RNA–Protein interactions for RNA: ENST00000419442.1

RAPGEF1-205, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-205ENST00000419442 CHRNA1P02708 482 aa12.29□□□□□ -0.44
RAPGEF1-205ENST00000419442 EIF2AK2P19525 551 aaKnown RBP12.29□□□□□ -0.44
RAPGEF1-205ENST00000419442 GHRHRQ02643 423 aa12.29□□□□□ -0.44
RAPGEF1-205ENST00000419442 KCNC3Q14003 757 aa12.29□□□□□ -0.44
RAPGEF1-205ENST00000419442 DUSP6Q16828 381 aa12.29□□□□□ -0.44
RAPGEF1-205ENST00000419442 USH1GQ495M9 461 aa12.29□□□□□ -0.44
RAPGEF1-205ENST00000419442 ASTLQ6HA08 431 aaPredicted RBP12.29□□□□□ -0.44
RAPGEF1-205ENST00000419442 KLHL23Q8NBE8 558 aa12.29□□□□□ -0.44
RAPGEF1-205ENST00000419442 KREMEN2Q8NCW0 462 aa12.29□□□□□ -0.44
RAPGEF1-205ENST00000419442 SEC62Q99442 399 aaKnown RBP12.29□□□□□ -0.44
RAPGEF1-205ENST00000419442 CDCA3Q99618 268 aaPredicted RBP12.29□□□□□ -0.44
RAPGEF1-205ENST00000419442 PXMP2Q9NR77 195 aa12.29□□□□□ -0.44
RAPGEF1-205ENST00000419442 SORCS3Q9UPU3 1222 aa12.29□□□□□ -0.44
RAPGEF1-205ENST00000419442 FNDC1Q4ZHG4 1894 aaPredicted RBP12.29□□□□□ -0.44
RAPGEF1-205ENST00000419442 EP300Q09472 2414 aaPredicted RBP12.28□□□□□ -0.44
RAPGEF1-205ENST00000419442 DMDP11532 3685 aa12.28□□□□□ -0.44
RAPGEF1-205ENST00000419442 BRD1O95696 1058 aa12.28□□□□□ -0.44
RAPGEF1-205ENST00000419442 LGALS2P05162 132 aa12.28□□□□□ -0.44
RAPGEF1-205ENST00000419442 GNAT1P11488 350 aa12.28□□□□□ -0.44
RAPGEF1-205ENST00000419442 UBA1P22314 1058 aaKnown RBP12.28□□□□□ -0.44
RAPGEF1-205ENST00000419442 CLCN5P51795 746 aa12.28□□□□□ -0.44
RAPGEF1-205ENST00000419442 SP2Q02086 613 aa12.28□□□□□ -0.44
RAPGEF1-205ENST00000419442 MGAT3Q09327 533 aa12.28□□□□□ -0.44
RAPGEF1-205ENST00000419442 MTMR3Q13615 1198 aa12.28□□□□□ -0.44
RAPGEF1-205ENST00000419442 ARHGEF16Q5VV41 709 aa12.28□□□□□ -0.44
RAPGEF1-205ENST00000419442 DGLUCYQ7Z3D6 616 aa12.28□□□□□ -0.44
RAPGEF1-205ENST00000419442 RBM23Q86U06 439 aaKnown RBP12.28□□□□□ -0.44
RAPGEF1-205ENST00000419442 MCF2L2Q86YR7 1114 aa12.28□□□□□ -0.44
RAPGEF1-205ENST00000419442 PANK1Q8TE04 598 aa12.28□□□□□ -0.44
RAPGEF1-205ENST00000419442 NEK1Q96PY6 1258 aa12.28□□□□□ -0.44
RAPGEF1-205ENST00000419442 LRRCC1Q9C099 1032 aa12.28□□□□□ -0.44
RAPGEF1-205ENST00000419442 TLE6Q9H808 572 aa12.28□□□□□ -0.44
RAPGEF1-205ENST00000419442 PCDHGC5Q9Y5F6 944 aa12.28□□□□□ -0.44
RAPGEF1-205ENST00000419442 TPRP12270 2363 aaKnown RBP12.28□□□□□ -0.44
RAPGEF1-205ENST00000419442 LOXHD1Q8IVV2 1947 aa12.27□□□□□ -0.44
RAPGEF1-205ENST00000419442 FANCMQ8IYD8 2048 aa12.27□□□□□ -0.44
RAPGEF1-205ENST00000419442 TGFB3P10600 412 aa12.27□□□□□ -0.45
RAPGEF1-205ENST00000419442 GHRP10912 638 aa12.27□□□□□ -0.45
RAPGEF1-205ENST00000419442 RBM10P98175 930 aaKnown RBP12.27□□□□□ -0.45
RAPGEF1-205ENST00000419442 UBE3AQ05086 875 aa12.27□□□□□ -0.45
RAPGEF1-205ENST00000419442 LPIN1Q14693 890 aa12.27□□□□□ -0.45
RAPGEF1-205ENST00000419442 ZMYM1Q5SVZ6 1142 aa12.27□□□□□ -0.45
RAPGEF1-205ENST00000419442 GPATCH4Q5T3I0 446 aaKnown RBP12.27□□□□□ -0.45
RAPGEF1-205ENST00000419442 SYCE2Q6PIF2 218 aa12.27□□□□□ -0.45
RAPGEF1-205ENST00000419442 ZBTB33Q86T24 672 aa12.27□□□□□ -0.45
RAPGEF1-205ENST00000419442 LINC01599Q8WXQ3 324 aa12.27□□□□□ -0.45
RAPGEF1-205ENST00000419442 PDCD2LQ9BRP1 358 aa12.27□□□□□ -0.45
RAPGEF1-205ENST00000419442 ZBTB40Q9NUA8 1239 aa12.27□□□□□ -0.45
RAPGEF1-205ENST00000419442 SETD4Q9NVD3 440 aa12.27□□□□□ -0.45
RAPGEF1-205ENST00000419442 CCDC171Q6TFL3 1326 aa12.27□□□□□ -0.45
RAPGEF1-205ENST00000419442 VPS13AQ96RL7 3174 aa12.26□□□□□ -0.45
RAPGEF1-205ENST00000419442 HSPD1P10809 573 aaKnown RBP12.26□□□□□ -0.45
RAPGEF1-205ENST00000419442 HSD17B4P51659 736 aa12.26□□□□□ -0.45
RAPGEF1-205ENST00000419442 PUM1Q14671 1186 aaKnown RBP eCLIP12.26□□□□□ -0.45
RAPGEF1-205ENST00000419442 CDC37Q16543 378 aaPredicted RBP12.26□□□□□ -0.45
RAPGEF1-205ENST00000419442 ANKRD54Q6NXT1 300 aa12.26□□□□□ -0.45
RAPGEF1-205ENST00000419442 VSIG10LQ86VR7 867 aa12.26□□□□□ -0.45
RAPGEF1-205ENST00000419442 NPAS4Q8IUM7 802 aa12.26□□□□□ -0.45
RAPGEF1-205ENST00000419442 RASGRP4Q8TDF6 673 aa12.26□□□□□ -0.45
RAPGEF1-205ENST00000419442 LMBR1Q8WVP7 490 aa12.26□□□□□ -0.45
RAPGEF1-205ENST00000419442 TTC14Q96N46 770 aa12.26□□□□□ -0.45
RAPGEF1-205ENST00000419442 CEP250Q9BV73 2442 aa12.26□□□□□ -0.45
RAPGEF1-205ENST00000419442 OPLAHO14841 1288 aa12.25□□□□□ -0.45
RAPGEF1-205ENST00000419442 FSCN2O14926 492 aa12.25□□□□□ -0.45
RAPGEF1-205ENST00000419442 PER2O15055 1255 aa12.25□□□□□ -0.45
RAPGEF1-205ENST00000419442 SMARCA5O60264 1052 aaPredicted RBP12.25□□□□□ -0.45
RAPGEF1-205ENST00000419442 FBXO47Q5MNV8 452 aa12.25□□□□□ -0.45
RAPGEF1-205ENST00000419442 CWF19L1Q69YN2 538 aaKnown RBP12.25□□□□□ -0.45
RAPGEF1-205ENST00000419442 PDE12Q6L8Q7 609 aaKnown RBP12.25□□□□□ -0.45
RAPGEF1-205ENST00000419442 RTN4RL1Q86UN2 441 aaPredicted RBP12.25□□□□□ -0.45
RAPGEF1-205ENST00000419442 CNTNAP3BQ96NU0 1288 aa12.25□□□□□ -0.45
RAPGEF1-205ENST00000419442 USP26Q9BXU7 913 aa12.25□□□□□ -0.45
RAPGEF1-205ENST00000419442 CNTNAP3Q9BZ76 1288 aa12.25□□□□□ -0.45
RAPGEF1-205ENST00000419442 UBA5Q9GZZ9 404 aa12.25□□□□□ -0.45
RAPGEF1-205ENST00000419442 CPVLQ9H3G5 476 aa12.25□□□□□ -0.45
RAPGEF1-205ENST00000419442 SEMA4AQ9H3S1 761 aa12.25□□□□□ -0.45
RAPGEF1-205ENST00000419442 DLL3Q9NYJ7 618 aa12.25□□□□□ -0.45
RAPGEF1-205ENST00000419442 MRPL11Q9Y3B7 192 aaKnown RBP12.25□□□□□ -0.45
RAPGEF1-205ENST00000419442 NR2E1Q9Y466 385 aa12.25□□□□□ -0.45
RAPGEF1-205ENST00000419442 DENND4AQ7Z401 1863 aa12.25□□□□□ -0.45
RAPGEF1-205ENST00000419442 OTOGLQ3ZCN5 2332 aa12.25□□□□□ -0.45
RAPGEF1-205ENST00000419442 SORBS3O60504 671 aa12.24□□□□□ -0.45
RAPGEF1-205ENST00000419442 SRGAP2BP0DMP2 458 aa12.24□□□□□ -0.45
RAPGEF1-205ENST00000419442 HOXB8P17481 243 aaPredicted RBP12.24□□□□□ -0.45
RAPGEF1-205ENST00000419442 ALX1Q15699 326 aa12.24□□□□□ -0.45
RAPGEF1-205ENST00000419442 TAF2Q6P1X5 1199 aa12.24□□□□□ -0.45
RAPGEF1-205ENST00000419442 TSHZ1Q6ZSZ6 1077 aa12.24□□□□□ -0.45
RAPGEF1-205ENST00000419442 STOX1Q6ZVD7 989 aa12.24□□□□□ -0.45
RAPGEF1-205ENST00000419442 CCDC105Q8IYK2 499 aa12.24□□□□□ -0.45
RAPGEF1-205ENST00000419442 GPKOWQ92917 476 aaPredicted RBP eCLIP12.24□□□□□ -0.45
RAPGEF1-205ENST00000419442 SMOC2Q9H3U7 446 aa12.24□□□□□ -0.45
RAPGEF1-205ENST00000419442 BCAS3Q9H6U6 928 aa12.24□□□□□ -0.45
RAPGEF1-205ENST00000419442 MLXIPQ9HAP2 919 aa12.24□□□□□ -0.45
RAPGEF1-205ENST00000419442 MAP3K20Q9NYL2 800 aaKnown RBP12.24□□□□□ -0.45
RAPGEF1-205ENST00000419442 DMXL1Q9Y485 3027 aa12.24□□□□□ -0.45
RAPGEF1-205ENST00000419442 NRCAMQ92823 1304 aa12.23□□□□□ -0.45
RAPGEF1-205ENST00000419442 C2CD4DB7Z1M9 353 aa12.23□□□□□ -0.45
RAPGEF1-205ENST00000419442 GOLGA8HP0CJ92 632 aa12.23□□□□□ -0.45
RAPGEF1-205ENST00000419442 AOC1P19801 751 aa12.23□□□□□ -0.45
RAPGEF1-205ENST00000419442 ERVFC1P60507 584 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms