RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 CCDC12Q8WUD4 166 aaPredicted RBP23.36■■□□□ 1.33
PTPRU-203ENST00000415600 PPM1EQ8WY54 764 aa23.36■■□□□ 1.33
PTPRU-203ENST00000415600 ERAP1Q9NZ08 941 aa23.36■■□□□ 1.33
PTPRU-203ENST00000415600 UNC80Q8N2C7 3258 aa23.36■■□□□ 1.33
PTPRU-203ENST00000415600 KCNA2P16389 499 aa23.35■■□□□ 1.33
PTPRU-203ENST00000415600 ITGB5P18084 799 aa23.35■■□□□ 1.33
PTPRU-203ENST00000415600 HSPA4P34932 840 aa23.35■■□□□ 1.33
PTPRU-203ENST00000415600 AP3B2Q13367 1082 aa23.35■■□□□ 1.33
PTPRU-203ENST00000415600 MCTP2Q6DN12 878 aa23.35■■□□□ 1.33
PTPRU-203ENST00000415600 GLG1Q92896 1179 aa23.35■■□□□ 1.33
PTPRU-203ENST00000415600 JAKMIP1Q96N16 626 aaKnown RBP23.35■■□□□ 1.33
PTPRU-203ENST00000415600 SDF4Q9BRK5 362 aa23.35■■□□□ 1.33
PTPRU-203ENST00000415600 BCAS3Q9H6U6 928 aa23.35■■□□□ 1.33
PTPRU-203ENST00000415600 SETD4Q9NVD3 440 aa23.35■■□□□ 1.33
PTPRU-203ENST00000415600 BARHL2Q9NY43 387 aa23.35■■□□□ 1.33
PTPRU-203ENST00000415600 TREHO43280 583 aa23.35■■□□□ 1.33
PTPRU-203ENST00000415600 RPLP2P05387 115 aaKnown RBP23.35■■□□□ 1.33
PTPRU-203ENST00000415600 ARHGAP4P98171 946 aa23.35■■□□□ 1.33
PTPRU-203ENST00000415600 AKAP17AQ02040 695 aaKnown RBP23.35■■□□□ 1.33
PTPRU-203ENST00000415600 TAF2Q6P1X5 1199 aa23.35■■□□□ 1.33
PTPRU-203ENST00000415600 RSPH3Q86UC2 560 aa23.35■■□□□ 1.33
PTPRU-203ENST00000415600 COL25A1Q9BXS0 654 aaPredicted RBP23.35■■□□□ 1.33
PTPRU-203ENST00000415600 SMARCAD1Q9H4L7 1026 aa23.35■■□□□ 1.33
PTPRU-203ENST00000415600 JPH1Q9HDC5 661 aaPredicted RBP23.35■■□□□ 1.33
PTPRU-203ENST00000415600 GBF1Q92538 1859 aa23.35■■□□□ 1.33
PTPRU-203ENST00000415600 TET1Q8NFU7 2136 aa23.34■■□□□ 1.33
PTPRU-203ENST00000415600 SMCO2A6NFE2 343 aa23.34■■□□□ 1.33
PTPRU-203ENST00000415600 AMHP03971 560 aa23.34■■□□□ 1.33
PTPRU-203ENST00000415600 TRIM50Q86XT4 487 aa23.34■■□□□ 1.33
PTPRU-203ENST00000415600 SEPT8Q92599 483 aa23.34■■□□□ 1.33
PTPRU-203ENST00000415600 KCNB2Q92953 911 aa23.34■■□□□ 1.33
PTPRU-203ENST00000415600 ANP32EQ9BTT0 268 aa23.34■■□□□ 1.33
PTPRU-203ENST00000415600 AZI2Q9H6S1 392 aa23.34■■□□□ 1.33
PTPRU-203ENST00000415600 ZNF76P36508 570 aa23.33■■□□□ 1.33
PTPRU-203ENST00000415600 ADGRE1Q14246 886 aa23.33■■□□□ 1.33
PTPRU-203ENST00000415600 GPNMBQ14956 572 aa23.33■■□□□ 1.33
PTPRU-203ENST00000415600 WNT8BQ93098 351 aa23.33■■□□□ 1.33
PTPRU-203ENST00000415600 RAD9AQ99638 391 aa23.33■■□□□ 1.33
PTPRU-203ENST00000415600 MXRA8Q9BRK3 442 aa23.33■■□□□ 1.33
PTPRU-203ENST00000415600 PKD2L1Q9P0L9 805 aa23.33■■□□□ 1.33
PTPRU-203ENST00000415600 THEGQ9P2T0 379 aa23.33■■□□□ 1.33
PTPRU-203ENST00000415600 STXBP3O00186 592 aa23.32■■□□□ 1.32
PTPRU-203ENST00000415600 CD2BP2O95400 341 aaKnown RBP23.32■■□□□ 1.32
PTPRU-203ENST00000415600 FUT2Q10981 343 aa23.32■■□□□ 1.32
PTPRU-203ENST00000415600 PPFIA1Q13136 1202 aa23.32■■□□□ 1.32
PTPRU-203ENST00000415600 HIC1Q14526 733 aa23.32■■□□□ 1.32
PTPRU-203ENST00000415600 TJAP1Q5JTD0 557 aa23.32■■□□□ 1.32
PTPRU-203ENST00000415600 TRAF7Q6Q0C0 670 aa23.32■■□□□ 1.32
PTPRU-203ENST00000415600 Q6ZUG5 572 aa23.32■■□□□ 1.32
PTPRU-203ENST00000415600 IL27Q8NEV9 243 aa23.32■■□□□ 1.32
PTPRU-203ENST00000415600 ATXN2LQ8WWM7 1075 aaKnown RBP23.32■■□□□ 1.32
PTPRU-203ENST00000415600 APBB2Q92870 758 aa23.32■■□□□ 1.32
PTPRU-203ENST00000415600 ANO3Q9BYT9 981 aa23.32■■□□□ 1.32
PTPRU-203ENST00000415600 KCNH7Q9NS40 1196 aa23.32■■□□□ 1.32
PTPRU-203ENST00000415600 K7ELQ4 463 aaPredicted RBP23.31■■□□□ 1.32
PTPRU-203ENST00000415600 ATP9AO75110 1047 aa23.31■■□□□ 1.32
PTPRU-203ENST00000415600 GJB5O95377 273 aa23.31■■□□□ 1.32
PTPRU-203ENST00000415600 TAP1Q03518 808 aa23.31■■□□□ 1.32
PTPRU-203ENST00000415600 CEP55Q53EZ4 464 aa23.31■■□□□ 1.32
PTPRU-203ENST00000415600 FBXL16Q8N461 479 aa23.31■■□□□ 1.32
PTPRU-203ENST00000415600 USP38Q8NB14 1042 aa23.31■■□□□ 1.32
PTPRU-203ENST00000415600 LMBR1Q8WVP7 490 aa23.31■■□□□ 1.32
PTPRU-203ENST00000415600 ARNTL2Q8WYA1 636 aa23.31■■□□□ 1.32
PTPRU-203ENST00000415600 BRF1Q92994 677 aa23.31■■□□□ 1.32
PTPRU-203ENST00000415600 SLC9A2Q9UBY0 812 aa23.31■■□□□ 1.32
PTPRU-203ENST00000415600 SNX14Q9Y5W7 946 aa23.31■■□□□ 1.32
PTPRU-203ENST00000415600 NFASCO94856 1347 aa23.31■■□□□ 1.32
PTPRU-203ENST00000415600 ST18O60284 1047 aa23.31■■□□□ 1.32
PTPRU-203ENST00000415600 SCG2P13521 617 aa23.31■■□□□ 1.32
PTPRU-203ENST00000415600 CCDC85BQ15834 202 aaPredicted RBP23.31■■□□□ 1.32
PTPRU-203ENST00000415600 PFKFB3Q16875 520 aaPredicted RBP23.31■■□□□ 1.32
PTPRU-203ENST00000415600 DBF4BQ8NFT6 615 aa23.31■■□□□ 1.32
PTPRU-203ENST00000415600 C6orf50Q9HD87 102 aa23.31■■□□□ 1.32
PTPRU-203ENST00000415600 CHD9Q3L8U1 2897 aa23.3■■□□□ 1.32
PTPRU-203ENST00000415600 RRN3P2A6NIE6 340 aa23.3■■□□□ 1.32
PTPRU-203ENST00000415600 CTSHP09668 335 aa23.3■■□□□ 1.32
PTPRU-203ENST00000415600 RPS6KB1P23443 525 aa23.3■■□□□ 1.32
PTPRU-203ENST00000415600 GNA11P29992 359 aa23.3■■□□□ 1.32
PTPRU-203ENST00000415600 CDC27P30260 824 aa23.3■■□□□ 1.32
PTPRU-203ENST00000415600 DEFB103AP81534 67 aa23.3■■□□□ 1.32
PTPRU-203ENST00000415600 APOBRQ0VD83 1088 aa23.3■■□□□ 1.32
PTPRU-203ENST00000415600 MBTPS1Q14703 1052 aa23.3■■□□□ 1.32
PTPRU-203ENST00000415600 PLEKHG4Q58EX7 1191 aa23.3■■□□□ 1.32
PTPRU-203ENST00000415600 MICALL1Q8N3F8 863 aa23.3■■□□□ 1.32
PTPRU-203ENST00000415600 INSL6Q9Y581 213 aa23.3■■□□□ 1.32
PTPRU-203ENST00000415600 POU3F3P20264 500 aaPredicted RBP23.29■■□□□ 1.32
PTPRU-203ENST00000415600 SREBF1P36956 1147 aa23.29■■□□□ 1.32
PTPRU-203ENST00000415600 RPAINQ86UA6 219 aa23.29■■□□□ 1.32
PTPRU-203ENST00000415600 BICD2Q8TD16 824 aa23.29■■□□□ 1.32
PTPRU-203ENST00000415600 CERS4Q9HA82 394 aa23.29■■□□□ 1.32
PTPRU-203ENST00000415600 FAM217BQ9NTX9 383 aaPredicted RBP23.29■■□□□ 1.32
PTPRU-203ENST00000415600 TUBE1Q9UJT0 475 aa23.29■■□□□ 1.32
PTPRU-203ENST00000415600 KAT6AQ92794 2004 aa23.29■■□□□ 1.32
PTPRU-203ENST00000415600 GSTTP1A0A1W2PQM5 241 aa23.28■■□□□ 1.32
PTPRU-203ENST00000415600 ESYT2A0FGR8 921 aa23.28■■□□□ 1.32
PTPRU-203ENST00000415600 MARK3P27448 753 aa23.28■■□□□ 1.32
PTPRU-203ENST00000415600 ADD1P35611 737 aaKnown RBP23.28■■□□□ 1.32
PTPRU-203ENST00000415600 GRIK4Q16099 956 aa23.28■■□□□ 1.32
PTPRU-203ENST00000415600 TYW1BQ6NUM6 668 aa23.28■■□□□ 1.32
PTPRU-203ENST00000415600 NIPA1Q7RTP0 329 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms