RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 CYP3A7P24462 503 aa14.14□□□□□ -0.15
SKA1-203ENST00000417656 TCF7P36402 384 aaPredicted RBP14.14□□□□□ -0.15
SKA1-203ENST00000417656 PSEN2P49810 448 aa14.14□□□□□ -0.15
SKA1-203ENST00000417656 ACTR2P61160 394 aa14.14□□□□□ -0.15
SKA1-203ENST00000417656 TLE2Q04725 743 aa14.14□□□□□ -0.15
SKA1-203ENST00000417656 MFSD10Q14728 455 aa14.14□□□□□ -0.15
SKA1-203ENST00000417656 NBPF20Q3BBV1 942 aa14.14□□□□□ -0.15
SKA1-203ENST00000417656 FAM47CQ5HY64 1035 aa14.14□□□□□ -0.15
SKA1-203ENST00000417656 SLC43A3Q8NBI5 491 aa14.14□□□□□ -0.15
SKA1-203ENST00000417656 C16orf70Q9BSU1 422 aa14.14□□□□□ -0.15
SKA1-203ENST00000417656 FOXP1Q9H334 677 aaPredicted RBP14.14□□□□□ -0.15
SKA1-203ENST00000417656 ZMYND8Q9ULU4 1186 aaPredicted RBP14.14□□□□□ -0.15
SKA1-203ENST00000417656 MROH7Q68CQ1 1323 aa14.14□□□□□ -0.15
SKA1-203ENST00000417656 H3BQV1 296 aa14.13□□□□□ -0.15
SKA1-203ENST00000417656 SYN1P17600 705 aa14.13□□□□□ -0.15
SKA1-203ENST00000417656 CDK7P50613 346 aa14.13□□□□□ -0.15
SKA1-203ENST00000417656 KIAA0753Q2KHM9 967 aa14.13□□□□□ -0.15
SKA1-203ENST00000417656 LRCH2Q5VUJ6 765 aa14.13□□□□□ -0.15
SKA1-203ENST00000417656 ANKRD33Q7Z3H0 272 aa14.13□□□□□ -0.15
SKA1-203ENST00000417656 NOSTRINQ8IVI9 506 aa14.13□□□□□ -0.15
SKA1-203ENST00000417656 FAM126BQ8IXS8 530 aa14.13□□□□□ -0.15
SKA1-203ENST00000417656 ETNPPLQ8TBG4 499 aa14.13□□□□□ -0.15
SKA1-203ENST00000417656 SEPT1Q8WYJ6 367 aa14.13□□□□□ -0.15
SKA1-203ENST00000417656 SLC5A5Q92911 643 aa14.13□□□□□ -0.15
SKA1-203ENST00000417656 INTS4Q96HW7 963 aaKnown RBP14.13□□□□□ -0.15
SKA1-203ENST00000417656 NAP1L4Q99733 375 aaKnown RBP14.13□□□□□ -0.15
SKA1-203ENST00000417656 KATNAL1Q9BW62 490 aa14.13□□□□□ -0.15
SKA1-203ENST00000417656 PRDM5Q9NQX1 630 aaPredicted RBP14.13□□□□□ -0.15
SKA1-203ENST00000417656 PDLIM7Q9NR12 457 aa14.13□□□□□ -0.15
SKA1-203ENST00000417656 TCEAL9Q9UHQ7 104 aa14.13□□□□□ -0.15
SKA1-203ENST00000417656 NR2E3Q9Y5X4 410 aa14.13□□□□□ -0.15
SKA1-203ENST00000417656 EMSYQ7Z589 1322 aa14.13□□□□□ -0.15
SKA1-203ENST00000417656 WDR81Q562E7 1941 aa14.12□□□□□ -0.15
SKA1-203ENST00000417656 H0YGN5 161 aa14.12□□□□□ -0.15
SKA1-203ENST00000417656 HAS3O00219 553 aa14.12□□□□□ -0.15
SKA1-203ENST00000417656 GAS7O60861 476 aa14.12□□□□□ -0.15
SKA1-203ENST00000417656 CLTBP09497 229 aa14.12□□□□□ -0.15
SKA1-203ENST00000417656 ATP2B1P20020 1258 aa14.12□□□□□ -0.15
SKA1-203ENST00000417656 LARP1BQ659C4 914 aaKnown RBP14.12□□□□□ -0.15
SKA1-203ENST00000417656 MCTP1Q6DN14 999 aa14.12□□□□□ -0.15
SKA1-203ENST00000417656 PPP4R3AQ6IN85 833 aa14.12□□□□□ -0.15
SKA1-203ENST00000417656 NFRKBQ6P4R8 1299 aa14.12□□□□□ -0.15
SKA1-203ENST00000417656 PCYT2Q99447 389 aa14.12□□□□□ -0.15
SKA1-203ENST00000417656 TEKT3Q9BXF9 490 aa14.12□□□□□ -0.15
SKA1-203ENST00000417656 TBC1D22BQ9NU19 505 aa14.12□□□□□ -0.15
SKA1-203ENST00000417656 VPS37CA5D8V6 355 aaPredicted RBP14.11□□□□□ -0.15
SKA1-203ENST00000417656 DCDC2CA8MYV0 355 aa14.11□□□□□ -0.15
SKA1-203ENST00000417656 H3BRB1 525 aa14.11□□□□□ -0.15
SKA1-203ENST00000417656 TLR3O15455 904 aaKnown RBP14.11□□□□□ -0.15
SKA1-203ENST00000417656 CHMP2AO43633 222 aa14.11□□□□□ -0.15
SKA1-203ENST00000417656 B4GALT4O60513 344 aa14.11□□□□□ -0.15
SKA1-203ENST00000417656 SUPT20HL2P0C7V6 817 aa14.11□□□□□ -0.15
SKA1-203ENST00000417656 U2AF2P26368 475 aaKnown RBP eCLIP14.11□□□□□ -0.15
SKA1-203ENST00000417656 MARK3P27448 753 aa14.11□□□□□ -0.15
SKA1-203ENST00000417656 KRT76Q01546 638 aa14.11□□□□□ -0.15
SKA1-203ENST00000417656 FAAP100Q0VG06 881 aa14.11□□□□□ -0.15
SKA1-203ENST00000417656 SH3RF1Q7Z6J0 888 aa14.11□□□□□ -0.15
SKA1-203ENST00000417656 TOX2Q96NM4 488 aa14.11□□□□□ -0.15
SKA1-203ENST00000417656 RIT2Q99578 217 aa14.11□□□□□ -0.15
SKA1-203ENST00000417656 TANC1Q9C0D5 1861 aa14.11□□□□□ -0.15
SKA1-203ENST00000417656 TRPV6Q9H1D0 765 aa14.11□□□□□ -0.15
SKA1-203ENST00000417656 UNC45AQ9H3U1 944 aa14.11□□□□□ -0.15
SKA1-203ENST00000417656 TUT1Q9H6E5 874 aaKnown RBP14.11□□□□□ -0.15
SKA1-203ENST00000417656 KCNMB3Q9NPA1 279 aa14.11□□□□□ -0.15
SKA1-203ENST00000417656 TRMT13Q9NUP7 481 aaKnown RBP14.11□□□□□ -0.15
SKA1-203ENST00000417656 HDAC6Q9UBN7 1215 aa14.11□□□□□ -0.15
SKA1-203ENST00000417656 ZNF215Q9UL58 517 aaPredicted RBP14.11□□□□□ -0.15
SKA1-203ENST00000417656 NEMFO60524 1076 aa14.1□□□□□ -0.15
SKA1-203ENST00000417656 LGR5O75473 907 aa14.1□□□□□ -0.15
SKA1-203ENST00000417656 PSMD10O75832 226 aa14.1□□□□□ -0.15
SKA1-203ENST00000417656 CD4P01730 458 aa14.1□□□□□ -0.15
SKA1-203ENST00000417656 NBR1Q14596 966 aa14.1□□□□□ -0.15
SKA1-203ENST00000417656 TTC38Q5R3I4 469 aa14.1□□□□□ -0.15
SKA1-203ENST00000417656 ZNF746Q6NUN9 644 aaPredicted RBP14.1□□□□□ -0.15
SKA1-203ENST00000417656 SESTD1Q86VW0 696 aa14.1□□□□□ -0.15
SKA1-203ENST00000417656 CCDC60Q8IWA6 550 aaPredicted RBP14.1□□□□□ -0.15
SKA1-203ENST00000417656 C7orf31Q8N865 590 aa14.1□□□□□ -0.15
SKA1-203ENST00000417656 GLG1Q92896 1179 aa14.1□□□□□ -0.15
SKA1-203ENST00000417656 SEZ6LQ9BYH1 1024 aa14.1□□□□□ -0.15
SKA1-203ENST00000417656 TBX21Q9UL17 535 aa14.1□□□□□ -0.15
SKA1-203ENST00000417656 NOL7Q9UMY1 257 aaKnown RBP14.1□□□□□ -0.15
SKA1-203ENST00000417656 TRIM43BA6NCK2 446 aa14.09□□□□□ -0.15
SKA1-203ENST00000417656 WDR64B1ANS9 1081 aa14.09□□□□□ -0.15
SKA1-203ENST00000417656 BACH1O14867 736 aa14.09□□□□□ -0.15
SKA1-203ENST00000417656 ATG7O95352 703 aa14.09□□□□□ -0.15
SKA1-203ENST00000417656 HSP90AA1P07900 732 aaKnown RBP14.09□□□□□ -0.15
SKA1-203ENST00000417656 SMIM10L2AP0DMW4 78 aa14.09□□□□□ -0.15
SKA1-203ENST00000417656 SMIM10L2BP0DMW5 78 aa14.09□□□□□ -0.15
SKA1-203ENST00000417656 PDCP20941 246 aa14.09□□□□□ -0.15
SKA1-203ENST00000417656 MCM7P33993 719 aa14.09□□□□□ -0.15
SKA1-203ENST00000417656 PTPN11Q06124 597 aaPredicted RBP14.09□□□□□ -0.15
SKA1-203ENST00000417656 CALCRLQ16602 461 aa14.09□□□□□ -0.15
SKA1-203ENST00000417656 GDF6Q6KF10 455 aaPredicted RBP14.09□□□□□ -0.15
SKA1-203ENST00000417656 MIS18BP1Q6P0N0 1132 aa14.09□□□□□ -0.15
SKA1-203ENST00000417656 ABHD15Q6UXT9 468 aa14.09□□□□□ -0.15
SKA1-203ENST00000417656 SMAP1Q8IYB5 467 aaPredicted RBP14.09□□□□□ -0.15
SKA1-203ENST00000417656 HAS1Q92839 578 aa14.09□□□□□ -0.15
SKA1-203ENST00000417656 TRIM43Q96BQ3 446 aaPredicted RBP14.09□□□□□ -0.15
SKA1-203ENST00000417656 FAM20AQ96MK3 541 aa14.09□□□□□ -0.15
SKA1-203ENST00000417656 SMARCAD1Q9H4L7 1026 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms