RNA–Protein interactions for RNA: ENST00000413465.6

TP53-203, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 1,018 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-203ENST00000413465 PSEN2P49810 448 aa12.55□□□□□ -0.4
TP53-203ENST00000413465 CHMP4BP1P59074 171 aa12.55□□□□□ -0.4
TP53-203ENST00000413465 BFSP2Q13515 415 aa12.55□□□□□ -0.4
TP53-203ENST00000413465 KIAA0753Q2KHM9 967 aa12.55□□□□□ -0.4
TP53-203ENST00000413465 PSRC1Q6PGN9 363 aaPredicted RBP12.55□□□□□ -0.4
TP53-203ENST00000413465 CYFIP1Q7L576 1253 aa12.55□□□□□ -0.4
TP53-203ENST00000413465 NIPA1Q7RTP0 329 aa12.55□□□□□ -0.4
TP53-203ENST00000413465 MXRA8Q9BRK3 442 aa12.55□□□□□ -0.4
TP53-203ENST00000413465 PPP1R12CQ9BZL4 782 aa12.55□□□□□ -0.4
TP53-203ENST00000413465 TRMT13Q9NUP7 481 aaKnown RBP12.55□□□□□ -0.4
TP53-203ENST00000413465 ZNF215Q9UL58 517 aaPredicted RBP12.55□□□□□ -0.4
TP53-203ENST00000413465 STK36Q9NRP7 1315 aa12.55□□□□□ -0.4
TP53-203ENST00000413465 TRIP12Q14669 1992 aaPredicted RBP12.54□□□□□ -0.4
TP53-203ENST00000413465 HAS3O00219 553 aa12.54□□□□□ -0.4
TP53-203ENST00000413465 PFKFB2O60825 505 aa12.54□□□□□ -0.4
TP53-203ENST00000413465 LGALS2P05162 132 aa12.54□□□□□ -0.4
TP53-203ENST00000413465 PFKMP08237 780 aa12.54□□□□□ -0.4
TP53-203ENST00000413465 KCNA2P16389 499 aa12.54□□□□□ -0.4
TP53-203ENST00000413465 RFC2P35250 354 aa12.54□□□□□ -0.4
TP53-203ENST00000413465 ARHGAP4P98171 946 aa12.54□□□□□ -0.4
TP53-203ENST00000413465 STK3Q13188 491 aa12.54□□□□□ -0.4
TP53-203ENST00000413465 PTGISQ16647 500 aa12.54□□□□□ -0.4
TP53-203ENST00000413465 CEP55Q53EZ4 464 aa12.54□□□□□ -0.4
TP53-203ENST00000413465 GALNT17Q6IS24 598 aa12.54□□□□□ -0.4
TP53-203ENST00000413465 CAGE1Q8TC20 777 aa12.54□□□□□ -0.4
TP53-203ENST00000413465 RNPC3Q96LT9 517 aaKnown RBP12.54□□□□□ -0.4
TP53-203ENST00000413465 GPR20Q99678 358 aa12.54□□□□□ -0.4
TP53-203ENST00000413465 SDF4Q9BRK5 362 aa12.54□□□□□ -0.4
TP53-203ENST00000413465 C22orf23Q9BZE7 217 aa12.54□□□□□ -0.4
TP53-203ENST00000413465 MTIF3Q9H2K0 278 aaKnown RBP12.54□□□□□ -0.4
TP53-203ENST00000413465 GTF2IRD1Q9UHL9 959 aa12.54□□□□□ -0.4
TP53-203ENST00000413465 H3BRB1 525 aa12.53□□□□□ -0.4
TP53-203ENST00000413465 SORBS3O60504 671 aa12.53□□□□□ -0.4
TP53-203ENST00000413465 CYP3A4P08684 503 aa12.53□□□□□ -0.4
TP53-203ENST00000413465 CSF2RAP15509 400 aa12.53□□□□□ -0.4
TP53-203ENST00000413465 XBP1P17861 261 aa12.53□□□□□ -0.4
TP53-203ENST00000413465 CYP2C18P33260 490 aa12.53□□□□□ -0.4
TP53-203ENST00000413465 ZNF76P36508 570 aa12.53□□□□□ -0.4
TP53-203ENST00000413465 NEK4P51957 841 aa12.53□□□□□ -0.4
TP53-203ENST00000413465 AK2P54819 239 aa12.53□□□□□ -0.4
TP53-203ENST00000413465 SETQ01105 290 aaPredicted RBP12.53□□□□□ -0.4
TP53-203ENST00000413465 SHHQ15465 462 aa12.53□□□□□ -0.4
TP53-203ENST00000413465 IER5LQ5T953 404 aa12.53□□□□□ -0.4
TP53-203ENST00000413465 JAKMIP3Q5VZ66 844 aa12.53□□□□□ -0.4
TP53-203ENST00000413465 RPUSD2Q8IZ73 545 aaKnown RBP12.53□□□□□ -0.4
TP53-203ENST00000413465 RETREG2Q8NC44 543 aa12.53□□□□□ -0.4
TP53-203ENST00000413465 WASF1Q92558 559 aa12.53□□□□□ -0.4
TP53-203ENST00000413465 PGBD1Q96JS3 809 aa12.53□□□□□ -0.4
TP53-203ENST00000413465 C16orf70Q9BSU1 422 aa12.53□□□□□ -0.4
TP53-203ENST00000413465 ALG1Q9BT22 464 aa12.53□□□□□ -0.4
TP53-203ENST00000413465 TUT1Q9H6E5 874 aaKnown RBP12.53□□□□□ -0.4
TP53-203ENST00000413465 JPH1Q9HDC5 661 aaPredicted RBP12.53□□□□□ -0.4
TP53-203ENST00000413465 IL23AQ9NPF7 189 aa12.53□□□□□ -0.4
TP53-203ENST00000413465 KCNH7Q9NS40 1196 aa12.53□□□□□ -0.4
TP53-203ENST00000413465 TMEM260Q9NX78 707 aa12.53□□□□□ -0.4
TP53-203ENST00000413465 VPS54Q9P1Q0 977 aa12.53□□□□□ -0.4
TP53-203ENST00000413465 PCDH10Q9P2E7 1040 aa12.53□□□□□ -0.4
TP53-203ENST00000413465 TPCN1Q9ULQ1 816 aa12.53□□□□□ -0.4
TP53-203ENST00000413465 NFASCO94856 1347 aa12.53□□□□□ -0.4
TP53-203ENST00000413465 MEIS1O00470 390 aa12.52□□□□□ -0.41
TP53-203ENST00000413465 PARNO95453 639 aaKnown RBP12.52□□□□□ -0.41
TP53-203ENST00000413465 GNAT1P11488 350 aa12.52□□□□□ -0.41
TP53-203ENST00000413465 CYP2C9P11712 490 aa12.52□□□□□ -0.41
TP53-203ENST00000413465 NLRP5P59047 1200 aa12.52□□□□□ -0.41
TP53-203ENST00000413465 SCRN1Q12765 414 aa12.52□□□□□ -0.41
TP53-203ENST00000413465 C8orf34Q49A92 452 aa12.52□□□□□ -0.41
TP53-203ENST00000413465 C9orf50Q5SZB4 431 aa12.52□□□□□ -0.41
TP53-203ENST00000413465 GDF6Q6KF10 455 aaPredicted RBP12.52□□□□□ -0.41
TP53-203ENST00000413465 DAGLBQ8NCG7 672 aa12.52□□□□□ -0.41
TP53-203ENST00000413465 AFAP1L1Q8TED9 768 aa12.52□□□□□ -0.41
TP53-203ENST00000413465 PCMTD1Q96MG8 357 aaPredicted RBP12.52□□□□□ -0.41
TP53-203ENST00000413465 WNT8AQ9H1J5 351 aa12.52□□□□□ -0.41
TP53-203ENST00000413465 HDAC6Q9UBN7 1215 aa12.52□□□□□ -0.41
TP53-203ENST00000413465 SLC9A2Q9UBY0 812 aa12.52□□□□□ -0.41
TP53-203ENST00000413465 PCDHA4Q9UN74 947 aa12.52□□□□□ -0.41
TP53-203ENST00000413465 SCN5AQ14524 2016 aa12.52□□□□□ -0.41
TP53-203ENST00000413465 MYH9P35579 1960 aaKnown RBP12.51□□□□□ -0.41
TP53-203ENST00000413465 SOX1O00570 391 aaPredicted RBP12.51□□□□□ -0.41
TP53-203ENST00000413465 ATP9AO75110 1047 aa12.51□□□□□ -0.41
TP53-203ENST00000413465 SEC24BO95487 1268 aa12.51□□□□□ -0.41
TP53-203ENST00000413465 TCF7P36402 384 aaPredicted RBP12.51□□□□□ -0.41
TP53-203ENST00000413465 EPHB4P54760 987 aa12.51□□□□□ -0.41
TP53-203ENST00000413465 CCL23P55773 120 aa12.51□□□□□ -0.41
TP53-203ENST00000413465 SMAD3P84022 425 aaKnown RBP12.51□□□□□ -0.41
TP53-203ENST00000413465 SP4Q02446 784 aa12.51□□□□□ -0.41
TP53-203ENST00000413465 RBL2Q08999 1139 aa12.51□□□□□ -0.41
TP53-203ENST00000413465 PTGDRQ13258 359 aa12.51□□□□□ -0.41
TP53-203ENST00000413465 PTK7Q13308 1070 aa12.51□□□□□ -0.41
TP53-203ENST00000413465 CRYGNQ8WXF5 182 aa12.51□□□□□ -0.41
TP53-203ENST00000413465 SEPT1Q8WYJ6 367 aa12.51□□□□□ -0.41
TP53-203ENST00000413465 TNPO1Q92973 898 aaKnown RBP12.51□□□□□ -0.41
TP53-203ENST00000413465 GTF3C6Q969F1 213 aa12.51□□□□□ -0.41
TP53-203ENST00000413465 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.51□□□□□ -0.411e-6■■□□□ 12.8
TP53-203ENST00000413465 UPF2Q9HAU5 1272 aaKnown RBP12.51□□□□□ -0.41
TP53-203ENST00000413465 TCEAL9Q9UHQ7 104 aa12.51□□□□□ -0.41
TP53-203ENST00000413465 UMODL1Q5DID0 1318 aa12.51□□□□□ -0.41
TP53-203ENST00000413465 EMSYQ7Z589 1322 aa12.51□□□□□ -0.41
TP53-203ENST00000413465 C17orf102A2RUQ5 167 aa12.5□□□□□ -0.41
TP53-203ENST00000413465 ATMINO43313 823 aaPredicted RBP12.5□□□□□ -0.41
TP53-203ENST00000413465 PPFIA3O75145 1194 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms