RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 NFRKBQ6P4R8 1299 aa17.83■□□□□ 0.44
BRAT1-202ENST00000421712 ANKRD33Q7Z3H0 272 aa17.83■□□□□ 0.44
BRAT1-202ENST00000421712 C7orf31Q8N865 590 aa17.83■□□□□ 0.44
BRAT1-202ENST00000421712 KAT2BQ92831 832 aa17.83■□□□□ 0.44
BRAT1-202ENST00000421712 GJA10Q969M2 543 aa17.83■□□□□ 0.44
BRAT1-202ENST00000421712 LENG9Q96B70 501 aa17.83■□□□□ 0.44
BRAT1-202ENST00000421712 TOX2Q96NM4 488 aa17.83■□□□□ 0.44
BRAT1-202ENST00000421712 AZI2Q9H6S1 392 aa17.83■□□□□ 0.44
BRAT1-202ENST00000421712 TMEM39AQ9NV64 488 aa17.83■□□□□ 0.44
BRAT1-202ENST00000421712 ZNF215Q9UL58 517 aaPredicted RBP17.83■□□□□ 0.44
BRAT1-202ENST00000421712 SAMM50Q9Y512 469 aa17.83■□□□□ 0.44
BRAT1-202ENST00000421712 BACH1O14867 736 aa17.82■□□□□ 0.44
BRAT1-202ENST00000421712 DHX15O43143 795 aaKnown RBP17.82■□□□□ 0.44
BRAT1-202ENST00000421712 SLC37A4O43826 429 aa17.82■□□□□ 0.44
BRAT1-202ENST00000421712 BAG4O95429 457 aaKnown RBP17.82■□□□□ 0.44
BRAT1-202ENST00000421712 F2P00734 622 aa17.82■□□□□ 0.44
BRAT1-202ENST00000421712 TRIM50Q86XT4 487 aa17.82■□□□□ 0.44
BRAT1-202ENST00000421712 NOSTRINQ8IVI9 506 aa17.82■□□□□ 0.44
BRAT1-202ENST00000421712 SLC43A3Q8NBI5 491 aa17.82■□□□□ 0.44
BRAT1-202ENST00000421712 INTS4Q96HW7 963 aaKnown RBP17.82■□□□□ 0.44
BRAT1-202ENST00000421712 C16orf70Q9BSU1 422 aa17.82■□□□□ 0.44
BRAT1-202ENST00000421712 TEKT3Q9BXF9 490 aa17.82■□□□□ 0.44
BRAT1-202ENST00000421712 SMARCAD1Q9H4L7 1026 aa17.82■□□□□ 0.44
BRAT1-202ENST00000421712 NOL7Q9UMY1 257 aaKnown RBP17.82■□□□□ 0.44
BRAT1-202ENST00000421712 NOD1Q9Y239 953 aa17.82■□□□□ 0.44
BRAT1-202ENST00000421712 PDE4DIPQ5VU43 2346 aa17.82■□□□□ 0.44
BRAT1-202ENST00000421712 CHMP2AO43633 222 aa17.81■□□□□ 0.44
BRAT1-202ENST00000421712 PDCP20941 246 aa17.81■□□□□ 0.44
BRAT1-202ENST00000421712 MARK3P27448 753 aa17.81■□□□□ 0.44
BRAT1-202ENST00000421712 KRT76Q01546 638 aa17.81■□□□□ 0.44
BRAT1-202ENST00000421712 FAAP100Q0VG06 881 aa17.81■□□□□ 0.44
BRAT1-202ENST00000421712 MIS18BP1Q6P0N0 1132 aa17.81■□□□□ 0.44
BRAT1-202ENST00000421712 FAM126BQ8IXS8 530 aa17.81■□□□□ 0.44
BRAT1-202ENST00000421712 SLC5A5Q92911 643 aa17.81■□□□□ 0.44
BRAT1-202ENST00000421712 MBOAT7Q96N66 472 aa17.81■□□□□ 0.44
BRAT1-202ENST00000421712 RIT2Q99578 217 aa17.81■□□□□ 0.44
BRAT1-202ENST00000421712 TRPV6Q9H1D0 765 aa17.81■□□□□ 0.44
BRAT1-202ENST00000421712 HDAC6Q9UBN7 1215 aa17.81■□□□□ 0.44
BRAT1-202ENST00000421712 VPS37CA5D8V6 355 aaPredicted RBP17.8■□□□□ 0.44
BRAT1-202ENST00000421712 KIF28PB7ZC32 967 aa17.8■□□□□ 0.44
BRAT1-202ENST00000421712 HAS3O00219 553 aa17.8■□□□□ 0.44
BRAT1-202ENST00000421712 B4GALT4O60513 344 aa17.8■□□□□ 0.44
BRAT1-202ENST00000421712 CCNE2O96020 404 aa17.8■□□□□ 0.44
BRAT1-202ENST00000421712 SUPT20HL2P0C7V6 817 aa17.8■□□□□ 0.44
BRAT1-202ENST00000421712 MCM7P33993 719 aa17.8■□□□□ 0.44
BRAT1-202ENST00000421712 PTPN11Q06124 597 aaPredicted RBP17.8■□□□□ 0.44
BRAT1-202ENST00000421712 FAM160B1Q5W0V3 765 aa17.8■□□□□ 0.44
BRAT1-202ENST00000421712 ZNF746Q6NUN9 644 aaPredicted RBP17.8■□□□□ 0.44
BRAT1-202ENST00000421712 SH3RF1Q7Z6J0 888 aa17.8■□□□□ 0.44
BRAT1-202ENST00000421712 POTEDQ86YR6 584 aa17.8■□□□□ 0.44
BRAT1-202ENST00000421712 FAM20AQ96MK3 541 aa17.8■□□□□ 0.44
BRAT1-202ENST00000421712 LBHD1Q9BQE6 289 aaPredicted RBP17.8■□□□□ 0.44
BRAT1-202ENST00000421712 TRMT13Q9NUP7 481 aaKnown RBP17.8■□□□□ 0.44
BRAT1-202ENST00000421712 ERAP1Q9NZ08 941 aa17.8■□□□□ 0.44
BRAT1-202ENST00000421712 SCN10AQ9Y5Y9 1956 aa17.8■□□□□ 0.44
BRAT1-202ENST00000421712 TNRC18O15417 2968 aaPredicted RBP17.79■□□□□ 0.44
BRAT1-202ENST00000421712 NEMFO60524 1076 aa17.79■□□□□ 0.44
BRAT1-202ENST00000421712 PSAPP07602 524 aa17.79■□□□□ 0.44
BRAT1-202ENST00000421712 RAG1P15918 1043 aa17.79■□□□□ 0.44
BRAT1-202ENST00000421712 U2AF2P26368 475 aaKnown RBP eCLIP17.79■□□□□ 0.44
BRAT1-202ENST00000421712 STAT5BP51692 787 aa17.79■□□□□ 0.44
BRAT1-202ENST00000421712 ZNF174Q15697 407 aa17.79■□□□□ 0.44
BRAT1-202ENST00000421712 CALCRLQ16602 461 aa17.79■□□□□ 0.44
BRAT1-202ENST00000421712 SWSAP1Q6NVH7 229 aa17.79■□□□□ 0.44
BRAT1-202ENST00000421712 CKAP2LQ8IYA6 745 aa17.79■□□□□ 0.44
BRAT1-202ENST00000421712 SMAP1Q8IYB5 467 aaPredicted RBP17.79■□□□□ 0.44
BRAT1-202ENST00000421712 SPRYD3Q8NCJ5 442 aa17.79■□□□□ 0.44
BRAT1-202ENST00000421712 ETNPPLQ8TBG4 499 aa17.79■□□□□ 0.44
BRAT1-202ENST00000421712 PDLIM7Q9NR12 457 aa17.79■□□□□ 0.44
BRAT1-202ENST00000421712 PCDHA10Q9Y5I2 948 aa17.79■□□□□ 0.44
BRAT1-202ENST00000421712 WDR64B1ANS9 1081 aa17.78■□□□□ 0.44
BRAT1-202ENST00000421712 LGR5O75473 907 aa17.78■□□□□ 0.44
BRAT1-202ENST00000421712 PSMD10O75832 226 aa17.78■□□□□ 0.44
BRAT1-202ENST00000421712 ATG7O95352 703 aa17.78■□□□□ 0.44
BRAT1-202ENST00000421712 CD4P01730 458 aa17.78■□□□□ 0.44
BRAT1-202ENST00000421712 SMIM10L2AP0DMW4 78 aa17.78■□□□□ 0.44
BRAT1-202ENST00000421712 SMIM10L2BP0DMW5 78 aa17.78■□□□□ 0.44
BRAT1-202ENST00000421712 PTGISQ16647 500 aa17.78■□□□□ 0.44
BRAT1-202ENST00000421712 TTC38Q5R3I4 469 aa17.78■□□□□ 0.44
BRAT1-202ENST00000421712 GDF6Q6KF10 455 aaPredicted RBP17.78■□□□□ 0.44
BRAT1-202ENST00000421712 PDXDC2PQ6P474 469 aa17.78■□□□□ 0.44
BRAT1-202ENST00000421712 ABHD15Q6UXT9 468 aa17.78■□□□□ 0.44
BRAT1-202ENST00000421712 TRMT1LQ7Z2T5 733 aaKnown RBP17.78■□□□□ 0.44
BRAT1-202ENST00000421712 MIER3Q7Z3K6 550 aa17.78■□□□□ 0.44
BRAT1-202ENST00000421712 SLFN12Q8IYM2 578 aa17.78■□□□□ 0.44
BRAT1-202ENST00000421712 UNC45AQ9H3U1 944 aa17.78■□□□□ 0.44
BRAT1-202ENST00000421712 RNPEPQ9H4A4 650 aa17.78■□□□□ 0.44
BRAT1-202ENST00000421712 ZNF302Q9NR11 478 aa17.78■□□□□ 0.44
BRAT1-202ENST00000421712 DISC1Q9NRI5 854 aa17.78■□□□□ 0.44
BRAT1-202ENST00000421712 GTF2IRD1Q9UHL9 959 aa17.78■□□□□ 0.44
BRAT1-202ENST00000421712 EMSYQ7Z589 1322 aa17.77■□□□□ 0.44
BRAT1-202ENST00000421712 C17orf102A2RUQ5 167 aa17.77■□□□□ 0.44
BRAT1-202ENST00000421712 TRIM43BA6NCK2 446 aa17.77■□□□□ 0.44
BRAT1-202ENST00000421712 WNT7AO00755 349 aa17.77■□□□□ 0.44
BRAT1-202ENST00000421712 TBX3O15119 743 aa17.77■□□□□ 0.44
BRAT1-202ENST00000421712 GNAT1P11488 350 aa17.77■□□□□ 0.44
BRAT1-202ENST00000421712 CYP2C9P11712 490 aa17.77■□□□□ 0.44
BRAT1-202ENST00000421712 JAK3P52333 1124 aa17.77■□□□□ 0.44
BRAT1-202ENST00000421712 MDM2Q00987 491 aaPredicted RBP17.77■□□□□ 0.44
BRAT1-202ENST00000421712 PLPPR4Q7Z2D5 763 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms