RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 CCDC85BQ15834 202 aaPredicted RBP20.12■□□□□ 0.81
PDLIM2-208ENST00000416159 TCTN1Q2MV58 587 aa20.12■□□□□ 0.81
PDLIM2-208ENST00000416159 TYW1BQ6NUM6 668 aa20.12■□□□□ 0.81
PDLIM2-208ENST00000416159 BLOC1S2Q6QNY1 142 aa20.12■□□□□ 0.81
PDLIM2-208ENST00000416159 Q6ZUG5 572 aa20.12■□□□□ 0.81
PDLIM2-208ENST00000416159 DBF4BQ8NFT6 615 aa20.12■□□□□ 0.81
PDLIM2-208ENST00000416159 SYMPKQ92797 1274 aaKnown RBP20.12■□□□□ 0.81
PDLIM2-208ENST00000416159 JAKMIP1Q96N16 626 aaKnown RBP20.12■□□□□ 0.81
PDLIM2-208ENST00000416159 SNX14Q9Y5W7 946 aa20.12■□□□□ 0.81
PDLIM2-208ENST00000416159 A0A0C4DFX4 3053 aa20.11■□□□□ 0.81
PDLIM2-208ENST00000416159 REC8O95072 547 aa20.11■□□□□ 0.81
PDLIM2-208ENST00000416159 GJB5O95377 273 aa20.11■□□□□ 0.81
PDLIM2-208ENST00000416159 POU3F3P20264 500 aaPredicted RBP20.11■□□□□ 0.81
PDLIM2-208ENST00000416159 METAP2P50579 478 aaKnown RBP eCLIP20.11■□□□□ 0.81
PDLIM2-208ENST00000416159 AP3B2Q13367 1082 aa20.11■□□□□ 0.81
PDLIM2-208ENST00000416159 PLEKHG4Q58EX7 1191 aa20.11■□□□□ 0.81
PDLIM2-208ENST00000416159 LMBR1Q8WVP7 490 aa20.11■□□□□ 0.81
PDLIM2-208ENST00000416159 RAD9AQ99638 391 aa20.11■□□□□ 0.81
PDLIM2-208ENST00000416159 ANO3Q9BYT9 981 aa20.11■□□□□ 0.81
PDLIM2-208ENST00000416159 SMARCAD1Q9H4L7 1026 aa20.11■□□□□ 0.81
PDLIM2-208ENST00000416159 CERS4Q9HA82 394 aa20.11■□□□□ 0.81
PDLIM2-208ENST00000416159 ERAP1Q9NZ08 941 aa20.11■□□□□ 0.81
PDLIM2-208ENST00000416159 PKD2L1Q9P0L9 805 aa20.11■□□□□ 0.81
PDLIM2-208ENST00000416159 PTPRSQ13332 1948 aa20.11■□□□□ 0.81
PDLIM2-208ENST00000416159 GTPBP6O43824 516 aaPredicted RBP20.1■□□□□ 0.81
PDLIM2-208ENST00000416159 CPA1P15085 419 aa20.1■□□□□ 0.81
PDLIM2-208ENST00000416159 PSMA5P28066 241 aa20.1■□□□□ 0.81
PDLIM2-208ENST00000416159 ADD1P35611 737 aaKnown RBP20.1■□□□□ 0.81
PDLIM2-208ENST00000416159 APOBRQ0VD83 1088 aa20.1■□□□□ 0.81
PDLIM2-208ENST00000416159 FBXL16Q8N461 479 aa20.1■□□□□ 0.81
PDLIM2-208ENST00000416159 ARNTL2Q8WYA1 636 aa20.1■□□□□ 0.81
PDLIM2-208ENST00000416159 SEPT8Q92599 483 aa20.1■□□□□ 0.81
PDLIM2-208ENST00000416159 GLG1Q92896 1179 aa20.1■□□□□ 0.81
PDLIM2-208ENST00000416159 BRF1Q92994 677 aa20.1■□□□□ 0.81
PDLIM2-208ENST00000416159 PRDM6Q9NQX0 595 aa20.1■□□□□ 0.81
PDLIM2-208ENST00000416159 KCNH7Q9NS40 1196 aa20.1■□□□□ 0.81
PDLIM2-208ENST00000416159 RFXAPO00287 272 aa20.09■□□□□ 0.81
PDLIM2-208ENST00000416159 ARHGEF15O94989 841 aa20.09■□□□□ 0.81
PDLIM2-208ENST00000416159 AMHP03971 560 aa20.09■□□□□ 0.81
PDLIM2-208ENST00000416159 PFKFB3Q16875 520 aaPredicted RBP20.09■□□□□ 0.81
PDLIM2-208ENST00000416159 TJAP1Q5JTD0 557 aa20.09■□□□□ 0.81
PDLIM2-208ENST00000416159 FAM26DQ5JW98 314 aa20.09■□□□□ 0.81
PDLIM2-208ENST00000416159 TMCO2Q7Z6W1 182 aaPredicted RBP20.09■□□□□ 0.81
PDLIM2-208ENST00000416159 ATXN2LQ8WWM7 1075 aaKnown RBP20.09■□□□□ 0.81
PDLIM2-208ENST00000416159 PGBD1Q96JS3 809 aa20.09■□□□□ 0.81
PDLIM2-208ENST00000416159 SDF4Q9BRK5 362 aa20.09■□□□□ 0.81
PDLIM2-208ENST00000416159 TSPYL2Q9H2G4 693 aaPredicted RBP20.09■□□□□ 0.81
PDLIM2-208ENST00000416159 JPH1Q9HDC5 661 aaPredicted RBP20.09■□□□□ 0.81
PDLIM2-208ENST00000416159 THEGQ9P2T0 379 aa20.09■□□□□ 0.81
PDLIM2-208ENST00000416159 SLC9A2Q9UBY0 812 aa20.09■□□□□ 0.81
PDLIM2-208ENST00000416159 NFASCO94856 1347 aa20.08■□□□□ 0.81
PDLIM2-208ENST00000416159 EPB41L2O43491 1005 aaKnown RBP20.08■□□□□ 0.81
PDLIM2-208ENST00000416159 CTSHP09668 335 aa20.08■□□□□ 0.81
PDLIM2-208ENST00000416159 SCG2P13521 617 aa20.08■□□□□ 0.81
PDLIM2-208ENST00000416159 RPS6KB1P23443 525 aa20.08■□□□□ 0.81
PDLIM2-208ENST00000416159 SREBF1P36956 1147 aa20.08■□□□□ 0.81
PDLIM2-208ENST00000416159 CLK2P49760 499 aaKnown RBP20.08■□□□□ 0.81
PDLIM2-208ENST00000416159 PPFIA1Q13136 1202 aa20.08■□□□□ 0.81
PDLIM2-208ENST00000416159 CEP55Q53EZ4 464 aa20.08■□□□□ 0.81
PDLIM2-208ENST00000416159 TAF2Q6P1X5 1199 aa20.08■□□□□ 0.81
PDLIM2-208ENST00000416159 RPAINQ86UA6 219 aa20.08■□□□□ 0.81
PDLIM2-208ENST00000416159 CYP2W1Q8TAV3 490 aa20.08■□□□□ 0.81
PDLIM2-208ENST00000416159 TNPO1Q92973 898 aaKnown RBP20.08■□□□□ 0.81
PDLIM2-208ENST00000416159 LCHNA4D1U4 455 aa20.07■□□□□ 0.8
PDLIM2-208ENST00000416159 EPOPA6NHQ4 379 aa20.07■□□□□ 0.8
PDLIM2-208ENST00000416159 MEIS1O00470 390 aa20.07■□□□□ 0.8
PDLIM2-208ENST00000416159 PRPF3O43395 683 aaKnown RBP20.07■□□□□ 0.8
PDLIM2-208ENST00000416159 ZNF76P36508 570 aa20.07■□□□□ 0.8
PDLIM2-208ENST00000416159 MKRN4PQ13434 485 aaPredicted RBP20.07■□□□□ 0.8
PDLIM2-208ENST00000416159 GRIK4Q16099 956 aa20.07■□□□□ 0.8
PDLIM2-208ENST00000416159 MCTP2Q6DN12 878 aa20.07■□□□□ 0.8
PDLIM2-208ENST00000416159 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.07■□□□□ 0.8
PDLIM2-208ENST00000416159 RSPH3Q86UC2 560 aa20.07■□□□□ 0.8
PDLIM2-208ENST00000416159 MICALL1Q8N3F8 863 aa20.07■□□□□ 0.8
PDLIM2-208ENST00000416159 CCDC12Q8WUD4 166 aaPredicted RBP20.07■□□□□ 0.8
PDLIM2-208ENST00000416159 APBB2Q92870 758 aa20.07■□□□□ 0.8
PDLIM2-208ENST00000416159 AGXT2Q9BYV1 514 aa20.07■□□□□ 0.8
PDLIM2-208ENST00000416159 AZI2Q9H6S1 392 aa20.07■□□□□ 0.8
PDLIM2-208ENST00000416159 TMEM260Q9NX78 707 aa20.07■□□□□ 0.8
PDLIM2-208ENST00000416159 MTCH2Q9Y6C9 303 aa20.07■□□□□ 0.8
PDLIM2-208ENST00000416159 PRRC2BQ5JSZ5 2229 aaKnown RBP20.07■□□□□ 0.8
PDLIM2-208ENST00000416159 CHD9Q3L8U1 2897 aa20.07■□□□□ 0.8
PDLIM2-208ENST00000416159 MICAL3Q7RTP6 2002 aa20.07■□□□□ 0.8
PDLIM2-208ENST00000416159 ESYT2A0FGR8 921 aa20.06■□□□□ 0.8
PDLIM2-208ENST00000416159 RRN3P2A6NIE6 340 aa20.06■□□□□ 0.8
PDLIM2-208ENST00000416159 ARP10275 920 aa20.06■□□□□ 0.8
PDLIM2-208ENST00000416159 MARK3P27448 753 aa20.06■□□□□ 0.8
PDLIM2-208ENST00000416159 FAM117BQ6P1L5 589 aa20.06■□□□□ 0.8
PDLIM2-208ENST00000416159 NIPA1Q7RTP0 329 aa20.06■□□□□ 0.8
PDLIM2-208ENST00000416159 MYOCDQ8IZQ8 938 aa20.06■□□□□ 0.8
PDLIM2-208ENST00000416159 TGS1Q96RS0 853 aaKnown RBP20.06■□□□□ 0.8
PDLIM2-208ENST00000416159 PCYT2Q99447 389 aa20.06■□□□□ 0.8
PDLIM2-208ENST00000416159 C6orf50Q9HD87 102 aa20.06■□□□□ 0.8
PDLIM2-208ENST00000416159 INSL6Q9Y581 213 aa20.06■□□□□ 0.8
PDLIM2-208ENST00000416159 UNC80Q8N2C7 3258 aa20.06■□□□□ 0.8
PDLIM2-208ENST00000416159 NID2Q14112 1375 aa20.06■□□□□ 0.8
PDLIM2-208ENST00000416159 MBLAC1A4D2B0 266 aaPredicted RBP20.05■□□□□ 0.8
PDLIM2-208ENST00000416159 ACTR2P61160 394 aa20.05■□□□□ 0.8
PDLIM2-208ENST00000416159 ERVK-21P61565 698 aa20.05■□□□□ 0.8
PDLIM2-208ENST00000416159 MRPS5P82675 430 aaKnown RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms