RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 Q4G0T1 1027 aa16.67■□□□□ 0.26
CHD1-202ENST00000414220 HABP4Q5JVS0 413 aaKnown RBP16.67■□□□□ 0.26
CHD1-202ENST00000414220 FAM160B1Q5W0V3 765 aa16.67■□□□□ 0.26
CHD1-202ENST00000414220 MIS18BP1Q6P0N0 1132 aa16.67■□□□□ 0.26
CHD1-202ENST00000414220 NEK8Q86SG6 692 aa16.67■□□□□ 0.26
CHD1-202ENST00000414220 RPUSD2Q8IZ73 545 aaKnown RBP16.67■□□□□ 0.26
CHD1-202ENST00000414220 TDHQ8IZJ6 230 aa16.67■□□□□ 0.26
CHD1-202ENST00000414220 CAGE1Q8TC20 777 aa16.67■□□□□ 0.26
CHD1-202ENST00000414220 BCAS3Q9H6U6 928 aa16.67■□□□□ 0.26
CHD1-202ENST00000414220 HDAC6Q9UBN7 1215 aa16.67■□□□□ 0.26
CHD1-202ENST00000414220 GSTTP1A0A1W2PQM5 241 aa16.66■□□□□ 0.26
CHD1-202ENST00000414220 DDX39AO00148 427 aaKnown RBP16.66■□□□□ 0.26
CHD1-202ENST00000414220 BACH1O14867 736 aa16.66■□□□□ 0.26
CHD1-202ENST00000414220 MMP1P03956 469 aa16.66■□□□□ 0.26
CHD1-202ENST00000414220 SLC26A2P50443 739 aa16.66■□□□□ 0.26
CHD1-202ENST00000414220 ACTR2P61160 394 aa16.66■□□□□ 0.26
CHD1-202ENST00000414220 INF2Q27J81 1249 aa16.66■□□□□ 0.26
CHD1-202ENST00000414220 LETM2Q2VYF4 491 aa16.66■□□□□ 0.26
CHD1-202ENST00000414220 KRT40Q6A162 431 aa16.66■□□□□ 0.26
CHD1-202ENST00000414220 PIK3AP1Q6ZUJ8 805 aa16.66■□□□□ 0.26
CHD1-202ENST00000414220 SMAP1Q8IYB5 467 aaPredicted RBP16.66■□□□□ 0.26
CHD1-202ENST00000414220 RIT2Q99578 217 aa16.66■□□□□ 0.26
CHD1-202ENST00000414220 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.66■□□□□ 0.26
CHD1-202ENST00000414220 CYP3A7-CYP3A51PA0A087WV96 503 aa16.65■□□□□ 0.26
CHD1-202ENST00000414220 ADAMTS3O15072 1205 aa16.65■□□□□ 0.26
CHD1-202ENST00000414220 PARNO95453 639 aaKnown RBP16.65■□□□□ 0.26
CHD1-202ENST00000414220 SMIM10L2AP0DMW4 78 aa16.65■□□□□ 0.26
CHD1-202ENST00000414220 SMIM10L2BP0DMW5 78 aa16.65■□□□□ 0.26
CHD1-202ENST00000414220 CYP2C9P11712 490 aa16.65■□□□□ 0.26
CHD1-202ENST00000414220 CYP3A7P24462 503 aa16.65■□□□□ 0.26
CHD1-202ENST00000414220 STAT5BP51692 787 aa16.65■□□□□ 0.26
CHD1-202ENST00000414220 PTK7Q13308 1070 aa16.65■□□□□ 0.26
CHD1-202ENST00000414220 ITGB3BPQ13352 177 aaPredicted RBP16.65■□□□□ 0.26
CHD1-202ENST00000414220 NPY5RQ15761 445 aa16.65■□□□□ 0.26
CHD1-202ENST00000414220 GDF6Q6KF10 455 aaPredicted RBP16.65■□□□□ 0.26
CHD1-202ENST00000414220 ZNF746Q6NUN9 644 aaPredicted RBP16.65■□□□□ 0.26
CHD1-202ENST00000414220 PLPPR4Q7Z2D5 763 aa16.65■□□□□ 0.26
CHD1-202ENST00000414220 DIS3L2Q8IYB7 885 aaKnown RBP16.65■□□□□ 0.26
CHD1-202ENST00000414220 ATP6V0A1Q93050 837 aa16.65■□□□□ 0.26
CHD1-202ENST00000414220 TMX3Q96JJ7 454 aa16.65■□□□□ 0.26
CHD1-202ENST00000414220 NOC4LQ9BVI4 516 aaKnown RBP16.65■□□□□ 0.26
CHD1-202ENST00000414220 TEKT3Q9BXF9 490 aa16.65■□□□□ 0.26
CHD1-202ENST00000414220 PRO3102Q9H379 93 aa16.65■□□□□ 0.26
CHD1-202ENST00000414220 DDX25Q9UHL0 483 aaKnown RBP16.65■□□□□ 0.26
CHD1-202ENST00000414220 SAMM50Q9Y512 469 aa16.65■□□□□ 0.26
CHD1-202ENST00000414220 EMSYQ7Z589 1322 aa16.65■□□□□ 0.26
CHD1-202ENST00000414220 NRCAMQ92823 1304 aa16.65■□□□□ 0.26
CHD1-202ENST00000414220 PITPNM1O00562 1244 aa16.64■□□□□ 0.25
CHD1-202ENST00000414220 CCNT1O60563 726 aaKnown RBP16.64■□□□□ 0.25
CHD1-202ENST00000414220 GAS7O60861 476 aa16.64■□□□□ 0.25
CHD1-202ENST00000414220 BAG4O95429 457 aaKnown RBP16.64■□□□□ 0.25
CHD1-202ENST00000414220 PSAPP07602 524 aa16.64■□□□□ 0.25
CHD1-202ENST00000414220 CYP2C18P33260 490 aa16.64■□□□□ 0.25
CHD1-202ENST00000414220 RFC2P35250 354 aa16.64■□□□□ 0.25
CHD1-202ENST00000414220 FOSBP53539 338 aa16.64■□□□□ 0.25
CHD1-202ENST00000414220 LRCH2Q5VUJ6 765 aa16.64■□□□□ 0.25
CHD1-202ENST00000414220 PPP4R3AQ6IN85 833 aa16.64■□□□□ 0.25
CHD1-202ENST00000414220 AFAP1L1Q8TED9 768 aa16.64■□□□□ 0.25
CHD1-202ENST00000414220 MTIF3Q9H2K0 278 aaKnown RBP16.64■□□□□ 0.25
CHD1-202ENST00000414220 GJB4Q9NTQ9 266 aa16.64■□□□□ 0.25
CHD1-202ENST00000414220 PCDHA10Q9Y5I2 948 aa16.64■□□□□ 0.25
CHD1-202ENST00000414220 MYH7BA7E2Y1 1941 aa16.64■□□□□ 0.25
CHD1-202ENST00000414220 SCN10AQ9Y5Y9 1956 aa16.64■□□□□ 0.25
CHD1-202ENST00000414220 RRN3P2A6NIE6 340 aa16.63■□□□□ 0.25
CHD1-202ENST00000414220 WDR64B1ANS9 1081 aa16.63■□□□□ 0.25
CHD1-202ENST00000414220 MSH4O15457 936 aa16.63■□□□□ 0.25
CHD1-202ENST00000414220 DTNBO60941 627 aa16.63■□□□□ 0.25
CHD1-202ENST00000414220 LGR5O75473 907 aa16.63■□□□□ 0.25
CHD1-202ENST00000414220 ATG7O95352 703 aa16.63■□□□□ 0.25
CHD1-202ENST00000414220 RPLP2P05387 115 aaKnown RBP16.63■□□□□ 0.25
CHD1-202ENST00000414220 PFKMP08237 780 aa16.63■□□□□ 0.25
CHD1-202ENST00000414220 ITGB8P26012 769 aa16.63■□□□□ 0.25
CHD1-202ENST00000414220 SFNP31947 248 aa16.63■□□□□ 0.25
CHD1-202ENST00000414220 CCL23P55773 120 aa16.63■□□□□ 0.25
CHD1-202ENST00000414220 ST3GAL1Q11201 340 aa16.63■□□□□ 0.25
CHD1-202ENST00000414220 PSRC1Q6PGN9 363 aaPredicted RBP16.63■□□□□ 0.25
CHD1-202ENST00000414220 OXER1Q8TDS5 423 aa16.63■□□□□ 0.25
CHD1-202ENST00000414220 PPP1R13LQ8WUF5 828 aa16.63■□□□□ 0.25
CHD1-202ENST00000414220 FAM20AQ96MK3 541 aa16.63■□□□□ 0.25
CHD1-202ENST00000414220 RNPEPQ9H4A4 650 aa16.63■□□□□ 0.25
CHD1-202ENST00000414220 ZNF302Q9NR11 478 aa16.63■□□□□ 0.25
CHD1-202ENST00000414220 TRPC6Q9Y210 931 aa16.63■□□□□ 0.25
CHD1-202ENST00000414220 BTBD18B2RXH4 712 aa16.62■□□□□ 0.25
CHD1-202ENST00000414220 DHX15O43143 795 aaKnown RBP16.62■□□□□ 0.25
CHD1-202ENST00000414220 TDP2O95551 362 aa16.62■□□□□ 0.25
CHD1-202ENST00000414220 MARK3P27448 753 aa16.62■□□□□ 0.25
CHD1-202ENST00000414220 JAK3P52333 1124 aa16.62■□□□□ 0.25
CHD1-202ENST00000414220 PPFIA1Q13136 1202 aa16.62■□□□□ 0.25
CHD1-202ENST00000414220 NR5A1Q13285 461 aa16.62■□□□□ 0.25
CHD1-202ENST00000414220 ABHD15Q6UXT9 468 aa16.62■□□□□ 0.25
CHD1-202ENST00000414220 RSPH3Q86UC2 560 aa16.62■□□□□ 0.25
CHD1-202ENST00000414220 TRIM50Q86XT4 487 aa16.62■□□□□ 0.25
CHD1-202ENST00000414220 CKAP2LQ8IYA6 745 aa16.62■□□□□ 0.25
CHD1-202ENST00000414220 FBXO18Q8NFZ0 1043 aa16.62■□□□□ 0.25
CHD1-202ENST00000414220 SLC5A5Q92911 643 aa16.62■□□□□ 0.25
CHD1-202ENST00000414220 FOXP1Q9H334 677 aaPredicted RBP16.62■□□□□ 0.25
CHD1-202ENST00000414220 IL23AQ9NPF7 189 aa16.62■□□□□ 0.25
CHD1-202ENST00000414220 SMC3Q9UQE7 1217 aa16.62■□□□□ 0.25
CHD1-202ENST00000414220 TBX3O15119 743 aa16.61■□□□□ 0.25
CHD1-202ENST00000414220 FGBP02675 491 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms