RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 DHX15O43143 795 aaKnown RBP10.05□□□□□ -0.8
LINCMD1-201ENST00000418518 GAS7O60861 476 aa10.05□□□□□ -0.8
LINCMD1-201ENST00000418518 SLITRK3O94933 977 aa10.05□□□□□ -0.8
LINCMD1-201ENST00000418518 ARP10275 920 aa10.05□□□□□ -0.8
LINCMD1-201ENST00000418518 ALAS1P13196 640 aa10.05□□□□□ -0.8
LINCMD1-201ENST00000418518 GAP43P17677 238 aa10.05□□□□□ -0.8
LINCMD1-201ENST00000418518 CASP14P31944 242 aa10.05□□□□□ -0.8
LINCMD1-201ENST00000418518 DSG3P32926 999 aa10.05□□□□□ -0.8
LINCMD1-201ENST00000418518 EPS15P42566 896 aa10.05□□□□□ -0.8
LINCMD1-201ENST00000418518 PSMC6P62333 389 aa10.05□□□□□ -0.8
LINCMD1-201ENST00000418518 MAN2A1Q16706 1144 aa10.05□□□□□ -0.8
LINCMD1-201ENST00000418518 EDRF1Q3B7T1 1238 aa10.05□□□□□ -0.8
LINCMD1-201ENST00000418518 MUM1L1Q5H9M0 696 aa10.05□□□□□ -0.8
LINCMD1-201ENST00000418518 GLIS3Q8NEA6 775 aa10.05□□□□□ -0.8
LINCMD1-201ENST00000418518 IL31RAQ8NI17 732 aa10.05□□□□□ -0.8
LINCMD1-201ENST00000418518 SCFD1Q8WVM8 642 aa10.05□□□□□ -0.8
LINCMD1-201ENST00000418518 ATG4CQ96DT6 458 aa10.05□□□□□ -0.8
LINCMD1-201ENST00000418518 REEP2Q9BRK0 252 aa10.05□□□□□ -0.8
LINCMD1-201ENST00000418518 NUP58Q9BVL2 599 aa10.05□□□□□ -0.8
LINCMD1-201ENST00000418518 TEKT3Q9BXF9 490 aa10.05□□□□□ -0.8
LINCMD1-201ENST00000418518 UNC45AQ9H3U1 944 aa10.05□□□□□ -0.8
LINCMD1-201ENST00000418518 RAVER2Q9HCJ3 691 aaKnown RBP10.05□□□□□ -0.8
LINCMD1-201ENST00000418518 OLFML3Q9NRN5 406 aa10.05□□□□□ -0.8
LINCMD1-201ENST00000418518 ADARB2Q9NS39 739 aaKnown RBP10.05□□□□□ -0.8
LINCMD1-201ENST00000418518 ABHD10Q9NUJ1 306 aa10.05□□□□□ -0.8
LINCMD1-201ENST00000418518 TRMT1Q9NXH9 659 aaKnown RBP10.05□□□□□ -0.8
LINCMD1-201ENST00000418518 CAPN11Q9UMQ6 739 aa10.05□□□□□ -0.8
LINCMD1-201ENST00000418518 PPP2R2CQ9Y2T4 447 aa10.05□□□□□ -0.8
LINCMD1-201ENST00000418518 AFG3L2Q9Y4W6 797 aa10.05□□□□□ -0.8
LINCMD1-201ENST00000418518 UBE4BO95155 1302 aa10.05□□□□□ -0.8
LINCMD1-201ENST00000418518 PHLPP2Q6ZVD8 1323 aa10.05□□□□□ -0.8
LINCMD1-201ENST00000418518 GOLGB1Q14789 3259 aaKnown RBP10.04□□□□□ -0.8
LINCMD1-201ENST00000418518 RIOK3O14730 519 aaKnown RBP10.04□□□□□ -0.8
LINCMD1-201ENST00000418518 EIF3DO15371 548 aaKnown RBP eCLIP10.04□□□□□ -0.8
LINCMD1-201ENST00000418518 CTIFO43310 598 aaKnown RBP10.04□□□□□ -0.8
LINCMD1-201ENST00000418518 LYPLA2O95372 231 aa10.04□□□□□ -0.8
LINCMD1-201ENST00000418518 GNA14O95837 355 aa10.04□□□□□ -0.8
LINCMD1-201ENST00000418518 SSBP05455 408 aaKnown RBP eCLIP10.04□□□□□ -0.8
LINCMD1-201ENST00000418518 ITGB5P18084 799 aa10.04□□□□□ -0.8
LINCMD1-201ENST00000418518 MTIF2P46199 727 aaKnown RBP10.04□□□□□ -0.8
LINCMD1-201ENST00000418518 ZNF131P52739 623 aa10.04□□□□□ -0.8
LINCMD1-201ENST00000418518 ETF1P62495 437 aaKnown RBP10.04□□□□□ -0.8
LINCMD1-201ENST00000418518 RPS6P62753 249 aaKnown RBP10.04□□□□□ -0.8
LINCMD1-201ENST00000418518 MRPS9P82933 396 aaKnown RBP10.04□□□□□ -0.8
LINCMD1-201ENST00000418518 FKBP3Q00688 224 aaKnown RBP10.04□□□□□ -0.8
LINCMD1-201ENST00000418518 PABPC4Q13310 644 aaKnown RBP eCLIP10.04□□□□□ -0.8
LINCMD1-201ENST00000418518 DGKZQ13574 1117 aa10.04□□□□□ -0.8
LINCMD1-201ENST00000418518 SYCP1Q15431 976 aa10.04□□□□□ -0.8
LINCMD1-201ENST00000418518 MEA1Q16626 185 aa10.04□□□□□ -0.8
LINCMD1-201ENST00000418518 NFIL3Q16649 462 aa10.04□□□□□ -0.8
LINCMD1-201ENST00000418518 TRIM65Q6PJ69 517 aa10.04□□□□□ -0.8
LINCMD1-201ENST00000418518 CATSPERGQ6ZRH7 1159 aa10.04□□□□□ -0.8
LINCMD1-201ENST00000418518 ARHGAP27Q6ZUM4 889 aa10.04□□□□□ -0.8
LINCMD1-201ENST00000418518 C1orf186Q6ZWK4 172 aa10.04□□□□□ -0.8
LINCMD1-201ENST00000418518 TMTC1Q8IUR5 882 aa10.04□□□□□ -0.8
LINCMD1-201ENST00000418518 RBM46Q8TBY0 533 aaKnown RBP10.04□□□□□ -0.8
LINCMD1-201ENST00000418518 ZKSCAN4Q969J2 545 aaPredicted RBP10.04□□□□□ -0.8
LINCMD1-201ENST00000418518 DYDC2Q96IM9 177 aa10.04□□□□□ -0.8
LINCMD1-201ENST00000418518 ZNF577Q9BSK1 485 aa10.04□□□□□ -0.8
LINCMD1-201ENST00000418518 RUSC1Q9BVN2 902 aa10.04□□□□□ -0.8
LINCMD1-201ENST00000418518 FGFBP2Q9BYJ0 223 aa10.04□□□□□ -0.8
LINCMD1-201ENST00000418518 AGO4Q9HCK5 861 aaKnown RBP10.04□□□□□ -0.8
LINCMD1-201ENST00000418518 JADE2Q9NQC1 790 aa10.04□□□□□ -0.8
LINCMD1-201ENST00000418518 PXMP2Q9NR77 195 aa10.04□□□□□ -0.8
LINCMD1-201ENST00000418518 KCNH7Q9NS40 1196 aa10.04□□□□□ -0.8
LINCMD1-201ENST00000418518 RGL1Q9NZL6 768 aa10.04□□□□□ -0.8
LINCMD1-201ENST00000418518 SEL1LQ9UBV2 794 aa10.04□□□□□ -0.8
LINCMD1-201ENST00000418518 ZNF214Q9UL59 606 aaPredicted RBP10.04□□□□□ -0.8
LINCMD1-201ENST00000418518 ODF2LQ9ULJ1 636 aa10.04□□□□□ -0.8
LINCMD1-201ENST00000418518 TRAF3IP3Q9Y228 551 aa10.04□□□□□ -0.8
LINCMD1-201ENST00000418518 SIK3Q9Y2K2 1263 aa10.04□□□□□ -0.8
LINCMD1-201ENST00000418518 SIP14410 1827 aa10.03□□□□□ -0.8
LINCMD1-201ENST00000418518 NPHP3-ACAD11A0A0J9YXS1 232 aa10.03□□□□□ -0.8
LINCMD1-201ENST00000418518 TTC26A0AVF1 554 aa10.03□□□□□ -0.8
LINCMD1-201ENST00000418518 RASSF10A6NK89 507 aa10.03□□□□□ -0.8
LINCMD1-201ENST00000418518 B4DLN1 442 aa10.03□□□□□ -0.8
LINCMD1-201ENST00000418518 RNF225M0QZC1 329 aaPredicted RBP10.03□□□□□ -0.8
LINCMD1-201ENST00000418518 USP2O75604 605 aaPredicted RBP10.03□□□□□ -0.8
LINCMD1-201ENST00000418518 PRKCSHP14314 528 aaPredicted RBP10.03□□□□□ -0.8
LINCMD1-201ENST00000418518 HNRNPH3P31942 346 aaKnown RBP10.03□□□□□ -0.8
LINCMD1-201ENST00000418518 KRT9P35527 623 aa10.03□□□□□ -0.8
LINCMD1-201ENST00000418518 HMGCS2P54868 508 aa10.03□□□□□ -0.8
LINCMD1-201ENST00000418518 UBXN2AP68543 259 aa10.03□□□□□ -0.8
LINCMD1-201ENST00000418518 CDK17Q00537 523 aa10.03□□□□□ -0.8
LINCMD1-201ENST00000418518 CYP4A11Q02928 519 aa10.03□□□□□ -0.8
LINCMD1-201ENST00000418518 TBC1D8BQ0IIM8 1120 aa10.03□□□□□ -0.8
LINCMD1-201ENST00000418518 PGM5Q15124 567 aa10.03□□□□□ -0.8
LINCMD1-201ENST00000418518 VWA3BQ502W6 1294 aa10.03□□□□□ -0.8
LINCMD1-201ENST00000418518 HERC4Q5GLZ8 1057 aaPredicted RBP10.03□□□□□ -0.8
LINCMD1-201ENST00000418518 RINT1Q6NUQ1 792 aa10.03□□□□□ -0.8
LINCMD1-201ENST00000418518 CYP26C1Q6V0L0 522 aa10.03□□□□□ -0.8
LINCMD1-201ENST00000418518 RAD9BQ6WBX8 426 aa10.03□□□□□ -0.8
LINCMD1-201ENST00000418518 SLC30A10Q6XR72 485 aa10.03□□□□□ -0.8
LINCMD1-201ENST00000418518 TOGARAM2Q6ZUX3 1019 aa10.03□□□□□ -0.8
LINCMD1-201ENST00000418518 SFR1Q86XK3 245 aa10.03□□□□□ -0.8
LINCMD1-201ENST00000418518 TRIM59Q8IWR1 403 aa10.03□□□□□ -0.8
LINCMD1-201ENST00000418518 RDM1Q8NG50 284 aa10.03□□□□□ -0.8
LINCMD1-201ENST00000418518 KIF18AQ8NI77 898 aa10.03□□□□□ -0.8
LINCMD1-201ENST00000418518 L3MBTL3Q96JM7 780 aaPredicted RBP10.03□□□□□ -0.8
LINCMD1-201ENST00000418518 TRERF1Q96PN7 1200 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms