RNA–Protein interactions for RNA: ENST00000420717.5

PTPN18-204, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-204ENST00000420717 CCNE2O96020 404 aa16.35■□□□□ 0.21
PTPN18-204ENST00000420717 CLTBP09497 229 aa16.35■□□□□ 0.21
PTPN18-204ENST00000420717 TCF7P36402 384 aaPredicted RBP16.35■□□□□ 0.21
PTPN18-204ENST00000420717 TRAPPC10P48553 1259 aa16.35■□□□□ 0.21
PTPN18-204ENST00000420717 PSEN2P49810 448 aa16.35■□□□□ 0.21
PTPN18-204ENST00000420717 ACTR2P61160 394 aa16.35■□□□□ 0.21
PTPN18-204ENST00000420717 MFSD10Q14728 455 aa16.35■□□□□ 0.21
PTPN18-204ENST00000420717 NOSTRINQ8IVI9 506 aa16.35■□□□□ 0.21
PTPN18-204ENST00000420717 DDX25Q9UHL0 483 aaKnown RBP16.35■□□□□ 0.21
PTPN18-204ENST00000420717 ZNF215Q9UL58 517 aaPredicted RBP16.35■□□□□ 0.21
PTPN18-204ENST00000420717 H0YGN5 161 aa16.34■□□□□ 0.21
PTPN18-204ENST00000420717 H3BRB1 525 aa16.34■□□□□ 0.21
PTPN18-204ENST00000420717 SLC37A4O43826 429 aa16.34■□□□□ 0.21
PTPN18-204ENST00000420717 PQBP1O60828 265 aaKnown RBP16.34■□□□□ 0.21
PTPN18-204ENST00000420717 KIAA0753Q2KHM9 967 aa16.34■□□□□ 0.21
PTPN18-204ENST00000420717 LETM2Q2VYF4 491 aa16.34■□□□□ 0.21
PTPN18-204ENST00000420717 ABHD15Q6UXT9 468 aa16.34■□□□□ 0.21
PTPN18-204ENST00000420717 RDM1Q8NG50 284 aa16.34■□□□□ 0.21
PTPN18-204ENST00000420717 AFAP1L1Q8TED9 768 aa16.34■□□□□ 0.21
PTPN18-204ENST00000420717 FAM20AQ96MK3 541 aa16.34■□□□□ 0.21
PTPN18-204ENST00000420717 CTAGE1Q96RT6 745 aa16.34■□□□□ 0.21
PTPN18-204ENST00000420717 PCYT2Q99447 389 aa16.34■□□□□ 0.21
PTPN18-204ENST00000420717 TUT1Q9H6E5 874 aaKnown RBP16.34■□□□□ 0.21
PTPN18-204ENST00000420717 PKD2L1Q9P0L9 805 aa16.34■□□□□ 0.21
PTPN18-204ENST00000420717 GTF2IRD1Q9UHL9 959 aa16.34■□□□□ 0.21
PTPN18-204ENST00000420717 KIF28PB7ZC32 967 aa16.33■□□□□ 0.2
PTPN18-204ENST00000420717 TLR3O15455 904 aaKnown RBP16.33■□□□□ 0.2
PTPN18-204ENST00000420717 SORBS3O60504 671 aa16.33■□□□□ 0.2
PTPN18-204ENST00000420717 B4GALT4O60513 344 aa16.33■□□□□ 0.2
PTPN18-204ENST00000420717 SLC26A2P50443 739 aa16.33■□□□□ 0.2
PTPN18-204ENST00000420717 GUCY1B3Q02153 619 aa16.33■□□□□ 0.2
PTPN18-204ENST00000420717 RBL2Q08999 1139 aa16.33■□□□□ 0.2
PTPN18-204ENST00000420717 PLPPR4Q7Z2D5 763 aa16.33■□□□□ 0.2
PTPN18-204ENST00000420717 VTI1AQ96AJ9 217 aa16.33■□□□□ 0.2
PTPN18-204ENST00000420717 PRO3102Q9H379 93 aa16.33■□□□□ 0.2
PTPN18-204ENST00000420717 ERAP1Q9NZ08 941 aa16.33■□□□□ 0.2
PTPN18-204ENST00000420717 CCNT1O60563 726 aaKnown RBP16.32■□□□□ 0.2
PTPN18-204ENST00000420717 GAS7O60861 476 aa16.32■□□□□ 0.2
PTPN18-204ENST00000420717 SUPT20HL2P0C7V6 817 aa16.32■□□□□ 0.2
PTPN18-204ENST00000420717 PDCP20941 246 aa16.32■□□□□ 0.2
PTPN18-204ENST00000420717 SFNP31947 248 aa16.32■□□□□ 0.2
PTPN18-204ENST00000420717 FOSBP53539 338 aa16.32■□□□□ 0.2
PTPN18-204ENST00000420717 LRCH2Q5VUJ6 765 aa16.32■□□□□ 0.2
PTPN18-204ENST00000420717 TRIM50Q86XT4 487 aa16.32■□□□□ 0.2
PTPN18-204ENST00000420717 HSCBQ8IWL3 235 aa16.32■□□□□ 0.2
PTPN18-204ENST00000420717 SMARCAD1Q9H4L7 1026 aa16.32■□□□□ 0.2
PTPN18-204ENST00000420717 VAV3Q9UKW4 847 aa16.32■□□□□ 0.2
PTPN18-204ENST00000420717 IGSF9BQ9UPX0 1349 aa16.32■□□□□ 0.2
PTPN18-204ENST00000420717 MYH9P35579 1960 aaKnown RBP16.31■□□□□ 0.2
PTPN18-204ENST00000420717 TRIM43BA6NCK2 446 aa16.31■□□□□ 0.2
PTPN18-204ENST00000420717 WDR64B1ANS9 1081 aa16.31■□□□□ 0.2
PTPN18-204ENST00000420717 WNT7AO00755 349 aa16.31■□□□□ 0.2
PTPN18-204ENST00000420717 JAK3P52333 1124 aa16.31■□□□□ 0.2
PTPN18-204ENST00000420717 ADAM17P78536 824 aa16.31■□□□□ 0.2
PTPN18-204ENST00000420717 PPP2R5CQ13362 524 aa16.31■□□□□ 0.2
PTPN18-204ENST00000420717 POTEDQ86YR6 584 aa16.31■□□□□ 0.2
PTPN18-204ENST00000420717 HAS1Q92839 578 aa16.31■□□□□ 0.2
PTPN18-204ENST00000420717 TRIM43Q96BQ3 446 aaPredicted RBP16.31■□□□□ 0.2
PTPN18-204ENST00000420717 GDF15Q99988 308 aa16.31■□□□□ 0.2
PTPN18-204ENST00000420717 TEKT3Q9BXF9 490 aa16.31■□□□□ 0.2
PTPN18-204ENST00000420717 HDAC6Q9UBN7 1215 aa16.31■□□□□ 0.2
PTPN18-204ENST00000420717 TCEAL9Q9UHQ7 104 aa16.31■□□□□ 0.2
PTPN18-204ENST00000420717 RANBP2P49792 3224 aaKnown RBP16.3■□□□□ 0.2
PTPN18-204ENST00000420717 PITPNM1O00562 1244 aa16.3■□□□□ 0.2
PTPN18-204ENST00000420717 NEMFO60524 1076 aa16.3■□□□□ 0.2
PTPN18-204ENST00000420717 SMIM10L2AP0DMW4 78 aa16.3■□□□□ 0.2
PTPN18-204ENST00000420717 SMIM10L2BP0DMW5 78 aa16.3■□□□□ 0.2
PTPN18-204ENST00000420717 SP4Q02446 784 aa16.3■□□□□ 0.2
PTPN18-204ENST00000420717 SPIRE1Q08AE8 756 aa16.3■□□□□ 0.2
PTPN18-204ENST00000420717 GDF6Q6KF10 455 aaPredicted RBP16.3■□□□□ 0.2
PTPN18-204ENST00000420717 MIS18BP1Q6P0N0 1132 aa16.3■□□□□ 0.2
PTPN18-204ENST00000420717 SH3RF1Q7Z6J0 888 aa16.3■□□□□ 0.2
PTPN18-204ENST00000420717 CCDC60Q8IWA6 550 aaPredicted RBP16.3■□□□□ 0.2
PTPN18-204ENST00000420717 SLFN12Q8IYM2 578 aa16.3■□□□□ 0.2
PTPN18-204ENST00000420717 C7orf31Q8N865 590 aa16.3■□□□□ 0.2
PTPN18-204ENST00000420717 MTMR9Q96QG7 549 aa16.3■□□□□ 0.2
PTPN18-204ENST00000420717 NOC4LQ9BVI4 516 aaKnown RBP16.3■□□□□ 0.2
PTPN18-204ENST00000420717 TRPV6Q9H1D0 765 aa16.3■□□□□ 0.2
PTPN18-204ENST00000420717 UNC45AQ9H3U1 944 aa16.3■□□□□ 0.2
PTPN18-204ENST00000420717 TRMT13Q9NUP7 481 aaKnown RBP16.3■□□□□ 0.2
PTPN18-204ENST00000420717 PRKAG2Q9UGJ0 569 aa16.3■□□□□ 0.2
PTPN18-204ENST00000420717 PCDHA10Q9Y5I2 948 aa16.3■□□□□ 0.2
PTPN18-204ENST00000420717 MAFBQ9Y5Q3 323 aaPredicted RBP16.3■□□□□ 0.2
PTPN18-204ENST00000420717 NRCAMQ92823 1304 aa16.29■□□□□ 0.2
PTPN18-204ENST00000420717 TIMP1P01033 207 aa16.29■□□□□ 0.2
PTPN18-204ENST00000420717 BMP8BP34820 402 aa16.29■□□□□ 0.2
PTPN18-204ENST00000420717 HIC1Q14526 733 aa16.29■□□□□ 0.2
PTPN18-204ENST00000420717 FAM160B1Q5W0V3 765 aa16.29■□□□□ 0.2
PTPN18-204ENST00000420717 LARP1BQ659C4 914 aaKnown RBP16.29■□□□□ 0.2
PTPN18-204ENST00000420717 SERINC5Q86VE9 423 aa16.29■□□□□ 0.2
PTPN18-204ENST00000420717 AZI2Q9H6S1 392 aa16.29■□□□□ 0.2
PTPN18-204ENST00000420717 TMEM39AQ9NV64 488 aa16.29■□□□□ 0.2
PTPN18-204ENST00000420717 ZMYND8Q9ULU4 1186 aaPredicted RBP16.29■□□□□ 0.2
PTPN18-204ENST00000420717 NOL7Q9UMY1 257 aaKnown RBP16.29■□□□□ 0.2
PTPN18-204ENST00000420717 TRIP12Q14669 1992 aaPredicted RBP16.29■□□□□ 0.2
PTPN18-204ENST00000420717 COL1A2P08123 1366 aa16.28■□□□□ 0.2
PTPN18-204ENST00000420717 KAT6AQ92794 2004 aa16.28■□□□□ 0.2
PTPN18-204ENST00000420717 MBLAC1A4D2B0 266 aaPredicted RBP16.28■□□□□ 0.2
PTPN18-204ENST00000420717 DDX39AO00148 427 aaKnown RBP16.28■□□□□ 0.2
PTPN18-204ENST00000420717 PSAPP07602 524 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms