RNA–Protein interactions for RNA: ENST00000414017.5

HLA-DMB-257, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-257ENST00000414017 NECAB2Q7Z6G3 386 aa11.78□□□□□ -0.52
HLA-DMB-257ENST00000414017 TRIM50Q86XT4 487 aa11.78□□□□□ -0.52
HLA-DMB-257ENST00000414017 SLFN12Q8IYM2 578 aa11.78□□□□□ -0.52
HLA-DMB-257ENST00000414017 ANKLE1Q8NAG6 615 aa11.78□□□□□ -0.52
HLA-DMB-257ENST00000414017 SEPT1Q8WYJ6 367 aa11.78□□□□□ -0.52
HLA-DMB-257ENST00000414017 HAS1Q92839 578 aa11.78□□□□□ -0.52
HLA-DMB-257ENST00000414017 GLG1Q92896 1179 aa11.78□□□□□ -0.52
HLA-DMB-257ENST00000414017 EMID1Q96A84 441 aaPredicted RBP11.78□□□□□ -0.52
HLA-DMB-257ENST00000414017 GLT1D1Q96MS3 346 aa11.78□□□□□ -0.52
HLA-DMB-257ENST00000414017 GPR20Q99678 358 aa11.78□□□□□ -0.52
HLA-DMB-257ENST00000414017 FTOQ9C0B1 505 aaKnown RBP eCLIP11.78□□□□□ -0.52
HLA-DMB-257ENST00000414017 C11orf49Q9H6J7 331 aa11.78□□□□□ -0.52
HLA-DMB-257ENST00000414017 KCNMB3Q9NPA1 279 aa11.78□□□□□ -0.52
HLA-DMB-257ENST00000414017 STARD7Q9NQZ5 370 aa11.78□□□□□ -0.52
HLA-DMB-257ENST00000414017 ELP1O95163 1332 aa11.78□□□□□ -0.52
HLA-DMB-257ENST00000414017 A0A1W2PQ45 241 aaPredicted RBP11.77□□□□□ -0.53
HLA-DMB-257ENST00000414017 GSTTP1A0A1W2PQM5 241 aa11.77□□□□□ -0.53
HLA-DMB-257ENST00000414017 A0A1W2PQY0 241 aa11.77□□□□□ -0.53
HLA-DMB-257ENST00000414017 MOXD2PA6NHM9 499 aa11.77□□□□□ -0.53
HLA-DMB-257ENST00000414017 DHX15O43143 795 aaKnown RBP11.77□□□□□ -0.53
HLA-DMB-257ENST00000414017 PSMD10O75832 226 aa11.77□□□□□ -0.53
HLA-DMB-257ENST00000414017 CCNE2O96020 404 aa11.77□□□□□ -0.53
HLA-DMB-257ENST00000414017 LGALS2P05162 132 aa11.77□□□□□ -0.53
HLA-DMB-257ENST00000414017 PDIA4P13667 645 aaKnown RBP11.77□□□□□ -0.53
HLA-DMB-257ENST00000414017 NCLP19338 710 aaKnown RBP11.77□□□□□ -0.53
HLA-DMB-257ENST00000414017 CST5P28325 142 aaPredicted RBP11.77□□□□□ -0.53
HLA-DMB-257ENST00000414017 TECP42680 631 aa11.77□□□□□ -0.53
HLA-DMB-257ENST00000414017 KRT76Q01546 638 aa11.77□□□□□ -0.53
HLA-DMB-257ENST00000414017 SF3A1Q15459 793 aaKnown RBP11.77□□□□□ -0.53
HLA-DMB-257ENST00000414017 FAM20AQ96MK3 541 aa11.77□□□□□ -0.53
HLA-DMB-257ENST00000414017 RIT2Q99578 217 aa11.77□□□□□ -0.53
HLA-DMB-257ENST00000414017 TSEN34Q9BSV6 310 aaKnown RBP11.77□□□□□ -0.53
HLA-DMB-257ENST00000414017 MTG1Q9BT17 334 aaPredicted RBP11.77□□□□□ -0.53
HLA-DMB-257ENST00000414017 AZI2Q9H6S1 392 aa11.77□□□□□ -0.53
HLA-DMB-257ENST00000414017 TTC12Q9H892 705 aaPredicted RBP11.77□□□□□ -0.53
HLA-DMB-257ENST00000414017 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.77□□□□□ -0.53
HLA-DMB-257ENST00000414017 DISC1Q9NRI5 854 aa11.77□□□□□ -0.53
HLA-DMB-257ENST00000414017 TFIP11Q9UBB9 837 aaKnown RBP11.77□□□□□ -0.53
HLA-DMB-257ENST00000414017 PCDHA12Q9UN75 941 aa11.77□□□□□ -0.53
HLA-DMB-257ENST00000414017 PHF24Q9UPV7 400 aa11.77□□□□□ -0.53
HLA-DMB-257ENST00000414017 CLIC4Q9Y696 253 aa11.77□□□□□ -0.53
HLA-DMB-257ENST00000414017 WDR64B1ANS9 1081 aa11.76□□□□□ -0.53
HLA-DMB-257ENST00000414017 TBX3O15119 743 aa11.76□□□□□ -0.53
HLA-DMB-257ENST00000414017 KPNA6O60684 536 aa11.76□□□□□ -0.53
HLA-DMB-257ENST00000414017 PPFIA4O75335 1185 aa11.76□□□□□ -0.53
HLA-DMB-257ENST00000414017 BRD1O95696 1058 aa11.76□□□□□ -0.53
HLA-DMB-257ENST00000414017 PSAPP07602 524 aa11.76□□□□□ -0.53
HLA-DMB-257ENST00000414017 PSEN2P49810 448 aa11.76□□□□□ -0.53
HLA-DMB-257ENST00000414017 MNX1P50219 401 aaPredicted RBP11.76□□□□□ -0.53
HLA-DMB-257ENST00000414017 PURAQ00577 322 aaKnown RBP11.76□□□□□ -0.53
HLA-DMB-257ENST00000414017 ORC2Q13416 577 aaPredicted RBP11.76□□□□□ -0.53
HLA-DMB-257ENST00000414017 TMEM266Q2M3C6 531 aa11.76□□□□□ -0.53
HLA-DMB-257ENST00000414017 FAM160B1Q5W0V3 765 aa11.76□□□□□ -0.53
HLA-DMB-257ENST00000414017 CCSAPQ6IQ19 270 aaPredicted RBP11.76□□□□□ -0.53
HLA-DMB-257ENST00000414017 ZNF746Q6NUN9 644 aaPredicted RBP11.76□□□□□ -0.53
HLA-DMB-257ENST00000414017 SWSAP1Q6NVH7 229 aa11.76□□□□□ -0.53
HLA-DMB-257ENST00000414017 CKAP2LQ8IYA6 745 aa11.76□□□□□ -0.53
HLA-DMB-257ENST00000414017 ZNF396Q96N95 335 aaPredicted RBP11.76□□□□□ -0.53
HLA-DMB-257ENST00000414017 ZNF302Q9NR11 478 aa11.76□□□□□ -0.53
HLA-DMB-257ENST00000414017 GABBR1Q9UBS5 961 aa11.76□□□□□ -0.53
HLA-DMB-257ENST00000414017 CEP131Q9UPN4 1083 aa11.76□□□□□ -0.53
HLA-DMB-257ENST00000414017 POTEMA6NI47 508 aa11.75□□□□□ -0.53
HLA-DMB-257ENST00000414017 EML1O00423 815 aa11.75□□□□□ -0.53
HLA-DMB-257ENST00000414017 SUPT20HL2P0C7V6 817 aa11.75□□□□□ -0.53
HLA-DMB-257ENST00000414017 MARCKSP29966 332 aaPredicted RBP11.75□□□□□ -0.53
HLA-DMB-257ENST00000414017 JAK3P52333 1124 aa11.75□□□□□ -0.53
HLA-DMB-257ENST00000414017 NUCB2P80303 420 aa11.75□□□□□ -0.53
HLA-DMB-257ENST00000414017 ITGA7Q13683 1181 aa11.75□□□□□ -0.53
HLA-DMB-257ENST00000414017 MFSD10Q14728 455 aa11.75□□□□□ -0.53
HLA-DMB-257ENST00000414017 STK38Q15208 465 aa11.75□□□□□ -0.53
HLA-DMB-257ENST00000414017 KIAA0753Q2KHM9 967 aa11.75□□□□□ -0.53
HLA-DMB-257ENST00000414017 NBPF20Q3BBV1 942 aa11.75□□□□□ -0.53
HLA-DMB-257ENST00000414017 TPRNQ4KMQ1 711 aa11.75□□□□□ -0.53
HLA-DMB-257ENST00000414017 PDXDC2PQ6P474 469 aa11.75□□□□□ -0.53
HLA-DMB-257ENST00000414017 ABHD15Q6UXT9 468 aa11.75□□□□□ -0.53
HLA-DMB-257ENST00000414017 SMAP1Q8IYB5 467 aaPredicted RBP11.75□□□□□ -0.53
HLA-DMB-257ENST00000414017 BANK1Q8NDB2 785 aa11.75□□□□□ -0.53
HLA-DMB-257ENST00000414017 CHAMP1Q96JM3 812 aa11.75□□□□□ -0.53
HLA-DMB-257ENST00000414017 IPO9Q96P70 1041 aaKnown RBP11.75□□□□□ -0.53
HLA-DMB-257ENST00000414017 MTMR9Q96QG7 549 aa11.75□□□□□ -0.53
HLA-DMB-257ENST00000414017 USP28Q96RU2 1077 aa11.75□□□□□ -0.53
HLA-DMB-257ENST00000414017 VAV3Q9UKW4 847 aa11.75□□□□□ -0.53
HLA-DMB-257ENST00000414017 ZNF215Q9UL58 517 aaPredicted RBP11.75□□□□□ -0.53
HLA-DMB-257ENST00000414017 TRPC6Q9Y210 931 aa11.75□□□□□ -0.53
HLA-DMB-257ENST00000414017 ATP11BQ9Y2G3 1177 aa11.75□□□□□ -0.53
HLA-DMB-257ENST00000414017 ZDHHC9Q9Y397 364 aa11.75□□□□□ -0.53
HLA-DMB-257ENST00000414017 PCDHA10Q9Y5I2 948 aa11.75□□□□□ -0.53
HLA-DMB-257ENST00000414017 A0A0U1RQG5 324 aaPredicted RBP11.74□□□□□ -0.53
HLA-DMB-257ENST00000414017 VWA3AA6NCI4 1184 aa11.74□□□□□ -0.53
HLA-DMB-257ENST00000414017 H3BRB1 525 aa11.74□□□□□ -0.53
HLA-DMB-257ENST00000414017 PQBP1O60828 265 aaKnown RBP11.74□□□□□ -0.53
HLA-DMB-257ENST00000414017 CABYRO75952 493 aa11.74□□□□□ -0.53
HLA-DMB-257ENST00000414017 CAPN2P17655 700 aa11.74□□□□□ -0.53
HLA-DMB-257ENST00000414017 SFNP31947 248 aa11.74□□□□□ -0.53
HLA-DMB-257ENST00000414017 STAT5BP51692 787 aa11.74□□□□□ -0.53
HLA-DMB-257ENST00000414017 IGBP1P78318 339 aa11.74□□□□□ -0.53
HLA-DMB-257ENST00000414017 NKX3-2P78367 333 aa11.74□□□□□ -0.53
HLA-DMB-257ENST00000414017 CYP4A11Q02928 519 aa11.74□□□□□ -0.53
HLA-DMB-257ENST00000414017 DNM1Q05193 864 aaKnown RBP11.74□□□□□ -0.53
HLA-DMB-257ENST00000414017 ZRSR1Q15695 479 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms