RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 EPB41L2O43491 1005 aaKnown RBP3.6□□□□□ -1.83
PMS1-209ENST00000424059 ZNF500O60304 480 aaPredicted RBP3.6□□□□□ -1.83
PMS1-209ENST00000424059 DGKIO75912 1065 aa3.6□□□□□ -1.83
PMS1-209ENST00000424059 MAP4K4O95819 1239 aaPredicted RBP3.6□□□□□ -1.83
PMS1-209ENST00000424059 CYP1A1P04798 512 aaPredicted RBP3.6□□□□□ -1.83
PMS1-209ENST00000424059 STAT5AP42229 794 aa3.6□□□□□ -1.83
PMS1-209ENST00000424059 MAP4K2Q12851 820 aa3.6□□□□□ -1.83
PMS1-209ENST00000424059 MTA1Q13330 715 aa3.6□□□□□ -1.83
PMS1-209ENST00000424059 HDAC1Q13547 482 aaPredicted RBP3.6□□□□□ -1.83
PMS1-209ENST00000424059 FXNQ16595 210 aa3.6□□□□□ -1.83
PMS1-209ENST00000424059 SV2CQ496J9 727 aa3.6□□□□□ -1.83
PMS1-209ENST00000424059 MCTP2Q6DN12 878 aa3.6□□□□□ -1.83
PMS1-209ENST00000424059 ZNF280DQ6N043 979 aa3.6□□□□□ -1.83
PMS1-209ENST00000424059 RSPO2Q6UXX9 243 aaPredicted RBP3.6□□□□□ -1.83
PMS1-209ENST00000424059 MBD6Q96DN6 1003 aa3.6□□□□□ -1.83
PMS1-209ENST00000424059 FEZ2Q9UHY8 353 aaPredicted RBP3.6□□□□□ -1.83
PMS1-209ENST00000424059 NPFFR2Q9Y5X5 522 aa3.6□□□□□ -1.83
PMS1-209ENST00000424059 WASHC2CQ9Y4E1 1318 aa3.59□□□□□ -1.83
PMS1-209ENST00000424059 SMAD7O15105 426 aaKnown RBP3.59□□□□□ -1.83
PMS1-209ENST00000424059 PEX14O75381 377 aa3.59□□□□□ -1.83
PMS1-209ENST00000424059 IL13P35225 146 aa3.59□□□□□ -1.83
PMS1-209ENST00000424059 ECI1P42126 302 aa3.59□□□□□ -1.83
PMS1-209ENST00000424059 TEPPQ6URK8 271 aa3.59□□□□□ -1.83
PMS1-209ENST00000424059 CCDC103Q8IW40 242 aa3.59□□□□□ -1.83
PMS1-209ENST00000424059 FAM43AQ8N2R8 423 aa3.59□□□□□ -1.83
PMS1-209ENST00000424059 MSL3Q8N5Y2 521 aaKnown RBP3.59□□□□□ -1.83
PMS1-209ENST00000424059 RCBTB1Q8NDN9 531 aa3.59□□□□□ -1.83
PMS1-209ENST00000424059 PDGFDQ9GZP0 370 aaPredicted RBP3.59□□□□□ -1.83
PMS1-209ENST00000424059 ACBD3Q9H3P7 528 aa3.59□□□□□ -1.83
PMS1-209ENST00000424059 YY1AP1Q9H869 796 aa3.59□□□□□ -1.83
PMS1-209ENST00000424059 MAGEC2Q9UBF1 373 aaPredicted RBP3.59□□□□□ -1.83
PMS1-209ENST00000424059 FTSJ1Q9UET6 329 aa3.59□□□□□ -1.83
PMS1-209ENST00000424059 TMEFF2Q9UIK5 374 aaPredicted RBP3.59□□□□□ -1.83
PMS1-209ENST00000424059 PNMA2Q9UL42 364 aa3.59□□□□□ -1.83
PMS1-209ENST00000424059 NPEPPSL1A6NEC2 478 aa3.58□□□□□ -1.84
PMS1-209ENST00000424059 VGLL3A8MV65 326 aa3.58□□□□□ -1.84
PMS1-209ENST00000424059 KRIT1O00522 736 aa3.58□□□□□ -1.84
PMS1-209ENST00000424059 DHX16O60231 1041 aaKnown RBP3.58□□□□□ -1.84
PMS1-209ENST00000424059 B4GALT3O60512 393 aa3.58□□□□□ -1.84
PMS1-209ENST00000424059 CAPNS1P04632 268 aa3.58□□□□□ -1.84
PMS1-209ENST00000424059 SSBP05455 408 aaKnown RBP eCLIP3.58□□□□□ -1.84
PMS1-209ENST00000424059 KCNJ6P48051 423 aa3.58□□□□□ -1.84
PMS1-209ENST00000424059 SLC35F1Q5T1Q4 408 aa3.58□□□□□ -1.84
PMS1-209ENST00000424059 NBPF6Q5VWK0 638 aa3.58□□□□□ -1.84
PMS1-209ENST00000424059 C6orf15Q6UXA7 325 aaPredicted RBP3.58□□□□□ -1.84
PMS1-209ENST00000424059 ARHGEF18Q6ZSZ5 1173 aa3.58□□□□□ -1.84
PMS1-209ENST00000424059 EEPD1Q7L9B9 569 aa3.58□□□□□ -1.84
PMS1-209ENST00000424059 CIR1Q86X95 450 aaPredicted RBP3.58□□□□□ -1.84
PMS1-209ENST00000424059 NBPF5PQ86XG9 351 aaPredicted RBP3.58□□□□□ -1.84
PMS1-209ENST00000424059 SMC5Q8IY18 1101 aa3.58□□□□□ -1.84
PMS1-209ENST00000424059 NGEFQ8N5V2 710 aa3.58□□□□□ -1.84
PMS1-209ENST00000424059 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.58□□□□□ -1.84
PMS1-209ENST00000424059 NBPF4Q96M43 638 aa3.58□□□□□ -1.84
PMS1-209ENST00000424059 MAF1Q9H063 256 aa3.58□□□□□ -1.84
PMS1-209ENST00000424059 BARX1Q9HBU1 254 aaPredicted RBP3.58□□□□□ -1.84
PMS1-209ENST00000424059 CLDND1Q9NY35 253 aa3.58□□□□□ -1.84
PMS1-209ENST00000424059 PPP4R1LQ9P1A2 415 aa3.58□□□□□ -1.84
PMS1-209ENST00000424059 MYOTQ9UBF9 498 aa3.58□□□□□ -1.84
PMS1-209ENST00000424059 AKAP8O43823 692 aaKnown RBP3.58□□□□□ -1.84
PMS1-209ENST00000424059 CREB3O43889 395 aa3.58□□□□□ -1.84
PMS1-209ENST00000424059 HSP90AA1P07900 732 aaKnown RBP3.58□□□□□ -1.84
PMS1-209ENST00000424059 TACR2P21452 398 aa3.58□□□□□ -1.84
PMS1-209ENST00000424059 PAX3P23760 479 aa3.58□□□□□ -1.84
PMS1-209ENST00000424059 SELENOPP49908 381 aa3.58□□□□□ -1.84
PMS1-209ENST00000424059 PPP2CBP62714 309 aa3.58□□□□□ -1.84
PMS1-209ENST00000424059 PPP2CAP67775 309 aa3.58□□□□□ -1.84
PMS1-209ENST00000424059 GNL2Q13823 731 aaKnown RBP3.58□□□□□ -1.84
PMS1-209ENST00000424059 UTP14CQ5TAP6 766 aaKnown RBP3.58□□□□□ -1.84
PMS1-209ENST00000424059 CCDC181Q5TID7 509 aa3.58□□□□□ -1.84
PMS1-209ENST00000424059 SLFN13Q68D06 897 aa3.58□□□□□ -1.84
PMS1-209ENST00000424059 USP51Q70EK9 711 aa3.58□□□□□ -1.84
PMS1-209ENST00000424059 GET4Q7L5D6 327 aaPredicted RBP3.58□□□□□ -1.84
PMS1-209ENST00000424059 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.58□□□□□ -1.84
PMS1-209ENST00000424059 DNERQ8NFT8 737 aa3.58□□□□□ -1.84
PMS1-209ENST00000424059 KCTD13Q8WZ19 329 aa3.58□□□□□ -1.84
PMS1-209ENST00000424059 C1orf159Q96HA4 380 aa3.58□□□□□ -1.84
PMS1-209ENST00000424059 DRC1Q96MC2 740 aa3.58□□□□□ -1.84
PMS1-209ENST00000424059 SEC61A2Q9H9S3 476 aa3.58□□□□□ -1.84
PMS1-209ENST00000424059 GPR27Q9NS67 375 aa3.58□□□□□ -1.84
PMS1-209ENST00000424059 RAI14Q9P0K7 980 aa3.58□□□□□ -1.84
PMS1-209ENST00000424059 ARNTLO00327 626 aa3.57□□□□□ -1.84
PMS1-209ENST00000424059 CYR61O00622 381 aa3.57□□□□□ -1.84
PMS1-209ENST00000424059 LRG1P02750 347 aa3.57□□□□□ -1.84
PMS1-209ENST00000424059 ANP32AP39687 249 aaKnown RBP3.57□□□□□ -1.84
PMS1-209ENST00000424059 MAP2K1Q02750 393 aaPredicted RBP3.57□□□□□ -1.84
PMS1-209ENST00000424059 ZKSCAN8Q15776 578 aaPredicted RBP3.57□□□□□ -1.84
PMS1-209ENST00000424059 ZKSCAN2Q63HK3 967 aa3.57□□□□□ -1.84
PMS1-209ENST00000424059 LARP1BQ659C4 914 aaKnown RBP3.57□□□□□ -1.84
PMS1-209ENST00000424059 SMAP1Q8IYB5 467 aaPredicted RBP3.57□□□□□ -1.84
PMS1-209ENST00000424059 TMEM145Q8NBT3 493 aa3.57□□□□□ -1.84
PMS1-209ENST00000424059 ATL2Q8NHH9 583 aa3.57□□□□□ -1.84
PMS1-209ENST00000424059 ZCCHC14Q8WYQ9 949 aaKnown RBP3.57□□□□□ -1.84
PMS1-209ENST00000424059 ZFYVE21Q9BQ24 234 aa3.57□□□□□ -1.84
PMS1-209ENST00000424059 PCGF6Q9BYE7 350 aa3.57□□□□□ -1.84
PMS1-209ENST00000424059 CD248Q9HCU0 757 aa3.57□□□□□ -1.84
PMS1-209ENST00000424059 DLL4Q9NR61 685 aa3.57□□□□□ -1.84
PMS1-209ENST00000424059 GEMIN8Q9NWZ8 242 aaKnown RBP3.57□□□□□ -1.84
PMS1-209ENST00000424059 KIAA1522Q9P206 1035 aaPredicted RBP3.57□□□□□ -1.84
PMS1-209ENST00000424059 ASH2LQ9UBL3 628 aa3.57□□□□□ -1.84
PMS1-209ENST00000424059 PCDHA2Q9Y5H9 948 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms