RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 PLVAPQ9BX97 442 aa9.1□□□□□ -0.95
HLA-DPA1-241ENST00000417724 IGFLR1Q9H665 355 aa9.1□□□□□ -0.95
HLA-DPA1-241ENST00000417724 BCAS3Q9H6U6 928 aa9.1□□□□□ -0.95
HLA-DPA1-241ENST00000417724 DIAPH3Q9NSV4 1193 aa9.1□□□□□ -0.95
HLA-DPA1-241ENST00000417724 MAD2L2Q9UI95 211 aa9.1□□□□□ -0.95
HLA-DPA1-241ENST00000417724 MUTYHQ9UIF7 546 aa9.1□□□□□ -0.95
HLA-DPA1-241ENST00000417724 CD207Q9UJ71 328 aa9.1□□□□□ -0.95
HLA-DPA1-241ENST00000417724 TTC3P53804 2025 aa9.1□□□□□ -0.95
HLA-DPA1-241ENST00000417724 LAMA4Q16363 1823 aa9.1□□□□□ -0.95
HLA-DPA1-241ENST00000417724 ADGRA3Q8IWK6 1321 aa9.09□□□□□ -0.95
HLA-DPA1-241ENST00000417724 TECTAO75443 2155 aa9.09□□□□□ -0.95
HLA-DPA1-241ENST00000417724 DOCK5Q9H7D0 1870 aa9.09□□□□□ -0.95
HLA-DPA1-241ENST00000417724 PNMA6FA0A0J9YX94 578 aa9.09□□□□□ -0.95
HLA-DPA1-241ENST00000417724 PALM3A6NDB9 673 aaPredicted RBP9.09□□□□□ -0.95
HLA-DPA1-241ENST00000417724 STXBP3O00186 592 aa9.09□□□□□ -0.95
HLA-DPA1-241ENST00000417724 HIP1O00291 1037 aa9.09□□□□□ -0.95
HLA-DPA1-241ENST00000417724 ENPP3O14638 875 aa9.09□□□□□ -0.95
HLA-DPA1-241ENST00000417724 FIBPO43427 364 aa9.09□□□□□ -0.95
HLA-DPA1-241ENST00000417724 CHRNA1P02708 482 aa9.09□□□□□ -0.95
HLA-DPA1-241ENST00000417724 DLX2Q07687 328 aaPredicted RBP9.09□□□□□ -0.95
HLA-DPA1-241ENST00000417724 ADAM15Q13444 863 aa9.09□□□□□ -0.95
HLA-DPA1-241ENST00000417724 BTG3Q14201 252 aaPredicted RBP9.09□□□□□ -0.95
HLA-DPA1-241ENST00000417724 UTP14CQ5TAP6 766 aaKnown RBP9.09□□□□□ -0.95
HLA-DPA1-241ENST00000417724 TAF2Q6P1X5 1199 aa9.09□□□□□ -0.95
HLA-DPA1-241ENST00000417724 BMP8AQ7Z5Y6 402 aa9.09□□□□□ -0.95
HLA-DPA1-241ENST00000417724 HOMER1Q86YM7 354 aa9.09□□□□□ -0.95
HLA-DPA1-241ENST00000417724 GIMAP8Q8ND71 665 aaPredicted RBP9.09□□□□□ -0.95
HLA-DPA1-241ENST00000417724 LMBR1Q8WVP7 490 aa9.09□□□□□ -0.95
HLA-DPA1-241ENST00000417724 PRRX2Q99811 253 aa9.09□□□□□ -0.95
HLA-DPA1-241ENST00000417724 SENP7Q9BQF6 1050 aa9.09□□□□□ -0.95
HLA-DPA1-241ENST00000417724 LNPKQ9C0E8 428 aa9.09□□□□□ -0.95
HLA-DPA1-241ENST00000417724 RIOX1Q9H6W3 641 aa9.09□□□□□ -0.95
HLA-DPA1-241ENST00000417724 EHMT1Q9H9B1 1298 aa9.09□□□□□ -0.95
HLA-DPA1-241ENST00000417724 RTEL1Q9NZ71 1219 aa9.09□□□□□ -0.95
HLA-DPA1-241ENST00000417724 PLAGL2Q9UPG8 496 aa9.09□□□□□ -0.95
HLA-DPA1-241ENST00000417724 ATG2AQ2TAZ0 1938 aa9.08□□□□□ -0.96
HLA-DPA1-241ENST00000417724 DGKIO75912 1065 aa9.08□□□□□ -0.96
HLA-DPA1-241ENST00000417724 MMP1P03956 469 aa9.08□□□□□ -0.96
HLA-DPA1-241ENST00000417724 LINC00271P0C7V0 271 aa9.08□□□□□ -0.96
HLA-DPA1-241ENST00000417724 GHRP10912 638 aa9.08□□□□□ -0.96
HLA-DPA1-241ENST00000417724 NDUFV1P49821 464 aa9.08□□□□□ -0.96
HLA-DPA1-241ENST00000417724 MRPS9P82933 396 aaKnown RBP9.08□□□□□ -0.96
HLA-DPA1-241ENST00000417724 TRDNQ13061 729 aa9.08□□□□□ -0.96
HLA-DPA1-241ENST00000417724 SEC23AQ15436 765 aa9.08□□□□□ -0.96
HLA-DPA1-241ENST00000417724 NAALADL2Q58DX5 795 aa9.08□□□□□ -0.96
HLA-DPA1-241ENST00000417724 XRRA1Q6P2D8 792 aa9.08□□□□□ -0.96
HLA-DPA1-241ENST00000417724 TRIM67Q6ZTA4 783 aa9.08□□□□□ -0.96
HLA-DPA1-241ENST00000417724 TRIM50Q86XT4 487 aa9.08□□□□□ -0.96
HLA-DPA1-241ENST00000417724 P2RX5Q93086 422 aa9.08□□□□□ -0.96
HLA-DPA1-241ENST00000417724 PBXIP1Q96AQ6 731 aa9.08□□□□□ -0.96
HLA-DPA1-241ENST00000417724 PIGSQ96S52 555 aa9.08□□□□□ -0.96
HLA-DPA1-241ENST00000417724 ALG13Q9NP73 1137 aaKnown RBP9.08□□□□□ -0.96
HLA-DPA1-241ENST00000417724 TBX10O75333 385 aa9.07□□□□□ -0.96
HLA-DPA1-241ENST00000417724 EYA4O95677 639 aa9.07□□□□□ -0.96
HLA-DPA1-241ENST00000417724 RPLP2P05387 115 aaKnown RBP9.07□□□□□ -0.96
HLA-DPA1-241ENST00000417724 GTF2F1P35269 517 aaKnown RBP eCLIP9.07□□□□□ -0.96
HLA-DPA1-241ENST00000417724 PTPN5P54829 565 aa9.07□□□□□ -0.96
HLA-DPA1-241ENST00000417724 SP4Q02446 784 aa9.07□□□□□ -0.96
HLA-DPA1-241ENST00000417724 LPIN1Q14693 890 aa9.07□□□□□ -0.96
HLA-DPA1-241ENST00000417724 GRM4Q14833 912 aa9.07□□□□□ -0.96
HLA-DPA1-241ENST00000417724 FBXO47Q5MNV8 452 aa9.07□□□□□ -0.96
HLA-DPA1-241ENST00000417724 PCNX4Q63HM2 1172 aa9.07□□□□□ -0.96
HLA-DPA1-241ENST00000417724 NLRX1Q86UT6 975 aa9.07□□□□□ -0.96
HLA-DPA1-241ENST00000417724 SUGP1Q8IWZ8 645 aaKnown RBP9.07□□□□□ -0.96
HLA-DPA1-241ENST00000417724 EFHBQ8N7U6 833 aa9.07□□□□□ -0.96
HLA-DPA1-241ENST00000417724 CUL5Q93034 780 aa9.07□□□□□ -0.96
HLA-DPA1-241ENST00000417724 ZNF689Q96CS4 500 aaPredicted RBP9.07□□□□□ -0.96
HLA-DPA1-241ENST00000417724 MSLNLQ96KJ4 702 aa9.07□□□□□ -0.96
HLA-DPA1-241ENST00000417724 OSBPL3Q9H4L5 887 aa9.07□□□□□ -0.96
HLA-DPA1-241ENST00000417724 RC3H2Q9HBD1 1191 aaKnown RBP9.07□□□□□ -0.96
HLA-DPA1-241ENST00000417724 FRMPD4Q14CM0 1322 aa9.06□□□□□ -0.96
HLA-DPA1-241ENST00000417724 ZDBF2Q9HCK1 2354 aa9.06□□□□□ -0.96
HLA-DPA1-241ENST00000417724 ERICH2A1L162 156 aa9.06□□□□□ -0.96
HLA-DPA1-241ENST00000417724 TMEM221A6NGB7 291 aa9.06□□□□□ -0.96
HLA-DPA1-241ENST00000417724 M0R296 226 aa9.06□□□□□ -0.96
HLA-DPA1-241ENST00000417724 IFIT3O14879 490 aaKnown RBP9.06□□□□□ -0.96
HLA-DPA1-241ENST00000417724 LINC01565O15544 149 aa9.06□□□□□ -0.96
HLA-DPA1-241ENST00000417724 STAG3L1P0CL83 205 aa9.06□□□□□ -0.96
HLA-DPA1-241ENST00000417724 TCF7P36402 384 aaPredicted RBP9.06□□□□□ -0.96
HLA-DPA1-241ENST00000417724 COASYQ13057 564 aa9.06□□□□□ -0.96
HLA-DPA1-241ENST00000417724 PPFIA1Q13136 1202 aa9.06□□□□□ -0.96
HLA-DPA1-241ENST00000417724 SEMA3FQ13275 785 aa9.06□□□□□ -0.96
HLA-DPA1-241ENST00000417724 CAMK1Q14012 370 aa9.06□□□□□ -0.96
HLA-DPA1-241ENST00000417724 IER5Q5VY09 327 aa9.06□□□□□ -0.96
HLA-DPA1-241ENST00000417724 RUFY4Q6ZNE9 571 aa9.06□□□□□ -0.96
HLA-DPA1-241ENST00000417724 TSHZ1Q6ZSZ6 1077 aa9.06□□□□□ -0.96
HLA-DPA1-241ENST00000417724 PLEKHM2Q8IWE5 1019 aa9.06□□□□□ -0.96
HLA-DPA1-241ENST00000417724 CMTR2Q8IYT2 770 aaKnown RBP9.06□□□□□ -0.96
HLA-DPA1-241ENST00000417724 SMARCC2Q8TAQ2 1214 aa9.06□□□□□ -0.96
HLA-DPA1-241ENST00000417724 SPPL3Q8TCT6 385 aa9.06□□□□□ -0.96
HLA-DPA1-241ENST00000417724 DNAJB3Q8WWF6 145 aa9.06□□□□□ -0.96
HLA-DPA1-241ENST00000417724 SEPT1Q8WYJ6 367 aa9.06□□□□□ -0.96
HLA-DPA1-241ENST00000417724 GLG1Q92896 1179 aa9.06□□□□□ -0.96
HLA-DPA1-241ENST00000417724 CDHR1Q96JP9 859 aa9.06□□□□□ -0.96
HLA-DPA1-241ENST00000417724 SNX27Q96L92 541 aa9.06□□□□□ -0.96
HLA-DPA1-241ENST00000417724 FTHL17Q9BXU8 183 aa9.06□□□□□ -0.96
HLA-DPA1-241ENST00000417724 ERAP1Q9NZ08 941 aa9.06□□□□□ -0.96
HLA-DPA1-241ENST00000417724 TUBE1Q9UJT0 475 aa9.06□□□□□ -0.96
HLA-DPA1-241ENST00000417724 SUPT16HQ9Y5B9 1047 aaKnown RBP9.06□□□□□ -0.96
HLA-DPA1-241ENST00000417724 SQORQ9Y6N5 450 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms