA-DQB3-203ENST00000425319 SMAD2Q15796 467 aaKnown RBP14.05□□□□□ -0.16
HLA-DQB3-203ENST00000425319 TRIM50Q86XT4 487 aa14.05□□□□□ -0.16
HLA-DQB3-203ENST00000425319 NPAS4Q8IUM7 802 aa14.05□□□□□ -0.16
HLA-DQB3-203ENST00000425319 TEX2Q8IWB9 1127 aa14.05□□□□□ -0.16
HLA-DQB3-203ENST00000425319 CMTR2Q8IYT2 770 aaKnown RBP14.05□□□□□ -0.16
HLA-DQB3-203ENST00000425319 CLP1Q92989 425 aaKnown RBP14.05□□□□□ -0.16
HLA-DQB3-203ENST00000425319 C11orf16Q9NQ32 467 aa14.05□□□□□ -0.16
HLA-DQB3-203ENST00000425319 PCDHB7Q9Y5E2 793 aa14.05□□□□□ -0.16
HLA-DQB3-203ENST00000425319 CDY2AQ9Y6F7 541 aa14.05□□□□□ -0.16
HLA-DQB3-203ENST00000425319 FRMPD4Q14CM0 1322 aa14.05□□□□□ -0.16
HLA-DQB3-203ENST00000425319 TRIP12Q14669 1992 aaPredicted RBP14.04□□□□□ -0.16
HLA-DQB3-203ENST00000425319 MBTPS2O43462 519 aa14.04□□□□□ -0.16
HLA-DQB3-203ENST00000425319 DGKIO75912 1065 aa14.04□□□□□ -0.16
HLA-DQB3-203ENST00000425319 FOSP01100 380 aaPredicted RBP14.04□□□□□ -0.16
HLA-DQB3-203ENST00000425319 MMP1P03956 469 aa14.04□□□□□ -0.16
HLA-DQB3-203ENST00000425319 ZNF76P36508 570 aa14.04□□□□□ -0.16
HLA-DQB3-203ENST00000425319 SLC26A2P50443 739 aa14.04□□□□□ -0.16
HLA-DQB3-203ENST00000425319 PAK2Q13177 524 aa14.04□□□□□ -0.16
HLA-DQB3-203ENST00000425319 LPIN1Q14693 890 aa14.04□□□□□ -0.16
HLA-DQB3-203ENST00000425319 FBXO47Q5MNV8 452 aa14.04□□□□□ -0.16
HLA-DQB3-203ENST00000425319 TTC22Q5TAA0 569 aa14.04□□□□□ -0.16
HLA-DQB3-203ENST00000425319 ZNF654Q8IZM8 581 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms