RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 CYFIP1Q7L576 1253 aa10.87□□□□□ -0.67
RIF1-202ENST00000414861 IQUBQ8NA54 791 aa10.87□□□□□ -0.67
RIF1-202ENST00000414861 SDF4Q9BRK5 362 aa10.87□□□□□ -0.67
RIF1-202ENST00000414861 JPH1Q9HDC5 661 aaPredicted RBP10.87□□□□□ -0.67
RIF1-202ENST00000414861 WRAP73Q9P2S5 460 aaPredicted RBP10.87□□□□□ -0.67
RIF1-202ENST00000414861 NFASCO94856 1347 aa10.86□□□□□ -0.67
RIF1-202ENST00000414861 SYNGAP1Q96PV0 1343 aa10.86□□□□□ -0.67
RIF1-202ENST00000414861 RPA1P27694 616 aa10.86□□□□□ -0.67
RIF1-202ENST00000414861 RGS2P41220 211 aa10.86□□□□□ -0.67
RIF1-202ENST00000414861 PRKCZQ05513 592 aa10.86□□□□□ -0.67
RIF1-202ENST00000414861 CTTNQ14247 550 aaKnown RBP10.86□□□□□ -0.67
RIF1-202ENST00000414861 HYIQ5T013 277 aa10.86□□□□□ -0.67
RIF1-202ENST00000414861 GJC2Q5T442 439 aaPredicted RBP10.86□□□□□ -0.67
RIF1-202ENST00000414861 HAUS3Q68CZ6 603 aa10.86□□□□□ -0.67
RIF1-202ENST00000414861 CCDC62Q6P9F0 684 aa10.86□□□□□ -0.67
RIF1-202ENST00000414861 MIER3Q7Z3K6 550 aa10.86□□□□□ -0.67
RIF1-202ENST00000414861 CD99L2Q8TCZ2 262 aa10.86□□□□□ -0.67
RIF1-202ENST00000414861 COPS5Q92905 334 aa10.86□□□□□ -0.67
RIF1-202ENST00000414861 CALML4Q96GE6 196 aa10.86□□□□□ -0.67
RIF1-202ENST00000414861 DYDC2Q96IM9 177 aa10.86□□□□□ -0.67
RIF1-202ENST00000414861 HSD17B14Q9BPX1 270 aa10.86□□□□□ -0.67
RIF1-202ENST00000414861 CCDC39Q9UFE4 941 aa10.86□□□□□ -0.67
RIF1-202ENST00000414861 TSKSQ9UJT2 592 aa10.86□□□□□ -0.67
RIF1-202ENST00000414861 DDX41Q9UJV9 622 aaKnown RBP10.86□□□□□ -0.67
RIF1-202ENST00000414861 KDM3AQ9Y4C1 1321 aa10.86□□□□□ -0.67
RIF1-202ENST00000414861 GPR25O00155 361 aa10.86□□□□□ -0.67
RIF1-202ENST00000414861 FARP2O94887 1054 aaPredicted RBP10.86□□□□□ -0.67
RIF1-202ENST00000414861 IGHA2P01877 340 aa10.86□□□□□ -0.67
RIF1-202ENST00000414861 CYP2C19P33261 490 aa10.86□□□□□ -0.67
RIF1-202ENST00000414861 AFMP43652 599 aa10.86□□□□□ -0.67
RIF1-202ENST00000414861 FLT3LGP49771 235 aa10.86□□□□□ -0.67
RIF1-202ENST00000414861 MDM2Q00987 491 aaPredicted RBP10.86□□□□□ -0.67
RIF1-202ENST00000414861 KRT76Q01546 638 aa10.86□□□□□ -0.67
RIF1-202ENST00000414861 UGCGQ16739 394 aa10.86□□□□□ -0.67
RIF1-202ENST00000414861 SH3RF1Q7Z6J0 888 aa10.86□□□□□ -0.67
RIF1-202ENST00000414861 BANK1Q8NDB2 785 aa10.86□□□□□ -0.67
RIF1-202ENST00000414861 ERMNQ8TAM6 284 aa10.86□□□□□ -0.67
RIF1-202ENST00000414861 PAGE5Q96GU1 130 aa10.86□□□□□ -0.67
RIF1-202ENST00000414861 CDK5RAP3Q96JB5 506 aa10.86□□□□□ -0.67
RIF1-202ENST00000414861 SENP7Q9BQF6 1050 aa10.86□□□□□ -0.67
RIF1-202ENST00000414861 VTA1Q9NP79 307 aa10.86□□□□□ -0.67
RIF1-202ENST00000414861 SLC5A4Q9NY91 659 aa10.86□□□□□ -0.67
RIF1-202ENST00000414861 SLC9A2Q9UBY0 812 aa10.86□□□□□ -0.67
RIF1-202ENST00000414861 KIAA1024Q9UPX6 916 aa10.86□□□□□ -0.67
RIF1-202ENST00000414861 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.85□□□□□ -0.67
RIF1-202ENST00000414861 ADCY6O43306 1168 aa10.85□□□□□ -0.67
RIF1-202ENST00000414861 SLITRK3O94933 977 aa10.85□□□□□ -0.67
RIF1-202ENST00000414861 GGPS1O95749 300 aa10.85□□□□□ -0.67
RIF1-202ENST00000414861 PSMC6P62333 389 aa10.85□□□□□ -0.67
RIF1-202ENST00000414861 EPHA7Q15375 998 aa10.85□□□□□ -0.67
RIF1-202ENST00000414861 PRAMEF19Q5SWL8 479 aa10.85□□□□□ -0.67
RIF1-202ENST00000414861 ZNF746Q6NUN9 644 aaPredicted RBP10.85□□□□□ -0.67
RIF1-202ENST00000414861 CEP57L1Q8IYX8 460 aa10.85□□□□□ -0.67
RIF1-202ENST00000414861 LXNQ9BS40 222 aa10.85□□□□□ -0.67
RIF1-202ENST00000414861 POLR3CQ9BUI4 534 aaPredicted RBP10.85□□□□□ -0.67
RIF1-202ENST00000414861 SAMM50Q9Y512 469 aa10.85□□□□□ -0.67
RIF1-202ENST00000414861 WDR64B1ANS9 1081 aa10.85□□□□□ -0.67
RIF1-202ENST00000414861 E9PMD0 336 aa10.85□□□□□ -0.67
RIF1-202ENST00000414861 TGFB3P10600 412 aa10.85□□□□□ -0.67
RIF1-202ENST00000414861 ADCYAP1R1P41586 468 aa10.85□□□□□ -0.67
RIF1-202ENST00000414861 ACTR2P61160 394 aa10.85□□□□□ -0.67
RIF1-202ENST00000414861 MCM6Q14566 821 aa10.85□□□□□ -0.67
RIF1-202ENST00000414861 POSTNQ15063 836 aa10.85□□□□□ -0.67
RIF1-202ENST00000414861 OLFML2BQ68BL8 750 aa10.85□□□□□ -0.67
RIF1-202ENST00000414861 MSL3Q8N5Y2 521 aaKnown RBP10.85□□□□□ -0.67
RIF1-202ENST00000414861 SCFD2Q8WU76 684 aa10.85□□□□□ -0.67
RIF1-202ENST00000414861 RAD54LQ92698 747 aa10.85□□□□□ -0.67
RIF1-202ENST00000414861 PYM1Q9BRP8 204 aaKnown RBP10.85□□□□□ -0.67
RIF1-202ENST00000414861 KBTBD4Q9NVX7 518 aa10.85□□□□□ -0.67
RIF1-202ENST00000414861 USP25Q9UHP3 1055 aa10.85□□□□□ -0.67
RIF1-202ENST00000414861 ZHX1Q9UKY1 873 aaPredicted RBP10.85□□□□□ -0.67
RIF1-202ENST00000414861 LOXHD1Q8IVV2 1947 aa10.85□□□□□ -0.67
RIF1-202ENST00000414861 ZBTB39O15060 712 aa10.84□□□□□ -0.67
RIF1-202ENST00000414861 TXNP10599 105 aaKnown RBP10.84□□□□□ -0.67
RIF1-202ENST00000414861 JAK3P52333 1124 aa10.84□□□□□ -0.67
RIF1-202ENST00000414861 ACVR2BQ13705 512 aa10.84□□□□□ -0.67
RIF1-202ENST00000414861 TPH2Q8IWU9 490 aa10.84□□□□□ -0.67
RIF1-202ENST00000414861 TRIB2Q92519 343 aa10.84□□□□□ -0.67
RIF1-202ENST00000414861 LARP4BQ92615 738 aaKnown RBP10.84□□□□□ -0.67
RIF1-202ENST00000414861 NT5C3AQ9H0P0 336 aa10.84□□□□□ -0.67
RIF1-202ENST00000414861 BLZF1Q9H2G9 400 aa10.84□□□□□ -0.67
RIF1-202ENST00000414861 TUFT1Q9NNX1 390 aa10.84□□□□□ -0.67
RIF1-202ENST00000414861 SAGE1Q9NXZ1 904 aa10.84□□□□□ -0.67
RIF1-202ENST00000414861 STK17AQ9UEE5 414 aa10.84□□□□□ -0.67
RIF1-202ENST00000414861 ARID2Q68CP9 1835 aa10.84□□□□□ -0.67
RIF1-202ENST00000414861 RBM47A0AV96 593 aaKnown RBP10.84□□□□□ -0.67
RIF1-202ENST00000414861 CTAGE5O15320 804 aa10.84□□□□□ -0.67
RIF1-202ENST00000414861 ZNF445P59923 1031 aa10.84□□□□□ -0.67
RIF1-202ENST00000414861 NEDD9Q14511 834 aa10.84□□□□□ -0.67
RIF1-202ENST00000414861 DHX8Q14562 1220 aaKnown RBP10.84□□□□□ -0.67
RIF1-202ENST00000414861 TTLL4Q14679 1199 aa10.84□□□□□ -0.67
RIF1-202ENST00000414861 CELF3Q5SZQ8 465 aaKnown RBP10.84□□□□□ -0.67
RIF1-202ENST00000414861 METTL7BQ6UX53 244 aa10.84□□□□□ -0.67
RIF1-202ENST00000414861 CCDC60Q8IWA6 550 aaPredicted RBP10.84□□□□□ -0.67
RIF1-202ENST00000414861 PIGOQ8TEQ8 1089 aa10.84□□□□□ -0.67
RIF1-202ENST00000414861 ZNF296Q8WUU4 475 aaPredicted RBP10.84□□□□□ -0.67
RIF1-202ENST00000414861 LENG1Q96BZ8 264 aaPredicted RBP10.84□□□□□ -0.67
RIF1-202ENST00000414861 FUCA2Q9BTY2 467 aa10.84□□□□□ -0.67
RIF1-202ENST00000414861 ABHD16BQ9H3Z7 469 aa10.84□□□□□ -0.67
RIF1-202ENST00000414861 KIAA1468Q9P260 1216 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms