RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 SLC9A2Q9UBY0 812 aa23.14■■□□□ 1.29
GTF3A-202ENST00000419181 LARGE1O95461 756 aa23.13■■□□□ 1.29
GTF3A-202ENST00000419181 CTDNEP1O95476 244 aa23.13■■□□□ 1.29
GTF3A-202ENST00000419181 RFC2P35250 354 aa23.13■■□□□ 1.29
GTF3A-202ENST00000419181 NPY5RQ15761 445 aa23.13■■□□□ 1.29
GTF3A-202ENST00000419181 PLA2G4DQ86XP0 818 aa23.13■■□□□ 1.29
GTF3A-202ENST00000419181 RPUSD2Q8IZ73 545 aaKnown RBP23.13■■□□□ 1.29
GTF3A-202ENST00000419181 DAGLBQ8NCG7 672 aa23.13■■□□□ 1.29
GTF3A-202ENST00000419181 AFAP1L1Q8TED9 768 aa23.13■■□□□ 1.29
GTF3A-202ENST00000419181 HERVK_113Q902F9 699 aa23.13■■□□□ 1.29
GTF3A-202ENST00000419181 SDF4Q9BRK5 362 aa23.13■■□□□ 1.29
GTF3A-202ENST00000419181 PCDHA4Q9UN74 947 aa23.13■■□□□ 1.29
GTF3A-202ENST00000419181 C17orf102A2RUQ5 167 aa23.12■■□□□ 1.29
GTF3A-202ENST00000419181 FGBP02675 491 aa23.12■■□□□ 1.29
GTF3A-202ENST00000419181 PFKMP08237 780 aa23.12■■□□□ 1.29
GTF3A-202ENST00000419181 CIITAP33076 1130 aa23.12■■□□□ 1.29
GTF3A-202ENST00000419181 TRIM71Q2Q1W2 868 aaKnown RBP23.12■■□□□ 1.29
GTF3A-202ENST00000419181 SERINC5Q86VE9 423 aa23.12■■□□□ 1.29
GTF3A-202ENST00000419181 WNT8BQ93098 351 aa23.12■■□□□ 1.29
GTF3A-202ENST00000419181 GTF3C6Q969F1 213 aa23.12■■□□□ 1.29
GTF3A-202ENST00000419181 RNPEPQ9H4A4 650 aa23.12■■□□□ 1.29
GTF3A-202ENST00000419181 EMSYQ7Z589 1322 aa23.11■■□□□ 1.29
GTF3A-202ENST00000419181 TET1Q8NFU7 2136 aa23.11■■□□□ 1.29
GTF3A-202ENST00000419181 M0R2N6 131 aa23.11■■□□□ 1.29
GTF3A-202ENST00000419181 SELPP16109 830 aa23.11■■□□□ 1.29
GTF3A-202ENST00000419181 SETQ01105 290 aaPredicted RBP23.11■■□□□ 1.29
GTF3A-202ENST00000419181 GALNT17Q6IS24 598 aa23.11■■□□□ 1.29
GTF3A-202ENST00000419181 BLIDQ8IZY5 108 aa23.11■■□□□ 1.29
GTF3A-202ENST00000419181 NECAB1Q8N987 351 aa23.11■■□□□ 1.29
GTF3A-202ENST00000419181 CXXC1Q9P0U4 656 aaPredicted RBP23.11■■□□□ 1.29
GTF3A-202ENST00000419181 KAT6AQ92794 2004 aa23.11■■□□□ 1.29
GTF3A-202ENST00000419181 EDIL3O43854 480 aa23.1■■□□□ 1.29
GTF3A-202ENST00000419181 LGR5O75473 907 aa23.1■■□□□ 1.29
GTF3A-202ENST00000419181 CKBP12277 381 aa23.1■■□□□ 1.29
GTF3A-202ENST00000419181 ACTR2P61160 394 aa23.1■■□□□ 1.29
GTF3A-202ENST00000419181 FAM109BQ6ICB4 259 aaPredicted RBP23.1■■□□□ 1.29
GTF3A-202ENST00000419181 LRRC8DQ7L1W4 858 aa23.1■■□□□ 1.29
GTF3A-202ENST00000419181 OTOP2Q7RTS6 562 aa23.1■■□□□ 1.29
GTF3A-202ENST00000419181 DEFB128Q7Z7B8 93 aa23.1■■□□□ 1.29
GTF3A-202ENST00000419181 ATP6V0A1Q93050 837 aa23.1■■□□□ 1.29
GTF3A-202ENST00000419181 PCYT2Q99447 389 aa23.1■■□□□ 1.29
GTF3A-202ENST00000419181 KIF2CQ99661 725 aa23.1■■□□□ 1.29
GTF3A-202ENST00000419181 SETD4Q9NVD3 440 aa23.1■■□□□ 1.29
GTF3A-202ENST00000419181 ERAP1Q9NZ08 941 aa23.1■■□□□ 1.29
GTF3A-202ENST00000419181 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.09■■□□□ 1.29
GTF3A-202ENST00000419181 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.09■■□□□ 1.29
GTF3A-202ENST00000419181 IPO5O00410 1097 aaKnown RBP23.09■■□□□ 1.29
GTF3A-202ENST00000419181 DHX15O43143 795 aaKnown RBP23.09■■□□□ 1.29
GTF3A-202ENST00000419181 DTNBO60941 627 aa23.09■■□□□ 1.29
GTF3A-202ENST00000419181 ADAM17P78536 824 aa23.09■■□□□ 1.29
GTF3A-202ENST00000419181 TRAF7Q6Q0C0 670 aa23.09■■□□□ 1.29
GTF3A-202ENST00000419181 GLG1Q92896 1179 aa23.09■■□□□ 1.29
GTF3A-202ENST00000419181 LENG9Q96B70 501 aa23.09■■□□□ 1.29
GTF3A-202ENST00000419181 PHF20Q9BVI0 1012 aa23.09■■□□□ 1.29
GTF3A-202ENST00000419181 C22orf23Q9BZE7 217 aa23.09■■□□□ 1.29
GTF3A-202ENST00000419181 MTIF3Q9H2K0 278 aaKnown RBP23.09■■□□□ 1.29
GTF3A-202ENST00000419181 SMARCAD1Q9H4L7 1026 aa23.09■■□□□ 1.29
GTF3A-202ENST00000419181 MTMR10Q9NXD2 777 aa23.09■■□□□ 1.29
GTF3A-202ENST00000419181 NRCAMQ92823 1304 aa23.08■■□□□ 1.29
GTF3A-202ENST00000419181 TREHO43280 583 aa23.08■■□□□ 1.29
GTF3A-202ENST00000419181 ATG7O95352 703 aa23.08■■□□□ 1.29
GTF3A-202ENST00000419181 CCNE2O96020 404 aa23.08■■□□□ 1.29
GTF3A-202ENST00000419181 GNAT1P11488 350 aa23.08■■□□□ 1.29
GTF3A-202ENST00000419181 USP11P51784 963 aa23.08■■□□□ 1.29
GTF3A-202ENST00000419181 GPNMBQ14956 572 aa23.08■■□□□ 1.29
GTF3A-202ENST00000419181 PRR16Q569H4 304 aa23.08■■□□□ 1.29
GTF3A-202ENST00000419181 ZNF697Q5TEC3 545 aa23.08■■□□□ 1.29
GTF3A-202ENST00000419181 TBCKQ8TEA7 893 aa23.08■■□□□ 1.29
GTF3A-202ENST00000419181 LMBR1Q8WVP7 490 aa23.08■■□□□ 1.29
GTF3A-202ENST00000419181 ZNF577Q9BSK1 485 aa23.08■■□□□ 1.29
GTF3A-202ENST00000419181 ORC3Q9UBD5 711 aaPredicted RBP23.08■■□□□ 1.29
GTF3A-202ENST00000419181 KCNJ14Q9UNX9 436 aa23.08■■□□□ 1.29
GTF3A-202ENST00000419181 PARNO95453 639 aaKnown RBP23.07■■□□□ 1.28
GTF3A-202ENST00000419181 FDPSP14324 419 aaKnown RBP23.07■■□□□ 1.28
GTF3A-202ENST00000419181 XBP1P17861 261 aa23.07■■□□□ 1.28
GTF3A-202ENST00000419181 MARK3P27448 753 aa23.07■■□□□ 1.28
GTF3A-202ENST00000419181 RBM25P49756 843 aaKnown RBP23.07■■□□□ 1.28
GTF3A-202ENST00000419181 ZNF618Q5T7W0 954 aa23.07■■□□□ 1.28
GTF3A-202ENST00000419181 NSUN7Q8NE18 718 aaKnown RBP23.07■■□□□ 1.28
GTF3A-202ENST00000419181 FAM161BQ96MY7 647 aa23.07■■□□□ 1.28
GTF3A-202ENST00000419181 AZI2Q9H6S1 392 aa23.07■■□□□ 1.28
GTF3A-202ENST00000419181 TBC1D22BQ9NU19 505 aa23.07■■□□□ 1.28
GTF3A-202ENST00000419181 DDX39AO00148 427 aaKnown RBP23.06■■□□□ 1.28
GTF3A-202ENST00000419181 ST3GAL1Q11201 340 aa23.06■■□□□ 1.28
GTF3A-202ENST00000419181 WASF1Q92558 559 aa23.06■■□□□ 1.28
GTF3A-202ENST00000419181 GJB4Q9NTQ9 266 aa23.06■■□□□ 1.28
GTF3A-202ENST00000419181 IGKV6D-21A0A0A0MT36 114 aa23.05■■□□□ 1.28
GTF3A-202ENST00000419181 NBNO60934 754 aa23.05■■□□□ 1.28
GTF3A-202ENST00000419181 CXCL10P02778 98 aa23.05■■□□□ 1.28
GTF3A-202ENST00000419181 THPOP40225 353 aa23.05■■□□□ 1.28
GTF3A-202ENST00000419181 PPFIA1Q13136 1202 aa23.05■■□□□ 1.28
GTF3A-202ENST00000419181 ABHD15Q6UXT9 468 aa23.05■■□□□ 1.28
GTF3A-202ENST00000419181 PLPPR4Q7Z2D5 763 aa23.05■■□□□ 1.28
GTF3A-202ENST00000419181 UIMC1Q96RL1 719 aa23.05■■□□□ 1.28
GTF3A-202ENST00000419181 FTOQ9C0B1 505 aaKnown RBP eCLIP23.05■■□□□ 1.28
GTF3A-202ENST00000419181 LIMCH1Q9UPQ0 1083 aa23.05■■□□□ 1.28
GTF3A-202ENST00000419181 GBF1Q92538 1859 aa23.05■■□□□ 1.28
GTF3A-202ENST00000419181 GRXCR1A8MXD5 290 aa23.04■■□□□ 1.28
GTF3A-202ENST00000419181 CAND2O75155 1236 aa23.04■■□□□ 1.28
GTF3A-202ENST00000419181 ACTN1P12814 892 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms