RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 SMIM10L2AP0DMW4 78 aa20.39■□□□□ 0.85
IGHV3-47-201ENST00000425060 SMIM10L2BP0DMW5 78 aa20.39■□□□□ 0.85
IGHV3-47-201ENST00000425060 FDPSP14324 419 aaKnown RBP20.39■□□□□ 0.85
IGHV3-47-201ENST00000425060 ZNF76P36508 570 aa20.39■□□□□ 0.85
IGHV3-47-201ENST00000425060 PTK7Q13308 1070 aa20.39■□□□□ 0.85
IGHV3-47-201ENST00000425060 GPNMBQ14956 572 aa20.39■□□□□ 0.85
IGHV3-47-201ENST00000425060 PLA2G4DQ86XP0 818 aa20.39■□□□□ 0.85
IGHV3-47-201ENST00000425060 RPUSD2Q8IZ73 545 aaKnown RBP20.39■□□□□ 0.85
IGHV3-47-201ENST00000425060 NECAB1Q8N987 351 aa20.39■□□□□ 0.85
IGHV3-47-201ENST00000425060 HERVK_113Q902F9 699 aa20.39■□□□□ 0.85
IGHV3-47-201ENST00000425060 WNT8BQ93098 351 aa20.39■□□□□ 0.85
IGHV3-47-201ENST00000425060 GTF3C6Q969F1 213 aa20.39■□□□□ 0.85
IGHV3-47-201ENST00000425060 PCYT2Q99447 389 aa20.39■□□□□ 0.85
IGHV3-47-201ENST00000425060 TRIP12Q14669 1992 aaPredicted RBP20.39■□□□□ 0.85
IGHV3-47-201ENST00000425060 LGR5O75473 907 aa20.38■□□□□ 0.85
IGHV3-47-201ENST00000425060 ATG7O95352 703 aa20.38■□□□□ 0.85
IGHV3-47-201ENST00000425060 FGBP02675 491 aa20.38■□□□□ 0.85
IGHV3-47-201ENST00000425060 ADAM17P78536 824 aa20.38■□□□□ 0.85
IGHV3-47-201ENST00000425060 GALNT17Q6IS24 598 aa20.38■□□□□ 0.85
IGHV3-47-201ENST00000425060 BLIDQ8IZY5 108 aa20.38■□□□□ 0.85
IGHV3-47-201ENST00000425060 RETREG2Q8NC44 543 aa20.38■□□□□ 0.85
IGHV3-47-201ENST00000425060 AFAP1L1Q8TED9 768 aa20.38■□□□□ 0.85
IGHV3-47-201ENST00000425060 LENG9Q96B70 501 aa20.38■□□□□ 0.85
IGHV3-47-201ENST00000425060 ZNF215Q9UL58 517 aaPredicted RBP20.38■□□□□ 0.85
IGHV3-47-201ENST00000425060 LAMA2P24043 3122 aaKnown RBP20.38■□□□□ 0.85
IGHV3-47-201ENST00000425060 EMSYQ7Z589 1322 aa20.37■□□□□ 0.85
IGHV3-47-201ENST00000425060 C17orf102A2RUQ5 167 aa20.37■□□□□ 0.85
IGHV3-47-201ENST00000425060 RFC2P35250 354 aa20.37■□□□□ 0.85
IGHV3-47-201ENST00000425060 RBM25P49756 843 aaKnown RBP20.37■□□□□ 0.85
IGHV3-47-201ENST00000425060 USP11P51784 963 aa20.37■□□□□ 0.85
IGHV3-47-201ENST00000425060 SMAD3P84022 425 aaKnown RBP20.37■□□□□ 0.85
IGHV3-47-201ENST00000425060 ST3GAL1Q11201 340 aa20.37■□□□□ 0.85
IGHV3-47-201ENST00000425060 TRAF7Q6Q0C0 670 aa20.37■□□□□ 0.85
IGHV3-47-201ENST00000425060 SERINC5Q86VE9 423 aa20.37■□□□□ 0.85
IGHV3-47-201ENST00000425060 SDF4Q9BRK5 362 aa20.37■□□□□ 0.85
IGHV3-47-201ENST00000425060 PHF20Q9BVI0 1012 aa20.37■□□□□ 0.85
IGHV3-47-201ENST00000425060 CXXC1Q9P0U4 656 aaPredicted RBP20.37■□□□□ 0.85
IGHV3-47-201ENST00000425060 KCNJ14Q9UNX9 436 aa20.37■□□□□ 0.85
IGHV3-47-201ENST00000425060 SCN5AQ14524 2016 aa20.37■□□□□ 0.85
IGHV3-47-201ENST00000425060 CCNE2O96020 404 aa20.36■□□□□ 0.85
IGHV3-47-201ENST00000425060 PFKMP08237 780 aa20.36■□□□□ 0.85
IGHV3-47-201ENST00000425060 CKBP12277 381 aa20.36■□□□□ 0.85
IGHV3-47-201ENST00000425060 ACTR2P61160 394 aa20.36■□□□□ 0.85
IGHV3-47-201ENST00000425060 FAM109BQ6ICB4 259 aaPredicted RBP20.36■□□□□ 0.85
IGHV3-47-201ENST00000425060 CCDC155Q8N6L0 562 aa20.36■□□□□ 0.85
IGHV3-47-201ENST00000425060 C22orf23Q9BZE7 217 aa20.36■□□□□ 0.85
IGHV3-47-201ENST00000425060 SMARCAD1Q9H4L7 1026 aa20.36■□□□□ 0.85
IGHV3-47-201ENST00000425060 GJB4Q9NTQ9 266 aa20.36■□□□□ 0.85
IGHV3-47-201ENST00000425060 SETD4Q9NVD3 440 aa20.36■□□□□ 0.85
IGHV3-47-201ENST00000425060 ORC3Q9UBD5 711 aaPredicted RBP20.36■□□□□ 0.85
IGHV3-47-201ENST00000425060 TANC1Q9C0D5 1861 aa20.35■□□□□ 0.85
IGHV3-47-201ENST00000425060 IGKV6D-21A0A0A0MT36 114 aa20.35■□□□□ 0.85
IGHV3-47-201ENST00000425060 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.35■□□□□ 0.85
IGHV3-47-201ENST00000425060 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.35■□□□□ 0.85
IGHV3-47-201ENST00000425060 IPO5O00410 1097 aaKnown RBP20.35■□□□□ 0.85
IGHV3-47-201ENST00000425060 TREHO43280 583 aa20.35■□□□□ 0.85
IGHV3-47-201ENST00000425060 SELPP16109 830 aa20.35■□□□□ 0.85
IGHV3-47-201ENST00000425060 SETQ01105 290 aaPredicted RBP20.35■□□□□ 0.85
IGHV3-47-201ENST00000425060 NSUN7Q8NE18 718 aaKnown RBP20.35■□□□□ 0.85
IGHV3-47-201ENST00000425060 TBCKQ8TEA7 893 aa20.35■□□□□ 0.85
IGHV3-47-201ENST00000425060 ATP6V0A1Q93050 837 aa20.35■□□□□ 0.85
IGHV3-47-201ENST00000425060 ERAP1Q9NZ08 941 aa20.35■□□□□ 0.85
IGHV3-47-201ENST00000425060 NRCAMQ92823 1304 aa20.34■□□□□ 0.85
IGHV3-47-201ENST00000425060 PRR16Q569H4 304 aa20.34■□□□□ 0.85
IGHV3-47-201ENST00000425060 ZNF618Q5T7W0 954 aa20.34■□□□□ 0.85
IGHV3-47-201ENST00000425060 ABHD15Q6UXT9 468 aa20.34■□□□□ 0.85
IGHV3-47-201ENST00000425060 Q7L0L9 218 aa20.34■□□□□ 0.85
IGHV3-47-201ENST00000425060 LRRC8DQ7L1W4 858 aa20.34■□□□□ 0.85
IGHV3-47-201ENST00000425060 OTOP2Q7RTS6 562 aa20.34■□□□□ 0.85
IGHV3-47-201ENST00000425060 DEFB128Q7Z7B8 93 aa20.34■□□□□ 0.85
IGHV3-47-201ENST00000425060 TET1Q8NFU7 2136 aa20.34■□□□□ 0.85
IGHV3-47-201ENST00000425060 LMBR1Q8WVP7 490 aa20.34■□□□□ 0.85
IGHV3-47-201ENST00000425060 ZNF577Q9BSK1 485 aa20.34■□□□□ 0.85
IGHV3-47-201ENST00000425060 TBC1D22BQ9NU19 505 aa20.34■□□□□ 0.85
IGHV3-47-201ENST00000425060 CYP3A7-CYP3A51PA0A087WV96 503 aa20.33■□□□□ 0.85
IGHV3-47-201ENST00000425060 PARNO95453 639 aaKnown RBP20.33■□□□□ 0.85
IGHV3-47-201ENST00000425060 CXCL10P02778 98 aa20.33■□□□□ 0.85
IGHV3-47-201ENST00000425060 GNAT1P11488 350 aa20.33■□□□□ 0.85
IGHV3-47-201ENST00000425060 CYP3A7P24462 503 aa20.33■□□□□ 0.85
IGHV3-47-201ENST00000425060 PLPPR4Q7Z2D5 763 aa20.33■□□□□ 0.85
IGHV3-47-201ENST00000425060 DEFB123Q8N688 67 aa20.33■□□□□ 0.85
IGHV3-47-201ENST00000425060 GLG1Q92896 1179 aa20.33■□□□□ 0.85
IGHV3-47-201ENST00000425060 MBOAT7Q96N66 472 aa20.33■□□□□ 0.85
IGHV3-47-201ENST00000425060 UIMC1Q96RL1 719 aa20.33■□□□□ 0.85
IGHV3-47-201ENST00000425060 LIMCH1Q9UPQ0 1083 aa20.33■□□□□ 0.85
IGHV3-47-201ENST00000425060 DDX39AO00148 427 aaKnown RBP20.32■□□□□ 0.84
IGHV3-47-201ENST00000425060 MSH4O15457 936 aa20.32■□□□□ 0.84
IGHV3-47-201ENST00000425060 NBNO60934 754 aa20.32■□□□□ 0.84
IGHV3-47-201ENST00000425060 MARK3P27448 753 aa20.32■□□□□ 0.84
IGHV3-47-201ENST00000425060 MBTPS1Q14703 1052 aa20.32■□□□□ 0.84
IGHV3-47-201ENST00000425060 Q4G0T1 1027 aa20.32■□□□□ 0.84
IGHV3-47-201ENST00000425060 WASF1Q92558 559 aa20.32■□□□□ 0.84
IGHV3-47-201ENST00000425060 MBLAC1A4D2B0 266 aaPredicted RBP20.31■□□□□ 0.84
IGHV3-47-201ENST00000425060 GRXCR1A8MXD5 290 aa20.31■□□□□ 0.84
IGHV3-47-201ENST00000425060 JAK2O60674 1132 aa20.31■□□□□ 0.84
IGHV3-47-201ENST00000425060 XBP1P17861 261 aa20.31■□□□□ 0.84
IGHV3-47-201ENST00000425060 STAT5BP51692 787 aa20.31■□□□□ 0.84
IGHV3-47-201ENST00000425060 PPFIA1Q13136 1202 aa20.31■□□□□ 0.84
IGHV3-47-201ENST00000425060 PLCB4Q15147 1175 aa20.31■□□□□ 0.84
IGHV3-47-201ENST00000425060 NONOQ15233 471 aaKnown RBP eCLIP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms