RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 EIF2AK2P19525 551 aaKnown RBP18.48■□□□□ 0.55
CPNE1-208ENST00000414711 DUSP6Q16828 381 aa18.48■□□□□ 0.55
CPNE1-208ENST00000414711 CWF19L1Q69YN2 538 aaKnown RBP18.48■□□□□ 0.55
CPNE1-208ENST00000414711 CCDC105Q8IYK2 499 aa18.48■□□□□ 0.55
CPNE1-208ENST00000414711 KBTBD3Q8NAB2 608 aa18.48■□□□□ 0.55
CPNE1-208ENST00000414711 MICAL1Q8TDZ2 1067 aa18.48■□□□□ 0.55
CPNE1-208ENST00000414711 APOL5Q9BWW9 433 aa18.48■□□□□ 0.55
CPNE1-208ENST00000414711 RNPEPQ9H4A4 650 aa18.48■□□□□ 0.55
CPNE1-208ENST00000414711 TTC3P53804 2025 aa18.48■□□□□ 0.55
CPNE1-208ENST00000414711 CHD8Q9HCK8 2581 aa18.47■□□□□ 0.55
CPNE1-208ENST00000414711 MAP1BP46821 2468 aaKnown RBP18.47■□□□□ 0.55
CPNE1-208ENST00000414711 H3BRB1 525 aa18.47■□□□□ 0.55
CPNE1-208ENST00000414711 ENPP3O14638 875 aa18.47■□□□□ 0.55
CPNE1-208ENST00000414711 RNF113AO15541 343 aaKnown RBP18.47■□□□□ 0.55
CPNE1-208ENST00000414711 RAB11FIP3O75154 756 aa18.47■□□□□ 0.55
CPNE1-208ENST00000414711 CELF3Q5SZQ8 465 aaKnown RBP18.47■□□□□ 0.55
CPNE1-208ENST00000414711 ARHGEF16Q5VV41 709 aa18.47■□□□□ 0.55
CPNE1-208ENST00000414711 ANKRD54Q6NXT1 300 aa18.47■□□□□ 0.55
CPNE1-208ENST00000414711 FLCNQ8NFG4 579 aa18.47■□□□□ 0.55
CPNE1-208ENST00000414711 TBC1D5Q92609 795 aa18.47■□□□□ 0.55
CPNE1-208ENST00000414711 SEMA4AQ9H3S1 761 aa18.47■□□□□ 0.55
CPNE1-208ENST00000414711 TUT1Q9H6E5 874 aaKnown RBP18.47■□□□□ 0.55
CPNE1-208ENST00000414711 PLXNA4Q9HCM2 1894 aa18.47■□□□□ 0.55
CPNE1-208ENST00000414711 SPTBN2O15020 2390 aa18.47■□□□□ 0.55
CPNE1-208ENST00000414711 MYH7BA7E2Y1 1941 aa18.47■□□□□ 0.55
CPNE1-208ENST00000414711 C2CD4DB7Z1M9 353 aa18.46■□□□□ 0.55
CPNE1-208ENST00000414711 RANBP6O60518 1105 aaKnown RBP18.46■□□□□ 0.55
CPNE1-208ENST00000414711 GGPS1O95749 300 aa18.46■□□□□ 0.55
CPNE1-208ENST00000414711 CHRNA1P02708 482 aa18.46■□□□□ 0.55
CPNE1-208ENST00000414711 PDHBP11177 359 aa18.46■□□□□ 0.55
CPNE1-208ENST00000414711 TECP42680 631 aa18.46■□□□□ 0.55
CPNE1-208ENST00000414711 ST3GAL2Q16842 350 aa18.46■□□□□ 0.55
CPNE1-208ENST00000414711 PAN2Q504Q3 1202 aaKnown RBP18.46■□□□□ 0.55
CPNE1-208ENST00000414711 HINFPQ9BQA5 517 aa18.46■□□□□ 0.55
CPNE1-208ENST00000414711 MAF1Q9H063 256 aa18.46■□□□□ 0.55
CPNE1-208ENST00000414711 EHMT1Q9H9B1 1298 aa18.46■□□□□ 0.55
CPNE1-208ENST00000414711 CCDC171Q6TFL3 1326 aa18.46■□□□□ 0.55
CPNE1-208ENST00000414711 OTOGLQ3ZCN5 2332 aa18.45■□□□□ 0.54
CPNE1-208ENST00000414711 PPFIA3O75145 1194 aa18.45■□□□□ 0.54
CPNE1-208ENST00000414711 LGALS2P05162 132 aa18.45■□□□□ 0.54
CPNE1-208ENST00000414711 NR3C2P08235 984 aa18.45■□□□□ 0.54
CPNE1-208ENST00000414711 TOP1P11387 765 aaKnown RBP18.45■□□□□ 0.54
CPNE1-208ENST00000414711 GNAT1P11488 350 aa18.45■□□□□ 0.54
CPNE1-208ENST00000414711 LPIN1Q14693 890 aa18.45■□□□□ 0.54
CPNE1-208ENST00000414711 SYCE2Q6PIF2 218 aa18.45■□□□□ 0.54
CPNE1-208ENST00000414711 TMEM184AQ6ZMB5 413 aa18.45■□□□□ 0.54
CPNE1-208ENST00000414711 TMEM47Q9BQJ4 181 aa18.45■□□□□ 0.54
CPNE1-208ENST00000414711 SETD4Q9NVD3 440 aa18.45■□□□□ 0.54
CPNE1-208ENST00000414711 ASGR2P07307 311 aa18.44■□□□□ 0.54
CPNE1-208ENST00000414711 ZFYP08048 801 aaPredicted RBP18.44■□□□□ 0.54
CPNE1-208ENST00000414711 AOC1P19801 751 aa18.44■□□□□ 0.54
CPNE1-208ENST00000414711 UBA1P22314 1058 aaKnown RBP18.44■□□□□ 0.54
CPNE1-208ENST00000414711 UBE3AQ05086 875 aa18.44■□□□□ 0.54
CPNE1-208ENST00000414711 CTDSPL2Q05D32 466 aa18.44■□□□□ 0.54
CPNE1-208ENST00000414711 ZNF543Q08ER8 600 aa18.44■□□□□ 0.54
CPNE1-208ENST00000414711 CYP2W1Q8TAV3 490 aa18.44■□□□□ 0.54
CPNE1-208ENST00000414711 PXMP2Q9NR77 195 aa18.44■□□□□ 0.54
CPNE1-208ENST00000414711 CDH22Q9UJ99 828 aa18.44■□□□□ 0.54
CPNE1-208ENST00000414711 ABCB11O95342 1321 aa18.44■□□□□ 0.54
CPNE1-208ENST00000414711 ATRXP46100 2492 aa18.43■□□□□ 0.54
CPNE1-208ENST00000414711 HMMRO75330 724 aa18.43■□□□□ 0.54
CPNE1-208ENST00000414711 KCNC3Q14003 757 aa18.43■□□□□ 0.54
CPNE1-208ENST00000414711 KCNV1Q6PIU1 500 aa18.43■□□□□ 0.54
CPNE1-208ENST00000414711 MCF2L2Q86YR7 1114 aa18.43■□□□□ 0.54
CPNE1-208ENST00000414711 NPAS4Q8IUM7 802 aa18.43■□□□□ 0.54
CPNE1-208ENST00000414711 DTWD2Q8NBA8 298 aa18.43■□□□□ 0.54
CPNE1-208ENST00000414711 LMBR1Q8WVP7 490 aa18.43■□□□□ 0.54
CPNE1-208ENST00000414711 LINC01599Q8WXQ3 324 aa18.43■□□□□ 0.54
CPNE1-208ENST00000414711 FRYLO94915 3013 aa18.42■□□□□ 0.54
CPNE1-208ENST00000414711 USP24Q9UPU5 2620 aa18.42■□□□□ 0.54
CPNE1-208ENST00000414711 MYO10Q9HD67 2058 aa18.42■□□□□ 0.54
CPNE1-208ENST00000414711 PI15O43692 258 aa18.42■□□□□ 0.54
CPNE1-208ENST00000414711 HOXB8P17481 243 aaPredicted RBP18.42■□□□□ 0.54
CPNE1-208ENST00000414711 ARHGAP4P98171 946 aa18.42■□□□□ 0.54
CPNE1-208ENST00000414711 LLGL2Q6P1M3 1020 aa18.42■□□□□ 0.54
CPNE1-208ENST00000414711 CRIPAKQ8N1N5 446 aa18.42■□□□□ 0.54
CPNE1-208ENST00000414711 POMKQ9H5K3 350 aa18.42■□□□□ 0.54
CPNE1-208ENST00000414711 MLXIPQ9HAP2 919 aa18.42■□□□□ 0.54
CPNE1-208ENST00000414711 SP2Q02086 613 aa18.41■□□□□ 0.54
CPNE1-208ENST00000414711 MGAT3Q09327 533 aa18.41■□□□□ 0.54
CPNE1-208ENST00000414711 CDC37Q16543 378 aaPredicted RBP18.41■□□□□ 0.54
CPNE1-208ENST00000414711 RSPO4Q2I0M5 234 aaPredicted RBP18.41■□□□□ 0.54
CPNE1-208ENST00000414711 NECTIN4Q96NY8 510 aa18.41■□□□□ 0.54
CPNE1-208ENST00000414711 SUPT16HQ9Y5B9 1047 aaKnown RBP18.41■□□□□ 0.54
CPNE1-208ENST00000414711 R4GN57 208 aa18.41■□□□□ 0.54
CPNE1-208ENST00000414711 FSCN2O14926 492 aa18.4■□□□□ 0.54
CPNE1-208ENST00000414711 ARP10275 920 aa18.4■□□□□ 0.54
CPNE1-208ENST00000414711 ERVFC1P60507 584 aa18.4■□□□□ 0.54
CPNE1-208ENST00000414711 ADAM17P78536 824 aa18.4■□□□□ 0.54
CPNE1-208ENST00000414711 PDE12Q6L8Q7 609 aaKnown RBP18.4■□□□□ 0.54
CPNE1-208ENST00000414711 TSHZ1Q6ZSZ6 1077 aa18.4■□□□□ 0.54
CPNE1-208ENST00000414711 TDRD5Q8NAT2 981 aaKnown RBP18.4■□□□□ 0.54
CPNE1-208ENST00000414711 RASGRP4Q8TDF6 673 aa18.4■□□□□ 0.54
CPNE1-208ENST00000414711 RUBCNQ92622 972 aa18.4■□□□□ 0.54
CPNE1-208ENST00000414711 SEC62Q99442 399 aaKnown RBP18.4■□□□□ 0.54
CPNE1-208ENST00000414711 RTP3Q9BQQ7 232 aa18.4■□□□□ 0.54
CPNE1-208ENST00000414711 ECHDC1Q9NTX5 307 aa18.4■□□□□ 0.54
CPNE1-208ENST00000414711 PCDHB12Q9Y5F1 795 aa18.4■□□□□ 0.54
CPNE1-208ENST00000414711 NOP56O00567 594 aaKnown RBP18.39■□□□□ 0.53
CPNE1-208ENST00000414711 ORC4O43929 436 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms