RNA–Protein interactions for RNA: ENST00000424192.6

LMO3-206, Transcript of LIM domain only 3, humanhuman

TSL 1 (best)

Gene LMO3, Length 983 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-206ENST00000424192 SNX17Q15036 470 aa13.26□□□□□ -0.29
LMO3-206ENST00000424192 LETM2Q2VYF4 491 aa13.26□□□□□ -0.29
LMO3-206ENST00000424192 CYFIP1Q7L576 1253 aa13.26□□□□□ -0.29
LMO3-206ENST00000424192 OXER1Q8TDS5 423 aa13.26□□□□□ -0.29
LMO3-206ENST00000424192 COPS5Q92905 334 aa13.26□□□□□ -0.29
LMO3-206ENST00000424192 MBOAT7Q96N66 472 aa13.26□□□□□ -0.29
LMO3-206ENST00000424192 RIT2Q99578 217 aa13.26□□□□□ -0.29
LMO3-206ENST00000424192 ZNF577Q9BSK1 485 aa13.26□□□□□ -0.29
LMO3-206ENST00000424192 SENP6Q9GZR1 1112 aaPredicted RBP13.26□□□□□ -0.29
LMO3-206ENST00000424192 SLC9A2Q9UBY0 812 aa13.26□□□□□ -0.29
LMO3-206ENST00000424192 DDX25Q9UHL0 483 aaKnown RBP13.26□□□□□ -0.29
LMO3-206ENST00000424192 ZNF215Q9UL58 517 aaPredicted RBP13.26□□□□□ -0.29
LMO3-206ENST00000424192 TBX3O15119 743 aa13.25□□□□□ -0.29
LMO3-206ENST00000424192 F2P00734 622 aa13.25□□□□□ -0.29
LMO3-206ENST00000424192 MYL3P08590 195 aa13.25□□□□□ -0.29
LMO3-206ENST00000424192 U2AF2P26368 475 aaKnown RBP eCLIP13.25□□□□□ -0.29
LMO3-206ENST00000424192 SP2Q02086 613 aa13.25□□□□□ -0.29
LMO3-206ENST00000424192 GUCY1B3Q02153 619 aa13.25□□□□□ -0.29
LMO3-206ENST00000424192 LARP1BQ659C4 914 aaKnown RBP13.25□□□□□ -0.29
LMO3-206ENST00000424192 SMAP1Q8IYB5 467 aaPredicted RBP13.25□□□□□ -0.29
LMO3-206ENST00000424192 LENG9Q96B70 501 aa13.25□□□□□ -0.29
LMO3-206ENST00000424192 EMSYQ7Z589 1322 aa13.24□□□□□ -0.29
LMO3-206ENST00000424192 ADAMTS3O15072 1205 aa13.24□□□□□ -0.29
LMO3-206ENST00000424192 CCNT1O60563 726 aaKnown RBP13.24□□□□□ -0.29
LMO3-206ENST00000424192 ARP10275 920 aa13.24□□□□□ -0.29
LMO3-206ENST00000424192 PTPN11Q06124 597 aaPredicted RBP13.24□□□□□ -0.29
LMO3-206ENST00000424192 HSDL1Q3SXM5 330 aa13.24□□□□□ -0.29
LMO3-206ENST00000424192 TMEM63BQ5T3F8 832 aa13.24□□□□□ -0.29
LMO3-206ENST00000424192 ZNF746Q6NUN9 644 aaPredicted RBP13.24□□□□□ -0.29
LMO3-206ENST00000424192 CXCL17Q6UXB2 119 aa13.24□□□□□ -0.29
LMO3-206ENST00000424192 SLFN12Q8IYM2 578 aa13.24□□□□□ -0.29
LMO3-206ENST00000424192 RDM1Q8NG50 284 aa13.24□□□□□ -0.29
LMO3-206ENST00000424192 CYP2W1Q8TAV3 490 aa13.24□□□□□ -0.29
LMO3-206ENST00000424192 SEPT1Q8WYJ6 367 aa13.24□□□□□ -0.29
LMO3-206ENST00000424192 TNPO1Q92973 898 aaKnown RBP13.24□□□□□ -0.29
LMO3-206ENST00000424192 VTI1AQ96AJ9 217 aa13.24□□□□□ -0.29
LMO3-206ENST00000424192 FAM20AQ96MK3 541 aa13.24□□□□□ -0.29
LMO3-206ENST00000424192 TEKT3Q9BXF9 490 aa13.24□□□□□ -0.29
LMO3-206ENST00000424192 TSHZ2Q9NRE2 1034 aa13.24□□□□□ -0.29
LMO3-206ENST00000424192 NR2E3Q9Y5X4 410 aa13.24□□□□□ -0.29
LMO3-206ENST00000424192 TLR3O15455 904 aaKnown RBP13.23□□□□□ -0.29
LMO3-206ENST00000424192 NEMFO60524 1076 aa13.23□□□□□ -0.29
LMO3-206ENST00000424192 GAS7O60861 476 aa13.23□□□□□ -0.29
LMO3-206ENST00000424192 DTNBO60941 627 aa13.23□□□□□ -0.29
LMO3-206ENST00000424192 BAG4O95429 457 aaKnown RBP13.23□□□□□ -0.29
LMO3-206ENST00000424192 TDP2O95551 362 aa13.23□□□□□ -0.29
LMO3-206ENST00000424192 SFNP31947 248 aa13.23□□□□□ -0.29
LMO3-206ENST00000424192 SLC26A2P50443 739 aa13.23□□□□□ -0.29
LMO3-206ENST00000424192 JAK3P52333 1124 aa13.23□□□□□ -0.29
LMO3-206ENST00000424192 ITGB3BPQ13352 177 aaPredicted RBP13.23□□□□□ -0.29
LMO3-206ENST00000424192 RILPL1Q5EBL4 403 aa13.23□□□□□ -0.29
LMO3-206ENST00000424192 LRCH2Q5VUJ6 765 aa13.23□□□□□ -0.29
LMO3-206ENST00000424192 MCTP1Q6DN14 999 aa13.23□□□□□ -0.29
LMO3-206ENST00000424192 NFRKBQ6P4R8 1299 aa13.23□□□□□ -0.29
LMO3-206ENST00000424192 SLC39A5Q6ZMH5 540 aa13.23□□□□□ -0.29
LMO3-206ENST00000424192 BRAPQ7Z569 592 aa13.23□□□□□ -0.29
LMO3-206ENST00000424192 SLC5A5Q92911 643 aa13.23□□□□□ -0.29
LMO3-206ENST00000424192 FERMT2Q96AC1 680 aa13.23□□□□□ -0.29
LMO3-206ENST00000424192 TOX2Q96NM4 488 aa13.23□□□□□ -0.29
LMO3-206ENST00000424192 GPR20Q99678 358 aa13.23□□□□□ -0.29
LMO3-206ENST00000424192 AZI2Q9H6S1 392 aa13.23□□□□□ -0.29
LMO3-206ENST00000424192 PKD2L1Q9P0L9 805 aa13.23□□□□□ -0.29
LMO3-206ENST00000424192 SCN10AQ9Y5Y9 1956 aa13.23□□□□□ -0.29
LMO3-206ENST00000424192 DCDC2CA8MYV0 355 aa13.22□□□□□ -0.29
LMO3-206ENST00000424192 WDR64B1ANS9 1081 aa13.22□□□□□ -0.29
LMO3-206ENST00000424192 ARVCFO00192 962 aa13.22□□□□□ -0.29
LMO3-206ENST00000424192 MSH4O15457 936 aa13.22□□□□□ -0.29
LMO3-206ENST00000424192 MARCH6O60337 910 aa13.22□□□□□ -0.29
LMO3-206ENST00000424192 EVI5O60447 810 aa13.22□□□□□ -0.29
LMO3-206ENST00000424192 ATP9AO75110 1047 aa13.22□□□□□ -0.29
LMO3-206ENST00000424192 LGALS2P05162 132 aa13.22□□□□□ -0.29
LMO3-206ENST00000424192 TCF7P36402 384 aaPredicted RBP13.22□□□□□ -0.29
LMO3-206ENST00000424192 RTP1P59025 263 aa13.22□□□□□ -0.29
LMO3-206ENST00000424192 ACTR2P61160 394 aa13.22□□□□□ -0.29
LMO3-206ENST00000424192 SP4Q02446 784 aa13.22□□□□□ -0.29
LMO3-206ENST00000424192 ITGA7Q13683 1181 aa13.22□□□□□ -0.29
LMO3-206ENST00000424192 FAM160B1Q5W0V3 765 aa13.22□□□□□ -0.29
LMO3-206ENST00000424192 MIS18BP1Q6P0N0 1132 aa13.22□□□□□ -0.29
LMO3-206ENST00000424192 ANKRD33Q7Z3H0 272 aa13.22□□□□□ -0.29
LMO3-206ENST00000424192 SESTD1Q86VW0 696 aa13.22□□□□□ -0.29
LMO3-206ENST00000424192 SLC43A3Q8NBI5 491 aa13.22□□□□□ -0.29
LMO3-206ENST00000424192 ETNPPLQ8TBG4 499 aa13.22□□□□□ -0.29
LMO3-206ENST00000424192 KCNMB3Q9NPA1 279 aa13.22□□□□□ -0.29
LMO3-206ENST00000424192 VPS37CA5D8V6 355 aaPredicted RBP13.21□□□□□ -0.29
LMO3-206ENST00000424192 LAD1O00515 517 aa13.21□□□□□ -0.29
LMO3-206ENST00000424192 SLC37A4O43826 429 aa13.21□□□□□ -0.29
LMO3-206ENST00000424192 SUPT20HL2P0C7V6 817 aa13.21□□□□□ -0.29
LMO3-206ENST00000424192 ZNF286BP0CG31 522 aa13.21□□□□□ -0.29
LMO3-206ENST00000424192 PTGS1P23219 599 aa13.21□□□□□ -0.29
LMO3-206ENST00000424192 PSEN2P49810 448 aa13.21□□□□□ -0.29
LMO3-206ENST00000424192 MFSD10Q14728 455 aa13.21□□□□□ -0.29
LMO3-206ENST00000424192 CALCRLQ16602 461 aa13.21□□□□□ -0.29
LMO3-206ENST00000424192 LRRC26Q2I0M4 334 aa13.21□□□□□ -0.29
LMO3-206ENST00000424192 TTC38Q5R3I4 469 aa13.21□□□□□ -0.29
LMO3-206ENST00000424192 SMARCAD1Q9H4L7 1026 aa13.21□□□□□ -0.29
LMO3-206ENST00000424192 ERAP1Q9NZ08 941 aa13.21□□□□□ -0.29
LMO3-206ENST00000424192 PRKAG2Q9UGJ0 569 aa13.21□□□□□ -0.29
LMO3-206ENST00000424192 ATP11BQ9Y2G3 1177 aa13.21□□□□□ -0.29
LMO3-206ENST00000424192 FAM205CA6NFA0 338 aa13.2□□□□□ -0.3
LMO3-206ENST00000424192 H3BRB1 525 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms