RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 MARCH6O60337 910 aa10.97□□□□□ -0.65
HERC3-204ENST00000422770 F2P00734 622 aa10.97□□□□□ -0.65
HERC3-204ENST00000422770 TIMP1P01033 207 aa10.97□□□□□ -0.65
HERC3-204ENST00000422770 CD4P01730 458 aa10.97□□□□□ -0.65
HERC3-204ENST00000422770 CYP3A4P08684 503 aa10.97□□□□□ -0.65
HERC3-204ENST00000422770 FDPSP14324 419 aaKnown RBP10.97□□□□□ -0.65
HERC3-204ENST00000422770 ITGB8P26012 769 aa10.97□□□□□ -0.65
HERC3-204ENST00000422770 LETM2Q2VYF4 491 aa10.97□□□□□ -0.65
HERC3-204ENST00000422770 GDF6Q6KF10 455 aaPredicted RBP10.97□□□□□ -0.65
HERC3-204ENST00000422770 TMEM199Q8N511 208 aa10.97□□□□□ -0.65
HERC3-204ENST00000422770 CCDC155Q8N6L0 562 aa10.97□□□□□ -0.65
HERC3-204ENST00000422770 SLC43A3Q8NBI5 491 aa10.97□□□□□ -0.65
HERC3-204ENST00000422770 RETREG2Q8NC44 543 aa10.97□□□□□ -0.65
HERC3-204ENST00000422770 DAGLBQ8NCG7 672 aa10.97□□□□□ -0.65
HERC3-204ENST00000422770 OXER1Q8TDS5 423 aa10.97□□□□□ -0.65
HERC3-204ENST00000422770 SEPT1Q8WYJ6 367 aa10.97□□□□□ -0.65
HERC3-204ENST00000422770 AZI2Q9H6S1 392 aa10.97□□□□□ -0.65
HERC3-204ENST00000422770 UMODL1Q5DID0 1318 aa10.97□□□□□ -0.65
HERC3-204ENST00000422770 NFASCO94856 1347 aa10.96□□□□□ -0.65
HERC3-204ENST00000422770 C17orf102A2RUQ5 167 aa10.96□□□□□ -0.65
HERC3-204ENST00000422770 MEIS1O00470 390 aa10.96□□□□□ -0.65
HERC3-204ENST00000422770 CHMP2AO43633 222 aa10.96□□□□□ -0.65
HERC3-204ENST00000422770 TDP2O95551 362 aa10.96□□□□□ -0.65
HERC3-204ENST00000422770 SMIM10L2AP0DMW4 78 aa10.96□□□□□ -0.65
HERC3-204ENST00000422770 SMIM10L2BP0DMW5 78 aa10.96□□□□□ -0.65
HERC3-204ENST00000422770 ACTR2P61160 394 aa10.96□□□□□ -0.65
HERC3-204ENST00000422770 IGBP1P78318 339 aa10.96□□□□□ -0.65
HERC3-204ENST00000422770 HMGN5P82970 282 aaKnown RBP10.96□□□□□ -0.65
HERC3-204ENST00000422770 PTPN11Q06124 597 aaPredicted RBP10.96□□□□□ -0.65
HERC3-204ENST00000422770 ITGB3BPQ13352 177 aaPredicted RBP10.96□□□□□ -0.65
HERC3-204ENST00000422770 PPIGQ13427 754 aaKnown RBP eCLIP10.96□□□□□ -0.65
HERC3-204ENST00000422770 CUL4AQ13619 759 aa10.96□□□□□ -0.65
HERC3-204ENST00000422770 SAFBQ15424 915 aaKnown RBP eCLIP10.96□□□□□ -0.65
HERC3-204ENST00000422770 KRT40Q6A162 431 aa10.96□□□□□ -0.65
HERC3-204ENST00000422770 NIPA1Q7RTP0 329 aa10.96□□□□□ -0.65
HERC3-204ENST00000422770 TRMT1LQ7Z2T5 733 aaKnown RBP10.96□□□□□ -0.65
HERC3-204ENST00000422770 CKAP2LQ8IYA6 745 aa10.96□□□□□ -0.65
HERC3-204ENST00000422770 TDHQ8IZJ6 230 aa10.96□□□□□ -0.65
HERC3-204ENST00000422770 FAM177A1Q8N128 213 aaPredicted RBP10.96□□□□□ -0.65
HERC3-204ENST00000422770 SCLYQ96I15 445 aa10.96□□□□□ -0.65
HERC3-204ENST00000422770 C8orf76Q96K31 380 aa10.96□□□□□ -0.65
HERC3-204ENST00000422770 C16orf70Q9BSU1 422 aa10.96□□□□□ -0.65
HERC3-204ENST00000422770 NOC4LQ9BVI4 516 aaKnown RBP10.96□□□□□ -0.65
HERC3-204ENST00000422770 GTF2IRD1Q9UHL9 959 aa10.96□□□□□ -0.65
HERC3-204ENST00000422770 SMC3Q9UQE7 1217 aa10.96□□□□□ -0.65
HERC3-204ENST00000422770 TRPC6Q9Y210 931 aa10.96□□□□□ -0.65
HERC3-204ENST00000422770 DNAH12Q6ZR08 3092 aa10.96□□□□□ -0.66
HERC3-204ENST00000422770 IGLV3-22A0A075B6J6 115 aa10.95□□□□□ -0.66
HERC3-204ENST00000422770 GSTTP1A0A1W2PQM5 241 aa10.95□□□□□ -0.66
HERC3-204ENST00000422770 CCNT1O60563 726 aaKnown RBP10.95□□□□□ -0.66
HERC3-204ENST00000422770 GAS7O60861 476 aa10.95□□□□□ -0.66
HERC3-204ENST00000422770 MMP1P03956 469 aa10.95□□□□□ -0.66
HERC3-204ENST00000422770 ACRP10323 421 aa10.95□□□□□ -0.66
HERC3-204ENST00000422770 HOXD8P13378 290 aaPredicted RBP10.95□□□□□ -0.66
HERC3-204ENST00000422770 CSF2RAP15509 400 aa10.95□□□□□ -0.66
HERC3-204ENST00000422770 ATP2B1P20020 1258 aa10.95□□□□□ -0.66
HERC3-204ENST00000422770 FXR1P51114 621 aaKnown RBP eCLIP10.95□□□□□ -0.66
HERC3-204ENST00000422770 USP11P51784 963 aa10.95□□□□□ -0.66
HERC3-204ENST00000422770 ZNF200P98182 395 aaPredicted RBP10.95□□□□□ -0.66
HERC3-204ENST00000422770 NR5A1Q13285 461 aa10.95□□□□□ -0.66
HERC3-204ENST00000422770 BFSP2Q13515 415 aa10.95□□□□□ -0.66
HERC3-204ENST00000422770 LRCH2Q5VUJ6 765 aa10.95□□□□□ -0.66
HERC3-204ENST00000422770 FAM160B1Q5W0V3 765 aa10.95□□□□□ -0.66
HERC3-204ENST00000422770 MFSD5Q6N075 450 aa10.95□□□□□ -0.66
HERC3-204ENST00000422770 DEFB128Q7Z7B8 93 aa10.95□□□□□ -0.66
HERC3-204ENST00000422770 NEK8Q86SG6 692 aa10.95□□□□□ -0.66
HERC3-204ENST00000422770 DIS3L2Q8IYB7 885 aaKnown RBP10.95□□□□□ -0.66
HERC3-204ENST00000422770 ATP6V0A1Q93050 837 aa10.95□□□□□ -0.66
HERC3-204ENST00000422770 GJA10Q969M2 543 aa10.95□□□□□ -0.66
HERC3-204ENST00000422770 RNPC3Q96LT9 517 aaKnown RBP10.95□□□□□ -0.66
HERC3-204ENST00000422770 LLPHQ9BRT6 129 aaKnown RBP10.95□□□□□ -0.66
HERC3-204ENST00000422770 SMARCAD1Q9H4L7 1026 aa10.95□□□□□ -0.66
HERC3-204ENST00000422770 ERAP1Q9NZ08 941 aa10.95□□□□□ -0.66
HERC3-204ENST00000422770 DDX25Q9UHL0 483 aaKnown RBP10.95□□□□□ -0.66
HERC3-204ENST00000422770 LOXHD1Q8IVV2 1947 aa10.95□□□□□ -0.66
HERC3-204ENST00000422770 GBF1Q92538 1859 aa10.94□□□□□ -0.66
HERC3-204ENST00000422770 FAM205CA6NFA0 338 aa10.94□□□□□ -0.66
HERC3-204ENST00000422770 HAS3O00219 553 aa10.94□□□□□ -0.66
HERC3-204ENST00000422770 GNAT1P11488 350 aa10.94□□□□□ -0.66
HERC3-204ENST00000422770 BMP8BP34820 402 aa10.94□□□□□ -0.66
HERC3-204ENST00000422770 PPFIA1Q13136 1202 aa10.94□□□□□ -0.66
HERC3-204ENST00000422770 SHHQ15465 462 aa10.94□□□□□ -0.66
HERC3-204ENST00000422770 NPY5RQ15761 445 aa10.94□□□□□ -0.66
HERC3-204ENST00000422770 C9orf50Q5SZB4 431 aa10.94□□□□□ -0.66
HERC3-204ENST00000422770 MIS18BP1Q6P0N0 1132 aa10.94□□□□□ -0.66
HERC3-204ENST00000422770 CRYGNQ8WXF5 182 aa10.94□□□□□ -0.66
HERC3-204ENST00000422770 TEKT3Q9BXF9 490 aa10.94□□□□□ -0.66
HERC3-204ENST00000422770 FTOQ9C0B1 505 aaKnown RBP eCLIP10.94□□□□□ -0.66
HERC3-204ENST00000422770 TBC1D22BQ9NU19 505 aa10.94□□□□□ -0.66
HERC3-204ENST00000422770 SETD4Q9NVD3 440 aa10.94□□□□□ -0.66
HERC3-204ENST00000422770 KIF3AQ9Y496 699 aa10.94□□□□□ -0.66
HERC3-204ENST00000422770 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.94□□□□□ -0.66
HERC3-204ENST00000422770 EVPLQ92817 2033 aa10.94□□□□□ -0.66
HERC3-204ENST00000422770 EMSYQ7Z589 1322 aa10.93□□□□□ -0.66
HERC3-204ENST00000422770 A0A1W2PPC1 479 aa10.93□□□□□ -0.66
HERC3-204ENST00000422770 ZBBXA8MT70 800 aa10.93□□□□□ -0.66
HERC3-204ENST00000422770 BTBD18B2RXH4 712 aa10.93□□□□□ -0.66
HERC3-204ENST00000422770 M0R2N6 131 aa10.93□□□□□ -0.66
HERC3-204ENST00000422770 MSH4O15457 936 aa10.93□□□□□ -0.66
HERC3-204ENST00000422770 CCNE2O96020 404 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms