RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 SREK1Q8WXA9 508 aaKnown RBP5.04□□□□□ -1.6
SDCBPP3-201ENST00000419629 EPB41L1Q9H4G0 881 aa5.04□□□□□ -1.6
SDCBPP3-201ENST00000419629 MAFKO60675 156 aa5.03□□□□□ -1.6
SDCBPP3-201ENST00000419629 KCNJ6P48051 423 aa5.03□□□□□ -1.6
SDCBPP3-201ENST00000419629 GFRA1P56159 465 aa5.03□□□□□ -1.6
SDCBPP3-201ENST00000419629 RAB33AQ14088 237 aa5.03□□□□□ -1.6
SDCBPP3-201ENST00000419629 DDR2Q16832 855 aa5.03□□□□□ -1.6
SDCBPP3-201ENST00000419629 SV2CQ496J9 727 aa5.03□□□□□ -1.6
SDCBPP3-201ENST00000419629 HS1BP3Q53T59 392 aa5.03□□□□□ -1.6
SDCBPP3-201ENST00000419629 PHF19Q5T6S3 580 aa5.03□□□□□ -1.6
SDCBPP3-201ENST00000419629 DTX3Q8N9I9 347 aa5.03□□□□□ -1.6
SDCBPP3-201ENST00000419629 C1orf159Q96HA4 380 aa5.03□□□□□ -1.6
SDCBPP3-201ENST00000419629 SEC61A2Q9H9S3 476 aa5.03□□□□□ -1.6
SDCBPP3-201ENST00000419629 ASH2LQ9UBL3 628 aa5.03□□□□□ -1.6
SDCBPP3-201ENST00000419629 NPFFR2Q9Y5X5 522 aa5.03□□□□□ -1.6
SDCBPP3-201ENST00000419629 IQCA1LA6NCM1 817 aa5.02□□□□□ -1.61
SDCBPP3-201ENST00000419629 KLF4O43474 513 aa5.02□□□□□ -1.61
SDCBPP3-201ENST00000419629 FOXS1O43638 330 aa5.02□□□□□ -1.61
SDCBPP3-201ENST00000419629 SUSD5O60279 629 aa5.02□□□□□ -1.61
SDCBPP3-201ENST00000419629 GJB6O95452 261 aa5.02□□□□□ -1.61
SDCBPP3-201ENST00000419629 KNG1P01042 644 aa5.02□□□□□ -1.61
SDCBPP3-201ENST00000419629 SLC35F1Q5T1Q4 408 aa5.02□□□□□ -1.61
SDCBPP3-201ENST00000419629 TCTN3Q6NUS6 607 aa5.02□□□□□ -1.61
SDCBPP3-201ENST00000419629 Q6ZUG5 572 aa5.02□□□□□ -1.61
SDCBPP3-201ENST00000419629 TMEM145Q8NBT3 493 aa5.02□□□□□ -1.61
SDCBPP3-201ENST00000419629 TTLL11Q8NHH1 800 aa5.02□□□□□ -1.61
SDCBPP3-201ENST00000419629 CLEC4DQ8WXI8 215 aa5.02□□□□□ -1.61
SDCBPP3-201ENST00000419629 GNRHR2Q96P88 292 aa5.02□□□□□ -1.61
SDCBPP3-201ENST00000419629 B2RBV5 119 aa5.01□□□□□ -1.61
SDCBPP3-201ENST00000419629 CHGBP05060 677 aa5.01□□□□□ -1.61
SDCBPP3-201ENST00000419629 FOXE3Q13461 319 aa5.01□□□□□ -1.61
SDCBPP3-201ENST00000419629 ZNF568Q3ZCX4 644 aa5.01□□□□□ -1.61
SDCBPP3-201ENST00000419629 CYP4F22Q6NT55 531 aa5.01□□□□□ -1.61
SDCBPP3-201ENST00000419629 TRIM48Q8IWZ4 208 aa5.01□□□□□ -1.61
SDCBPP3-201ENST00000419629 IFNL2Q8IZJ0 200 aa5.01□□□□□ -1.61
SDCBPP3-201ENST00000419629 AJUBAQ96IF1 538 aa5.01□□□□□ -1.61
SDCBPP3-201ENST00000419629 ZNF341Q9BYN7 854 aa5.01□□□□□ -1.61
SDCBPP3-201ENST00000419629 SLC6A20Q9NP91 592 aa5.01□□□□□ -1.61
SDCBPP3-201ENST00000419629 DLL4Q9NR61 685 aa5.01□□□□□ -1.61
SDCBPP3-201ENST00000419629 ST7Q9NRC1 585 aa5.01□□□□□ -1.61
SDCBPP3-201ENST00000419629 SIRPGQ9P1W8 387 aa5.01□□□□□ -1.61
SDCBPP3-201ENST00000419629 SLC4A7Q9Y6M7 1214 aa5.01□□□□□ -1.61
SDCBPP3-201ENST00000419629 NPIPB8E9PQR5 432 aa5□□□□□ -1.61
SDCBPP3-201ENST00000419629 KRIT1O00522 736 aa5□□□□□ -1.61
SDCBPP3-201ENST00000419629 CSF2RBP32927 897 aa5□□□□□ -1.61
SDCBPP3-201ENST00000419629 GRIN1Q05586 938 aa5□□□□□ -1.61
SDCBPP3-201ENST00000419629 SMAD2Q15796 467 aaKnown RBP5□□□□□ -1.61
SDCBPP3-201ENST00000419629 VASNQ6EMK4 673 aa5□□□□□ -1.61
SDCBPP3-201ENST00000419629 RALYLQ86SE5 291 aaKnown RBP5□□□□□ -1.61
SDCBPP3-201ENST00000419629 ST13P5Q8NFI4 369 aaPredicted RBP5□□□□□ -1.61
SDCBPP3-201ENST00000419629 PIP4K2CQ8TBX8 421 aa5□□□□□ -1.61
SDCBPP3-201ENST00000419629 LMF1Q96S06 567 aa5□□□□□ -1.61
SDCBPP3-201ENST00000419629 JAM3Q9BX67 310 aa5□□□□□ -1.61
SDCBPP3-201ENST00000419629 SLC27A2O14975 620 aa4.99□□□□□ -1.61
SDCBPP3-201ENST00000419629 FBXO21O94952 628 aa4.99□□□□□ -1.61
SDCBPP3-201ENST00000419629 CKMP06732 381 aa4.99□□□□□ -1.61
SDCBPP3-201ENST00000419629 PRKD1Q15139 912 aaPredicted RBP4.99□□□□□ -1.61
SDCBPP3-201ENST00000419629 MIIPQ5JXC2 388 aa4.99□□□□□ -1.61
SDCBPP3-201ENST00000419629 IGFL4Q6B9Z1 124 aa4.99□□□□□ -1.61
SDCBPP3-201ENST00000419629 RNF207Q6ZRF8 634 aa4.99□□□□□ -1.61
SDCBPP3-201ENST00000419629 RBM12BQ8IXT5 1001 aaKnown RBP4.99□□□□□ -1.61
SDCBPP3-201ENST00000419629 CELF2-AS1Q8N7Q2 184 aa4.99□□□□□ -1.61
SDCBPP3-201ENST00000419629 MICAL1Q8TDZ2 1067 aa4.99□□□□□ -1.61
SDCBPP3-201ENST00000419629 ZNF669Q96BR6 464 aaPredicted RBP4.99□□□□□ -1.61
SDCBPP3-201ENST00000419629 ZNF503Q96F45 646 aa4.99□□□□□ -1.61
SDCBPP3-201ENST00000419629 SGSM3Q96HU1 749 aa4.99□□□□□ -1.61
SDCBPP3-201ENST00000419629 DRC1Q96MC2 740 aa4.99□□□□□ -1.61
SDCBPP3-201ENST00000419629 PDGFDQ9GZP0 370 aaPredicted RBP4.99□□□□□ -1.61
SDCBPP3-201ENST00000419629 KATNBL1Q9H079 304 aa4.99□□□□□ -1.61
SDCBPP3-201ENST00000419629 PLSCR1O15162 318 aa4.98□□□□□ -1.61
SDCBPP3-201ENST00000419629 MSCO60682 206 aa4.98□□□□□ -1.61
SDCBPP3-201ENST00000419629 GRIA2P42262 883 aa4.98□□□□□ -1.61
SDCBPP3-201ENST00000419629 RANGAP1P46060 587 aaPredicted RBP4.98□□□□□ -1.61
SDCBPP3-201ENST00000419629 TGFB2P61812 414 aa4.98□□□□□ -1.61
SDCBPP3-201ENST00000419629 RBL2Q08999 1139 aa4.98□□□□□ -1.61
SDCBPP3-201ENST00000419629 FHL2Q14192 279 aa4.98□□□□□ -1.61
SDCBPP3-201ENST00000419629 HSP90AA2PQ14568 343 aaPredicted RBP4.98□□□□□ -1.61
SDCBPP3-201ENST00000419629 SKIDA1Q1XH10 827 aa4.98□□□□□ -1.61
SDCBPP3-201ENST00000419629 SLC10A6Q3KNW5 377 aa4.98□□□□□ -1.61
SDCBPP3-201ENST00000419629 MRM1Q6IN84 353 aaKnown RBP4.98□□□□□ -1.61
SDCBPP3-201ENST00000419629 GPR155Q7Z3F1 870 aa4.98□□□□□ -1.61
SDCBPP3-201ENST00000419629 LRP10Q7Z4F1 713 aa4.98□□□□□ -1.61
SDCBPP3-201ENST00000419629 LRRC47Q8N1G4 583 aaKnown RBP4.98□□□□□ -1.61
SDCBPP3-201ENST00000419629 GIMAP8Q8ND71 665 aaPredicted RBP4.98□□□□□ -1.61
SDCBPP3-201ENST00000419629 LRRC37BQ96QE4 947 aa4.98□□□□□ -1.61
SDCBPP3-201ENST00000419629 CCDC113Q9H0I3 377 aa4.98□□□□□ -1.61
SDCBPP3-201ENST00000419629 KCND1Q9NSA2 647 aa4.98□□□□□ -1.61
SDCBPP3-201ENST00000419629 ZFP69BQ9UJL9 534 aa4.98□□□□□ -1.61
SDCBPP3-201ENST00000419629 ZFR2Q9UPR6 939 aaKnown RBP4.98□□□□□ -1.61
SDCBPP3-201ENST00000419629 FAHP16930 419 aa4.97□□□□□ -1.61
SDCBPP3-201ENST00000419629 GLRBP48167 497 aa4.97□□□□□ -1.61
SDCBPP3-201ENST00000419629 IFRD2Q12894 506 aaPredicted RBP4.97□□□□□ -1.61
SDCBPP3-201ENST00000419629 TUSC3Q13454 348 aa4.97□□□□□ -1.61
SDCBPP3-201ENST00000419629 AGBL4Q5VU57 503 aa4.97□□□□□ -1.61
SDCBPP3-201ENST00000419629 TAX1BP1Q86VP1 789 aa4.97□□□□□ -1.61
SDCBPP3-201ENST00000419629 STPG3Q8N7X2 389 aa4.97□□□□□ -1.61
SDCBPP3-201ENST00000419629 UBXN4Q92575 508 aa4.97□□□□□ -1.61
SDCBPP3-201ENST00000419629 EDAQ92838 391 aa4.97□□□□□ -1.61
SDCBPP3-201ENST00000419629 NEIL1Q96FI4 390 aaPredicted RBP4.97□□□□□ -1.61
SDCBPP3-201ENST00000419629 ADOQ96SZ5 270 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms